BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0434.p (744 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004514293.1| multi-sensor hybrid histidine kinase [Methyl... 493 e-137 ref|ZP_07332538.1| multi-sensor hybrid histidine kinase [Desulfo... 370 e-100 gb|EGW60149.1| multi-sensor hybrid histidine kinase [Dechlorosom... 350 6e-94 ref|YP_003443339.1| multi-sensor hybrid histidine kinase [Alloch... 315 2e-83 emb|CAM77427.1| PAS [Magnetospirillum gryphiswaldense MSR-1] 312 2e-82 >ref|YP_004514293.1| multi-sensor hybrid histidine kinase [Methylomonas methanica MC09] gb|AEG01794.1| multi-sensor hybrid histidine kinase [Methylomonas methanica MC09] Length = 1266 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 275/676 (40%), Positives = 399/676 (59%), Gaps = 25/676 (3%) Query: 1 MAQNFSTLMLRNPYYDQVRWIDQDGVEKVRVNMTSRGPVPASVPTLQNKKDRPYFTDTMA 60 M + F +LM RN YD+VRWID+ G E +RVN P LQNK+DR +F M Sbjct: 111 MQEAFLSLMSRNSDYDKVRWIDEQGYELIRVNNRQGRPYLVPKSQLQNKRDRYFFISAMQ 170 Query: 61 LQRGEMLVSPMDLNVENGRIEVPHKPTVRLAMAVASADGKPGGIIIINVLMAPLLDRFSN 120 L G + +SP+DLN++NG+IEVP+KPT+R+A V A G GI+IIN+ +L+ F Sbjct: 171 LDAGVIYISPLDLNMDNGQIEVPYKPTLRVASRVFDAAGNARGILIINIAARTMLNAFIG 230 Query: 121 QVERGANRAMLLNGDGYWLYSTNSADEWAFMFKREETLAKRHPNVWKAIAAQASGTMS-E 179 ANR ML+N DGYWL + + ADEW FMF+R TL R+P W+ I+ Q+ G + Sbjct: 231 SAGPAANRLMLINADGYWLKNPDPADEWGFMFQRNITLGSRYPQAWEIISKQSKGQIRLA 290 Query: 180 QGIWSWQRVALDASTGRYGLHQQSPWTVVLYLPEKRVQVDNYSILLRLCLFVGLILLALA 239 G+W+W V+ L + W + ++P R+ + + ++L+ + Sbjct: 291 DGLWTWSSVS-PMPKFETSLSHKIYWRAITHIPSSRLVAMETPVWREKIIGAAIVLILVG 349 Query: 240 MLSWQLASNRHRREAAVHDRLKAEAELSVSEKRVADLLQHQETRSILSSIVASSEDAIIG 299 +R + A + + +A L+ SE + A LQ E ++ + ++ + ++ Sbjct: 350 -----FGLSRLIQAKAAKVQAEKDATLARSEAQAAHKLQ--EVQASFRMLFEANTNGLLV 402 Query: 300 TGLDDVINSWNPAAEKLFGYLSREVLNQSAYILVPPERNSEARHITDQIMEGKT-----V 354 I NPA E +FGY E+ NQS +L+P ++ + M T V Sbjct: 403 VNESGKITMTNPAFESMFGYAIDELRNQSVEVLIPEALRTQHAQMRAGYMRQPTKRAMGV 462 Query: 355 ANFETVRWHKDGRLLDISVTVSPILDGDKKIAGISYIARDITNHKRLEKELNQYRQHLEG 414 + R KDG I + +SP D ++++ ++ I DI+ KR + E+ + + LE Sbjct: 463 RDLYGTR--KDGSAFPIEIGLSPYWD-NRQLFVLATIT-DISERKRAQDEIVRINEALEQ 518 Query: 415 LVEQQTRTLRDTNSNLELALTKSESATRAKSSFLSNMSHEIRTPMNAVLGLTYLLEKTVL 474 VE++T + L A ++E K +FL+NMSHEIRTPMNA+LGL YLLEK + Sbjct: 519 RVEERT-------AELLAAQREAERLASVKGNFLANMSHEIRTPMNAILGLAYLLEKAPI 571 Query: 475 QSDQRDLVRKIIVAGHSLLGIINDILDVSKIEAGRLEVEHVPFRLSTVLENVVNVTAPGI 534 ++ DLV+KI +AG SLL IINDILD SKIE+GRLE+EH PFRL+ VL+NV + + Sbjct: 572 DAEALDLVKKIRIAGRSLLSIINDILDFSKIESGRLEIEHAPFRLTDVLDNVATLMSAVE 631 Query: 535 GDKDVELVVGFNDVGVEYLYGDALRLEQILTNLTSNAIKFTAHGEISIHVAVVSEIGDRV 594 DVEL +G G+++L GDALRLEQ++ NLTSNA+KFT HG +++ V + Sbjct: 632 YKTDVELAMGPAPKGMKFLRGDALRLEQVMVNLTSNALKFTEHGSVTLTVEQAPSRNGQA 691 Query: 595 MLRFAVTDSGIGIPPERQQDIFQAFTQEDTSTTRRYGGTGLGLTICRHLVQLMNGEIGVA 654 LRF+V D+G GI ++Q +IF AF+QED+STTRR+GGTGLGL+ICRHLV+LM GEIGV Sbjct: 692 YLRFSVKDTGKGIATDKQTEIFNAFSQEDSSTTRRFGGTGLGLSICRHLVELMGGEIGVD 751 Query: 655 SEPGQGSQFWFMLPFQ 670 SE G+GS+FWF++P + Sbjct: 752 SELGKGSEFWFIVPVE 767 >ref|ZP_07332538.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans JJ] gb|EFL52193.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans JJ] Length = 1229 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 237/669 (35%), Positives = 347/669 (51%), Gaps = 70/669 (10%) Query: 12 NPYYDQVRWIDQDGVEKVRVNMTSRGP--VPASVPTLQNKKDRPYFTDTMALQRGEMLVS 69 NP YDQ+R + ++G E +R+N P VP + LQ K DR YF +++ L G++ S Sbjct: 102 NPQYDQLRLLTKEGQEILRINNKDGQPWIVPGN--ELQIKSDRFYFKNSVDLSLGKIYTS 159 Query: 70 PMDLNVENGRIEVPHKPTVRLAMAVASADGKPGGIIIINVLMAPLLDRFSNQVERGANRA 129 P+DLN+E G++E+P+KP +RLA + +A G+ ++++N L LL + N++E Sbjct: 160 PLDLNMEFGKLELPYKPMLRLAAPLRNAKGEVDAVLVLNYLGDVLLKKLHNRLEFAGQTV 219 Query: 130 MLLNGDGYWLYSTNSADEWAFMFKRE--ETLAKRHPNVWKAIAAQASG-TMSEQGIWSWQ 186 MLLN DGYWL+ D WAFMF T HP +W+ I A SG + G++++ Sbjct: 220 MLLNQDGYWLHGGGEND-WAFMFPERVAHTFEASHPELWRVINATPSGQVLGPDGLYTFA 278 Query: 187 RVAL--------DASTGRYGLHQQSPWTVVLYLPEKRVQVDNYSILLRLCLFVGLILLAL 238 + L D G + W VV P + + L+LL L Sbjct: 279 TIVLTPDRLPGSDVHRGEVPEQYRQTWKVVSLTPNAVLAQVRWRQWPLYASASALVLL-L 337 Query: 239 AMLSWQLASNRHRREAAVHDRLKAEAELSVSEKRVADLLQHQETRSILSSIVASSEDAII 298 A++ L ++R + +R A L+VSE R +V +S D I Sbjct: 338 AVIGAYLHASR------MLERQDAAQALAVSEAR-------------FRGLVETSPDLIW 378 Query: 299 GTGLDDVINSWNPAAEKLFGYLSREVLNQSAYILVPPERNSEARHITDQIMEGKTVANFE 358 T +D V+ +P A +LFG ++ + +PP +A T + E E Sbjct: 379 ETDMDGVVTYASPRAAELFGEPPNALVGKKMAQFIPPA--GDAPEDTPETWEATLPGAGE 436 Query: 359 TVRWHKDGRLLDISVTVSPILDGDKKIAGISYIARDITNHKRLEKELNQYRQHLEGLVEQ 418 G+ L++S +G+ G +ARDIT K + L+ RQ Sbjct: 437 G-----GGKALEVSCVPRRTPEGEA--LGRRGVARDITERKNAQCLLDAARQ-------- 481 Query: 419 QTRTLRDTNSNLELALTKSESATRAKSSFLSNMSHEIRTPMNAVLGLTYLLEKTVLQSDQ 478 ++ A +AKS FL+ MSHEIRTP+NAV+G+++L KT L Q Sbjct: 482 -----------------EAVRANQAKSEFLARMSHEIRTPLNAVIGMSHLALKTELTPRQ 524 Query: 479 RDLVRKIIVAGHSLLGIINDILDVSKIEAGRLEVEHVPFRLSTVLENVVNVTAPGIGDKD 538 D + KI + +LL +INDILD SKIEAGR +E +PF L VL NVV++ PG +K Sbjct: 525 EDYLTKIRSSADTLLAVINDILDYSKIEAGRFVIERIPFDLDAVLGNVVDIMGPGAAEKQ 584 Query: 539 VELVVGFNDVGVEYLYGDALRLEQILTNLTSNAIKFTAHGEISIHVAVVSEIGDRVMLRF 598 +E ++ D +L GD LRL Q+L NL NA+KFT GE+ + V + + D LRF Sbjct: 585 LEFLLSVGDDVPSWLVGDPLRLGQVLLNLVGNAVKFTDSGEVLVEVRLEKAVADAARLRF 644 Query: 599 AVTDSGIGIPPERQQDIFQAFTQEDTSTTRRYGGTGLGLTICRHLVQLMNGEIGVASEPG 658 AV D+GIG+ PE++ ++F+ F Q D S +RRYGGTGLGL+IC LV+LM G + V S G Sbjct: 645 AVRDTGIGMTPEQKHNLFRPFAQADGSISRRYGGTGLGLSICHRLVELMGGNLAVESVSG 704 Query: 659 QGSQFWFML 667 QGS+F+F L Sbjct: 705 QGSEFYFSL 713 >gb|EGW60149.1| multi-sensor hybrid histidine kinase [Dechlorosoma suillum PS] Length = 940 Score = 350 bits (898), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 192/425 (45%), Positives = 264/425 (62%), Gaps = 15/425 (3%) Query: 268 VSEKRVADLLQHQETRSILSSIVASSEDAIIGTGLDDVINSWNPAAEKLFGYLSREVLNQ 327 V+E R A+ + Q +IV SS+DAI+ LD ++ SWN AE+LFGY + E++ + Sbjct: 402 VTESRQAERIARQ-----YEAIVRSSDDAILSKTLDGIVTSWNRGAEELFGYSAAEMVGR 456 Query: 328 SAYILVPPERNSEARHITDQIMEGKTVANFETVRWHKDGRLLDISVTVSPILDGDKKIAG 387 S L PPE +E R I +++ G+TV +F+T R KDGR++D+SVT+SP+LDG+ ++ G Sbjct: 457 STLHLFPPECLAEERDILERLRRGETVKHFDTRRIRKDGRIVDVSVTISPLLDGEGRVLG 516 Query: 388 ISYIARDITNHKRLEKELNQYRQHLEGLVEQQTRTLRDTNSNLELALTKSESATRAKSSF 447 IS IARDIT K E EL ++RQ LE LV+++TR L + +ESA AKS+F Sbjct: 517 ISKIARDITARKAAEAELQRHRQRLEELVQERTRQLEELKD-------AAESANVAKSAF 569 Query: 448 LSNMSHEIRTPMNAVLGLTYLLEKTVLQSDQRDLVRKIIVAGHSLLGIINDILDVSKIEA 507 L+NMSHEIRTP+NA+ GLT+L+ + L+ Q + + K+ A LLG+IN ILD+SKIEA Sbjct: 570 LANMSHEIRTPLNAMTGLTHLIRRAGLKPQQAEHMDKLEAAAQHLLGVINAILDLSKIEA 629 Query: 508 GRLEVEHVPFRLSTVLENVVNVTAPGIGDKDVELVVGFNDVGVEYLYGDALRLEQILTNL 567 G+ +E P R+ ++L NV + + K + L + +L GD RL+Q L N Sbjct: 630 GKFALEEAPVRVESLLGNVASFLQERVQAKGLVLRTEAQPL-PPHLLGDPTRLQQALLNY 688 Query: 568 TSNAIKFTAHGEISIHVAVVSEIGDRVMLRFAVTDSGIGIPPERQQDIFQAFTQEDTSTT 627 NA+KFT G I++ V + E +LRF V D+GIGIPPE +F AF Q D STT Sbjct: 689 AGNALKFTEQGSITLRVHTLEEGEADALLRFEVQDTGIGIPPEAMHKLFSAFEQADNSTT 748 Query: 628 RRYGGTGLGLTICRHLVQLMNGEIGVASEPGQGSQFWFMLPFQALPPAAAXFCSSPVAGG 687 RRYGGTGLGL I R L QLM GE G +SEPG+GS FWF + +P+AGG Sbjct: 749 RRYGGTGLGLAITRKLAQLMGGEAGASSEPGRGSTFWFTARLKKGKERYGN--GAPLAGG 806 Query: 688 RSAVR 692 + R Sbjct: 807 NAEQR 811 >ref|YP_003443339.1| multi-sensor hybrid histidine kinase [Allochromatium vinosum DSM 180] gb|ADC62307.1| multi-sensor hybrid histidine kinase [Allochromatium vinosum DSM 180] Length = 1650 Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 182/409 (44%), Positives = 255/409 (62%), Gaps = 18/409 (4%) Query: 268 VSEKRVADLLQHQETRSILSSIVASSEDAIIGTGLDDVINSWNPAAEKLFGYLSREVLNQ 327 +KR+ L+ E+R +V + I+ D +I N A + FGY + E++ + Sbjct: 873 TDQKRMEQALKDSESR--YRDLVENVNSVILRLAPDGLIAFANEYALRFFGYAAEELIGR 930 Query: 328 SAYILVPPERNSEARHITDQIMEGKTVANFETVRWH------KDGRLLDISVTVSPILDG 381 +LVP +S ++++ + E +AN E H DGR + ++ T + D Sbjct: 931 PVTVLVP-TVDSTGQNLSAMVQE--ILANSERYVHHINENLCHDGRRVWMAWTNKALYDD 987 Query: 382 DKKIAGISYIARDITNHKRLEKELNQYRQHLEGLVEQQTRTLRDTNSNLELALTKSESAT 441 ++ G+ + DIT +RLE+EL+++R+HLE LV+++T + L A ++E+A Sbjct: 988 RGRLIGVLAVGNDITERRRLEQELDRHRRHLEALVDERT-------AQLTEARARAEAAN 1040 Query: 442 RAKSSFLSNMSHEIRTPMNAVLGLTYLLEKTVLQSDQRDLVRKIIVAGHSLLGIINDILD 501 +AKS+FL+NMSHEIRTPMNAVLG YLLE+ L DLVRKI AG +LL +INDILD Sbjct: 1041 QAKSAFLANMSHEIRTPMNAVLGFCYLLEQHALDPASADLVRKIHNAGQALLDLINDILD 1100 Query: 502 VSKIEAGRLEVEHVPFRLSTVLENVVNVTAPGIGDKDVELVVGFNDVGVEYLYGDALRLE 561 SKIEAGRLE+E PFRLS +L+ + + GDK +EL++ + +E L GDA RL Sbjct: 1101 FSKIEAGRLELEAAPFRLSELLDTLAGIMTAAAGDKPLELILTPPEADIEGLIGDAGRLR 1160 Query: 562 QILTNLTSNAIKFTAHGEISIHVAVVSEIGDRVMLRFAVTDSGIGIPPERQQDIFQAFTQ 621 Q+L NL NAIKFTA GE+ + + ++E D V LRFAV D+GIGI PE Q+ +FQ FTQ Sbjct: 1161 QVLINLLGNAIKFTARGEVELRIECLAEHDDAVELRFAVRDTGIGIDPESQERLFQPFTQ 1220 Query: 622 EDTSTTRRYGGTGLGLTICRHLVQLMNGEIGVASEPGQGSQFWFMLPFQ 670 D STTRR+GGTGLGL+I R LV+LM G + + S+PGQGS F F L Q Sbjct: 1221 ADVSTTRRFGGTGLGLSISRQLVRLMGGTLEIESQPGQGSTFHFSLCLQ 1269 >emb|CAM77427.1| PAS [Magnetospirillum gryphiswaldense MSR-1] Length = 1382 Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 180/411 (43%), Positives = 242/411 (58%), Gaps = 32/411 (7%) Query: 273 VADLLQHQETRSILS---SIVASSEDAIIGTGLDDVINSWNPAAEKLFGYLSREVLNQSA 329 V D+ + + SI + +I+ +S DAI+ LD ++ SWNPAAE LFGY + E++ Sbjct: 403 VRDITERKSIASIQARYMAIIEASSDAIMSKSLDGIVTSWNPAAEALFGYTAEEMIGTPM 462 Query: 330 YILVPPERNSEARHITDQIMEGKTVANFETVRWHKDGRLLDISVTVSPILDGDKKIAGIS 389 L+PP R E I +I G+ + +FET R K+G++ ISVT+SPI D + G S Sbjct: 463 SRLIPPGREDEEAQILARIRRGEYIDHFETFRQRKNGQVFPISVTLSPIRDETGTLMGAS 522 Query: 390 YIARDITNHKRLEKELNQYRQHLEGLVEQQTRTLRDTNSNLELALTKSESATRAKSSFLS 449 IARDIT K+ E+E TR LA +E A R KS FL+ Sbjct: 523 KIARDITERKQAEEE---------------TR----------LARIAAEEANRTKSDFLA 557 Query: 450 NMSHEIRTPMNAVLGLTYLLEKTVLQSDQRDLVRKIIVAGHSLLGIINDILDVSKIEAGR 509 NMSHEIRTPMNA++G+T+L ++T Q+ + KI A +LLGIINDILD SKIEAG+ Sbjct: 558 NMSHEIRTPMNAIIGMTHLAQRTNPTPKQKGYLTKIGNAAEALLGIINDILDFSKIEAGK 617 Query: 510 LEVEHVPFRLSTVLENVVNVTAPGIGDKDVELVVGFNDVGVEYLYGDALRLEQILTNLTS 569 L++E +PF L VL N+V++ G K VE+V+ L GD LRL QIL NL + Sbjct: 618 LDLESIPFSLDDVLGNLVDMVGIKAGQKGVEVVLAVAPDVPRTLIGDPLRLGQILINLAN 677 Query: 570 NAIKFTAHGEISIHVAVVSEIGDRVMLRFAVTDSGIGIPPERQQDIFQAFTQEDTSTTRR 629 NA+KFT GEI I V +I L +V D+GIG+ E+ ++F +F Q DTS TR+ Sbjct: 678 NAVKFTDKGEIIIRVVNAPDIPTAGRLMVSVRDTGIGMTSEQVSNLFHSFNQADTSITRK 737 Query: 630 YGGTGLGLTICRHLVQLMNGEIGVASEPGQGSQFWFMLPF----QALPPAA 676 YGGTGLGL I + L ++M G + V SEPG+GS F F F +ALP A Sbjct: 738 YGGTGLGLAISKQLCEMMGGTVCVESEPGKGSTFIFTAQFGVSDEALPVTA 788