BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0037.0004.p (204 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001352787.1| cobinamide kinase / conamide phosphate guany... 262 2e-68 ref|YP_001099276.1| bifunctional cobinamide kinase/cobinamide ph... 244 6e-63 ref|YP_003776048.1| bifunctional cobinamide kinase/cobinamide ph... 215 2e-54 ref|NP_638407.1| adenosylcobinamide kinase/adenosylcobinamide-ph... 191 8e-47 gb|AEL08259.1| bifunctional adenosylcobalamin biosynthesis prote... 189 2e-46 >ref|YP_001352787.1| cobinamide kinase / conamide phosphate guanylyltransferase [Janthinobacterium sp. Marseille] gb|ABR88982.1| cobinamide kinase / conamide phosphate guanylyltransferase [Janthinobacterium sp. Marseille] Length = 182 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 131/183 (71%), Positives = 146/183 (79%), Gaps = 3/183 (1%) Query: 19 RTLVFGGARSGKSAQAERLAAAAGKPVIYIATAAVGDDEMAARIALHRQQRSAQYAHWET 78 RTLV GGARSGKSA AE LA A+GKPV+YIATA GD EM RIA HR +R Q W+T Sbjct: 3 RTLVIGGARSGKSAHAEALATASGKPVVYIATAQAGDAEMQLRIAHHRARRDGQ---WQT 59 Query: 79 VEEQLALGDAIARASRPGNVVLVDCLTVWLSNLLFSEPKEYPEIGRIEAPARFAAERERF 138 VEE LALGDAI + SR N++LVDCLTVWLSNLLFSE +E+PE+G I APA F +R F Sbjct: 60 VEETLALGDAIQQYSREDNLILVDCLTVWLSNLLFSENREFPEVGTIAAPAYFTEQRAAF 119 Query: 139 LQALSQAPGDVVLVSNEVGMGIVPQGAISRWFVDEAGRLNQAVAAICERVQFVAAGLPLE 198 LQAL+QA GD++LVSNEVG GIVPQGAISRWFVDEAGRLNQ+VAA CER V AGLPL Sbjct: 120 LQALTQAAGDIILVSNEVGQGIVPQGAISRWFVDEAGRLNQSVAATCERAVLVVAGLPLT 179 Query: 199 LKG 201 LKG Sbjct: 180 LKG 182 >ref|YP_001099276.1| bifunctional cobinamide kinase/cobinamide phosphate guanylyltransferase [Herminiimonas arsenicoxydans] emb|CAL61149.1| Bifunctional adenosylcobalamin biosynthesis protein cobU [Includes: Adenosylcobinamide kinase ; Adenosylcobinamide-phosphate guanylyltransferase ] [Herminiimonas arsenicoxydans] Length = 182 Score = 244 bits (623), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 131/184 (71%), Positives = 144/184 (78%), Gaps = 3/184 (1%) Query: 18 TRTLVFGGARSGKSAQAERLAAAAGKPVIYIATAAVGDDEMAARIALHRQQRSAQYAHWE 77 TRTLV GGARSGKSA AE LA AAGKPV+YIATA GD EM ARIA HR +R + HW Sbjct: 2 TRTLVIGGARSGKSAHAEALATAAGKPVVYIATAQAGDAEMQARIAHHRARRDS---HWV 58 Query: 78 TVEEQLALGDAIARASRPGNVVLVDCLTVWLSNLLFSEPKEYPEIGRIEAPARFAAERER 137 TVEE L LG AI + S P N+V+VDCLTVWLSNLLF+E ++PEIG I+APA F +R Sbjct: 59 TVEEVLTLGAAIEKHSTPDNLVMVDCLTVWLSNLLFAEKNQFPEIGAIDAPACFTEQRAA 118 Query: 138 FLQALSQAPGDVVLVSNEVGMGIVPQGAISRWFVDEAGRLNQAVAAICERVQFVAAGLPL 197 LQAL QA GDV+LVSNEVG GIVPQGA+SRWFVDEAGRLNQAVAA CER V AGLPL Sbjct: 119 LLQALMQARGDVILVSNEVGQGIVPQGAVSRWFVDEAGRLNQAVAAACERAVLVVAGLPL 178 Query: 198 ELKG 201 LKG Sbjct: 179 ALKG 182 >ref|YP_003776048.1| bifunctional cobinamide kinase/cobinamide phosphate guanylyltransferase [Herbaspirillum seropedicae SmR1] gb|ADJ64140.1| bifunctional enzyme: cobinamide kinase/cobinamide phosphate guanylyltransferase protein [Herbaspirillum seropedicae SmR1] Length = 204 Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 126/199 (63%), Positives = 146/199 (73%), Gaps = 11/199 (5%) Query: 17 TTRTLVFGGARSGKSAQAERLAAAA-------GKPVIYIATA---AVGDD-EMAARIALH 65 T R+L+FGGARSGKSA AERLA AA G ++Y+ATA A GDD EM RI H Sbjct: 6 TRRSLIFGGARSGKSAHAERLALAALASQAQAGGEILYLATASRSASGDDAEMQQRIDQH 65 Query: 66 RQQRSAQYAHWETVEEQLALGDAIARASRPGNVVLVDCLTVWLSNLLFSEPKEYPEIGRI 125 +Q+RS W TVEE LALG A+ ++PG VVLVDCLTVWL+NLLF++ E+P+ G I Sbjct: 66 QQRRSELGGRWRTVEEPLALGAALRTHAQPGQVVLVDCLTVWLANLLFADGIEFPDAGPI 125 Query: 126 EAPARFAAERERFLQALSQAPGDVVLVSNEVGMGIVPQGAISRWFVDEAGRLNQAVAAIC 185 P F +RE FL AL + G+V+LVSNEVGMGIVPQGAISRWFVDEAGRLNQAVAA C Sbjct: 126 VPPPAFTRQREDFLLALQEVRGEVILVSNEVGMGIVPQGAISRWFVDEAGRLNQAVAAQC 185 Query: 186 ERVQFVAAGLPLELKGRAC 204 ERVQ+VAAGLPL LK C Sbjct: 186 ERVQWVAAGLPLSLKDLPC 204 >ref|NP_638407.1| adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] ref|YP_242188.1| adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase [Xanthomonas campestris pv. campestris str. 8004] ref|YP_001902541.1| adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase [Xanthomonas campestris pv. campestris str. B100] gb|AAM42331.1| adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Xanthomonas campestris pv. campestris str. ATCC 33913] gb|AAY48168.1| adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase [Xanthomonas campestris pv. campestris str. 8004] emb|CAP50483.1| bifunctional adenosylcobalamin biosynthesis protein [Xanthomonas campestris pv. campestris] Length = 173 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 108/185 (58%), Positives = 127/185 (68%), Gaps = 14/185 (7%) Query: 19 RTLVFGGARSGKSAQAERLAAAAGKPVIYIATAAVGDDEMAARIALHRQQRSAQYAHWET 78 R L+ GGARSGKSA AER+AAA+G V+Y+ATA D EMAARIA HR R A HW+ Sbjct: 2 RQLILGGARSGKSAFAERIAAASGLEVVYLATAQAFDGEMAARIAHHRGSRPA---HWQC 58 Query: 79 VEEQLALGDAIARASRPGNVVLVDCLTVWLSNLLFSEPKEYPEIGRIEAPARFAAERERF 138 VEE +AL ++ + PG VLVDCLT+WLSNLL +P+ A FA ERE Sbjct: 59 VEEPIALAASLQAVAAPGRCVLVDCLTLWLSNLL-----GHPD------SAVFAREREAL 107 Query: 139 LQALSQAPGDVVLVSNEVGMGIVPQGAISRWFVDEAGRLNQAVAAICERVQFVAAGLPLE 198 L L Q PG +VLVSNEVG GIVP G ++R FVDEAGRL+QA+A CERV FV AGLP+ Sbjct: 108 LATLGQLPGQLVLVSNEVGQGIVPLGELTRRFVDEAGRLHQALALQCERVVFVVAGLPMV 167 Query: 199 LKGRA 203 LKG A Sbjct: 168 LKGEA 172 >gb|AEL08259.1| bifunctional adenosylcobalamin biosynthesis protein CobP [Xanthomonas campestris pv. raphani 756C] Length = 173 Score = 189 bits (479), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 107/185 (57%), Positives = 125/185 (67%), Gaps = 14/185 (7%) Query: 19 RTLVFGGARSGKSAQAERLAAAAGKPVIYIATAAVGDDEMAARIALHRQQRSAQYAHWET 78 R L+ GGARSGKSA AER+AAA+G V+Y+ATA D EMA RIA HR R A HW+ Sbjct: 2 RQLILGGARSGKSAFAERIAAASGLEVVYLATAQAFDGEMAVRIAHHRGSRPA---HWQC 58 Query: 79 VEEQLALGDAIARASRPGNVVLVDCLTVWLSNLLFSEPKEYPEIGRIEAPARFAAERERF 138 VEE +AL + + PG VLVDCLT+WLSNLL +P+ A FA ERE Sbjct: 59 VEEPIALAATLQAVAAPGRCVLVDCLTLWLSNLL-----GHPD------SAVFAREREAL 107 Query: 139 LQALSQAPGDVVLVSNEVGMGIVPQGAISRWFVDEAGRLNQAVAAICERVQFVAAGLPLE 198 L L Q PG +VLVSNEVG GIVP G ++R FVDEAGRL+QA+A CERV FV AGLP+ Sbjct: 108 LATLGQLPGQLVLVSNEVGQGIVPLGELTRRFVDEAGRLHQALALQCERVVFVVAGLPMV 167 Query: 199 LKGRA 203 LKG A Sbjct: 168 LKGEA 172