BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0035.0015.p         (108 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_576956.1| small multidrug resistance protein [Nitrobacter...   145   2e-33
ref|ZP_02188252.1| small multidrug resistance protein [alpha pro...   144   3e-33
ref|YP_673544.1| small multidrug resistance protein [Mesorhizobi...   143   9e-33
ref|YP_004618219.1| transporter [Ramlibacter tataouinensis TTB31...   143   1e-32
ref|ZP_01047355.1| SugE-like protein, probable drug efflux prote...   142   1e-32

>ref|YP_576956.1| small multidrug resistance protein [Nitrobacter hamburgensis X14]
 gb|ABE62496.1| small multidrug resistance protein [Nitrobacter hamburgensis X14]
          Length = 104

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/104 (69%), Positives = 89/104 (85%)

Query: 3   MAWIILVLAGLFEVAWAVGLKYTDGFTRLLPSVATLAAMAVSVGLLALAVKTLPLSTAYA 62
           MAW +L +AGL EV WA+GLKYT+GFTRL+PSV TLAAMAVS+G+L LA+KTLP+ TAYA
Sbjct: 1   MAWFLLFVAGLMEVGWAIGLKYTEGFTRLVPSVLTLAAMAVSLGMLGLALKTLPMGTAYA 60

Query: 63  IWTGIGAVGAVILGIVLFHESASPARLACLALIIVGIIGLKVVS 106
           +WTGIGAVG  ILGIVLF + A+ ARL C+ LI+ GI+GLK+V+
Sbjct: 61  VWTGIGAVGTAILGIVLFGDPATMARLGCIGLIVAGIVGLKLVT 104


>ref|ZP_02188252.1| small multidrug resistance protein [alpha proteobacterium BAL199]
 gb|EDP64969.1| small multidrug resistance protein [alpha proteobacterium BAL199]
          Length = 106

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 71/106 (66%), Positives = 88/106 (83%)

Query: 3   MAWIILVLAGLFEVAWAVGLKYTDGFTRLLPSVATLAAMAVSVGLLALAVKTLPLSTAYA 62
           MAW+ LV+AG+FE+ WA+GLKYT+GFTRL P+VAT A+M +SV LL LAV+TLP+ TAYA
Sbjct: 1   MAWLTLVVAGVFEIGWAIGLKYTEGFTRLWPTVATAASMTISVVLLGLAVRTLPIGTAYA 60

Query: 63  IWTGIGAVGAVILGIVLFHESASPARLACLALIIVGIIGLKVVSPE 108
           +WTGIG VG   LG+VLF ESA   RLAC+ LIIVGI+GLK+V+P 
Sbjct: 61  VWTGIGTVGTAALGMVLFQESADLLRLACITLIIVGIVGLKLVTPH 106


>ref|YP_673544.1| small multidrug resistance protein [Mesorhizobium sp. BNC1]
 gb|ABG62379.1| small multidrug resistance protein [Chelativorans sp. BNC1]
          Length = 105

 Score =  143 bits (360), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 72/105 (68%), Positives = 86/105 (81%)

Query: 3   MAWIILVLAGLFEVAWAVGLKYTDGFTRLLPSVATLAAMAVSVGLLALAVKTLPLSTAYA 62
           MAW  L  AGLFEV WAVGLKYTDGFTRL P+V T+ +M VS+GLL +A++TLPL TAYA
Sbjct: 1   MAWFALFAAGLFEVGWAVGLKYTDGFTRLWPTVWTILSMIVSLGLLGIALRTLPLGTAYA 60

Query: 63  IWTGIGAVGAVILGIVLFHESASPARLACLALIIVGIIGLKVVSP 107
           IWTG+G +G VILGI+LF ESA   RLAC+ LI+ GIIGLK+V+P
Sbjct: 61  IWTGVGTIGTVILGIMLFGESAEAIRLACIGLIVAGIIGLKLVTP 105


>ref|YP_004618219.1| transporter [Ramlibacter tataouinensis TTB310]
 gb|AEG92200.1| Candidate transporter [Ramlibacter tataouinensis TTB310]
          Length = 105

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/102 (70%), Positives = 88/102 (86%)

Query: 3   MAWIILVLAGLFEVAWAVGLKYTDGFTRLLPSVATLAAMAVSVGLLALAVKTLPLSTAYA 62
           MAW++LV+AGLFEV WA+GLKYT+GFTRL PSV T+AAM VSV LL  A++TLP+ TAYA
Sbjct: 1   MAWLVLVIAGLFEVGWAIGLKYTEGFTRLWPSVGTVAAMVVSVVLLGWAMRTLPVGTAYA 60

Query: 63  IWTGIGAVGAVILGIVLFHESASPARLACLALIIVGIIGLKV 104
           +WTGIGAVG V+LGIVLF E A+ ARLAC+ LI+ GI+GLK+
Sbjct: 61  VWTGIGAVGTVVLGIVLFGEPATVARLACVGLILAGIVGLKI 102


>ref|ZP_01047355.1| SugE-like protein, probable drug efflux protein [Nitrobacter sp.
           Nb-311A]
 gb|EAQ34626.1| SugE-like protein, probable drug efflux protein [Nitrobacter sp.
           Nb-311A]
          Length = 104

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/104 (70%), Positives = 87/104 (83%)

Query: 3   MAWIILVLAGLFEVAWAVGLKYTDGFTRLLPSVATLAAMAVSVGLLALAVKTLPLSTAYA 62
           MAW IL LAGL EV WA+GLKYT+G TRL+PSV TL AMA+S+GLL LA+KTLP+ TAYA
Sbjct: 1   MAWFILFLAGLMEVGWAIGLKYTEGLTRLVPSVLTLTAMAISMGLLGLALKTLPIGTAYA 60

Query: 63  IWTGIGAVGAVILGIVLFHESASPARLACLALIIVGIIGLKVVS 106
           +WTGIGAVG  ILGIVLF + A+ ARLAC+ LI+ GI GLK+V+
Sbjct: 61  VWTGIGAVGTAILGIVLFGDPATMARLACIGLIVAGIAGLKLVT 104