BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0035.0012.p (291 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773784.1| ATPase AAA [Herbaspirillum seropedicae SmR1]... 521 e-146 ref|YP_004754575.1| putative ATP/GTP-binding protein [Collimonas... 502 e-140 ref|YP_001354693.1| hypothetical protein mma_3003 [Janthinobacte... 493 e-137 ref|YP_001101033.1| hypothetical protein HEAR2796 [Herminiimonas... 489 e-136 ref|YP_001858880.1| hypothetical protein Bphy_2662 [Burkholderia... 461 e-128 >ref|YP_003773784.1| ATPase AAA [Herbaspirillum seropedicae SmR1] gb|ADJ61876.1| AAA+ superfamily ATPase protein [Herbaspirillum seropedicae SmR1] Length = 291 Score = 521 bits (1341), Expect = e-146, Method: Compositional matrix adjust. Identities = 252/289 (87%), Positives = 267/289 (92%), Gaps = 2/289 (0%) Query: 1 MTQLDQFLQRAEALLARIESILPQSAT-SVEWDKGVAFRWRRRNGANSGGYLQPVGHISH 59 MTQLDQFLQRAEALLAR+E+ILPQ+A +W+ VAFRWR A GYLQ VGHIS Sbjct: 1 MTQLDQFLQRAEALLARVEAILPQAAAREPDWNAAVAFRWRGAT-AQRPGYLQAVGHISQ 59 Query: 60 IALSDLHNIGPQKEQIDQNTKQFVDGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRL 119 I LSDLHNIGPQKEQIDQNT+QFV+GRPANNVLLTGARGTGKSSLIKACLNQYADRGLRL Sbjct: 60 IGLSDLHNIGPQKEQIDQNTRQFVEGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRL 119 Query: 120 IEVDKDDLHDLPDIVDLVSARPERFIIFCDDLSFEEGESGYKALKVALDGSIAAQSDNVL 179 IEVDKDDLHDL DIV+LV+ARPERFI+FCDDLSFEEGE GYKALKVALDGSIAAQSDNVL Sbjct: 120 IEVDKDDLHDLQDIVELVAARPERFIVFCDDLSFEEGEGGYKALKVALDGSIAAQSDNVL 179 Query: 180 IYATSNRRHLMPERMSDNSTYTHTDDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDYL 239 IYATSNRRHLMPER+SDNSTYTHT+DGDLHPGETVEEKISLSERFGLWVTFYPFKQDD+L Sbjct: 180 IYATSNRRHLMPERLSDNSTYTHTEDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDFL 239 Query: 240 EIVAHWLRHFGCDAAQIESARGDALRWALQRSSRSGRVAWQFSRDYAGK 288 EIVAHWLRHFGC+ AQI AR DALRWALQRSSRSGRVAWQF+RDYAGK Sbjct: 240 EIVAHWLRHFGCNDAQIAEARADALRWALQRSSRSGRVAWQFARDYAGK 288 >ref|YP_004754575.1| putative ATP/GTP-binding protein [Collimonas fungivorans Ter331] gb|AEK63752.1| putative ATP/GTP-binding protein [Collimonas fungivorans Ter331] Length = 305 Score = 502 bits (1293), Expect = e-140, Method: Compositional matrix adjust. Identities = 241/289 (83%), Positives = 262/289 (90%), Gaps = 1/289 (0%) Query: 1 MTQLDQFLQRAEALLARIESILPQSATSVEWDKGVAFRWRRRNGANSGGYLQPVGHISHI 60 MTQLDQFL RAEALL R+ESILPQ+ + +W AFRWR R G ++GGYLQ VGHIS I Sbjct: 15 MTQLDQFLLRAEALLTRLESILPQAKAAPDWQAATAFRWRHR-GGSAGGYLQAVGHISDI 73 Query: 61 ALSDLHNIGPQKEQIDQNTKQFVDGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI 120 ALSDLHNI QK+QIDQNT+QFVDGRPANNVLLTGARGTGKSSLIKACLNQYA +GLRLI Sbjct: 74 ALSDLHNIEVQKQQIDQNTRQFVDGRPANNVLLTGARGTGKSSLIKACLNQYAPQGLRLI 133 Query: 121 EVDKDDLHDLPDIVDLVSARPERFIIFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLI 180 EVDKDDL LPDIVDLV+ RPERFIIFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLI Sbjct: 134 EVDKDDLAALPDIVDLVAERPERFIIFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLI 193 Query: 181 YATSNRRHLMPERMSDNSTYTHTDDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDYLE 240 YATSNRRHL+PERMSDN++Y T+DGDLHPGETVEEKISLSERFGLWV+FYPFKQDDYL+ Sbjct: 194 YATSNRRHLLPERMSDNASYKTTEDGDLHPGETVEEKISLSERFGLWVSFYPFKQDDYLD 253 Query: 241 IVAHWLRHFGCDAAQIESARGDALRWALQRSSRSGRVAWQFSRDYAGKL 289 IV HWL HFGC+A QI ARGDALRWALQR+SRSGRVAWQF+RDYAG++ Sbjct: 254 IVGHWLSHFGCNAEQIAEARGDALRWALQRASRSGRVAWQFARDYAGRM 302 >ref|YP_001354693.1| hypothetical protein mma_3003 [Janthinobacterium sp. Marseille] gb|ABR89734.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 291 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 231/289 (79%), Positives = 262/289 (90%) Query: 1 MTQLDQFLQRAEALLARIESILPQSATSVEWDKGVAFRWRRRNGANSGGYLQPVGHISHI 60 MTQLDQFL RAEALL R+ESILP + + +W+ G+AFRWR+ +G N GYLQPV H+S I Sbjct: 1 MTQLDQFLIRAEALLERLESILPPAVPTPDWNAGIAFRWRKSSGKNGRGYLQPVAHLSPI 60 Query: 61 ALSDLHNIGPQKEQIDQNTKQFVDGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI 120 AL+DLHNIGPQK+QI+QNT+QFV+G PANNVLLTGARGTGKSSLIKACLNQ+AD+GLRLI Sbjct: 61 ALTDLHNIGPQKQQIEQNTRQFVEGVPANNVLLTGARGTGKSSLIKACLNQFADQGLRLI 120 Query: 121 EVDKDDLHDLPDIVDLVSARPERFIIFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLI 180 EVDKDDL DL DIVDLV+ RPERFIIFCDDLSFEEGE GYKALKVALDGSI+AQSDNVLI Sbjct: 121 EVDKDDLGDLADIVDLVAGRPERFIIFCDDLSFEEGEGGYKALKVALDGSISAQSDNVLI 180 Query: 181 YATSNRRHLMPERMSDNSTYTHTDDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDYLE 240 YATSNRRHL+PERMSDN+ Y D+GDLHPGETVEEKISLSERFGLWVTFYPF+QDDYL+ Sbjct: 181 YATSNRRHLLPERMSDNAGYKTDDNGDLHPGETVEEKISLSERFGLWVTFYPFRQDDYLD 240 Query: 241 IVAHWLRHFGCDAAQIESARGDALRWALQRSSRSGRVAWQFSRDYAGKL 289 IVAHWL+HFGC+ QIE AR +AL+WALQR SRSGRVAWQF++D+AGK+ Sbjct: 241 IVAHWLKHFGCNPQQIEEARTEALQWALQRGSRSGRVAWQFAKDHAGKM 289 >ref|YP_001101033.1| hypothetical protein HEAR2796 [Herminiimonas arsenicoxydans] emb|CAL62912.1| Conserved hypothetical protein; putative ATPase of the AAA+ class [Herminiimonas arsenicoxydans] Length = 310 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 231/288 (80%), Positives = 260/288 (90%) Query: 1 MTQLDQFLQRAEALLARIESILPQSATSVEWDKGVAFRWRRRNGANSGGYLQPVGHISHI 60 MTQL+QFL RAEALL R+E+ILP + WD G+AFRWR+ +G + GYLQPV HIS I Sbjct: 20 MTQLEQFLTRAEALLGRLEAILPPAHAVPNWDAGIAFRWRKPSGKDGRGYLQPVAHISPI 79 Query: 61 ALSDLHNIGPQKEQIDQNTKQFVDGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI 120 ALSDLHNIG QK+QI+QNT+QFV+G PANNVLLTGARGTGKSSLIKACLNQYAD+GLRLI Sbjct: 80 ALSDLHNIGTQKQQIEQNTRQFVEGLPANNVLLTGARGTGKSSLIKACLNQYADQGLRLI 139 Query: 121 EVDKDDLHDLPDIVDLVSARPERFIIFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLI 180 EVDK+DL DL DIVDLV+ RPERFIIFCDDLSFEEGE GYKALKVALDGSI+AQSDNVLI Sbjct: 140 EVDKNDLGDLADIVDLVAGRPERFIIFCDDLSFEEGEGGYKALKVALDGSISAQSDNVLI 199 Query: 181 YATSNRRHLMPERMSDNSTYTHTDDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDYLE 240 YATSNRRHL+PERMSDN++Y D+GDLHPGETVEEKISLSERFGLWVTFYPF+QDDYL+ Sbjct: 200 YATSNRRHLLPERMSDNASYKTDDNGDLHPGETVEEKISLSERFGLWVTFYPFRQDDYLD 259 Query: 241 IVAHWLRHFGCDAAQIESARGDALRWALQRSSRSGRVAWQFSRDYAGK 288 IVAHWL HFGC+A QIE+AR +AL+WALQR SRSGRVAWQF++D+AGK Sbjct: 260 IVAHWLTHFGCNAQQIEAARTEALQWALQRGSRSGRVAWQFAKDHAGK 307 >ref|YP_001858880.1| hypothetical protein Bphy_2662 [Burkholderia phymatum STM815] gb|ACC71834.1| protein of unknown function DUF815 [Burkholderia phymatum STM815] Length = 289 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 220/288 (76%), Positives = 247/288 (85%), Gaps = 3/288 (1%) Query: 1 MTQLDQFLQRAEALLARIESILPQSATSVEWDKGVAFRWRRRNGANSGGYLQPVGHISHI 60 M +L+QFL RAEA+L R+E++LP +A ++W VAFRWR+R G GYLQPV IS I Sbjct: 1 MDKLEQFLTRAEAVLVRLEAMLPPAAPEIDWSAAVAFRWRKRQGR---GYLQPVPAISLI 57 Query: 61 ALSDLHNIGPQKEQIDQNTKQFVDGRPANNVLLTGARGTGKSSLIKACLNQYADRGLRLI 120 +L DL NI QK I+QNTKQFV +PANNVLLTGARGTGKSSLIKACLN Y+ GLRLI Sbjct: 58 SLDDLQNIDRQKNLIEQNTKQFVKKQPANNVLLTGARGTGKSSLIKACLNAYSKDGLRLI 117 Query: 121 EVDKDDLHDLPDIVDLVSARPERFIIFCDDLSFEEGESGYKALKVALDGSIAAQSDNVLI 180 EVDKDDLHDL DIVDL+SARPERFI+FCDDLSFEEGESGYKALKVALDGS+AAQSDNVLI Sbjct: 118 EVDKDDLHDLGDIVDLISARPERFIVFCDDLSFEEGESGYKALKVALDGSVAAQSDNVLI 177 Query: 181 YATSNRRHLMPERMSDNSTYTHTDDGDLHPGETVEEKISLSERFGLWVTFYPFKQDDYLE 240 YATSNRRHL+PE MSDN TY HT DG++HPGE VEEKISLSERFGLWV+FYPFKQDDYL Sbjct: 178 YATSNRRHLLPEYMSDNETYKHTSDGEIHPGEVVEEKISLSERFGLWVSFYPFKQDDYLS 237 Query: 241 IVAHWLRHFGCDAAQIESARGDALRWALQRSSRSGRVAWQFSRDYAGK 288 IVAHWL HFGC A +E+ARGDAL WAL+R SRSGRVAWQF+RD++GK Sbjct: 238 IVAHWLHHFGCSDADVETARGDALIWALERGSRSGRVAWQFARDWSGK 285