BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0407.p (480 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003778129.1| FAD-dependent dehydrogenase [Herbaspirillum ... 843 0.0 ref|YP_004754724.1| NAD(FAD)-utilizing dehydrogenase [Collimonas... 793 0.0 ref|YP_001351772.1| hypothetical protein mma_0082 [Janthinobacte... 785 0.0 emb|CAL60314.2| Putative FAD-dependent pyridine nucleotide-disul... 758 0.0 ref|YP_001098443.1| putative FAD-dependent pyridine nucleotide-d... 755 0.0 >ref|YP_003778129.1| FAD-dependent dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ66221.1| FAD-dependent dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 535 Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/475 (86%), Positives = 449/475 (94%) Query: 1 VRDEAAVLARHKGKQNIVPTPDTNYHFVARAPAGLSKRPIVIGTGPCGIFAGLILAEMGF 60 ++DEAAVLAR+ +N+ PTPDT+YH+V RAPA L KRP+VIG GPCG+FA LILAEMGF Sbjct: 61 LKDEAAVLARYAKARNVGPTPDTSYHYVTRAPATLKKRPVVIGFGPCGLFAALILAEMGF 120 Query: 61 NPLILERGKTVRERTKDTWGLWRQRELKPESNVQYGEGGAGTFSDGKLYSQVKDPKHYGR 120 NP+ILERGKTVRERTKDTWGLWRQRELKPESNVQ+GEGGAGTFSDGKLYSQVKDPKHYGR Sbjct: 121 NPIILERGKTVRERTKDTWGLWRQRELKPESNVQFGEGGAGTFSDGKLYSQVKDPKHYGR 180 Query: 121 KVLTEFVAADAPPEIMYVSKPHIGTFRLVKMVQLMREKIVALGGEFRFEQRVDDLVIEDG 180 KVL+EFVAADAPPEIMYVSKPHIGTFRLVKM+QLMR+KI LGGEFRFEQRV+D++IEDG Sbjct: 181 KVLSEFVAADAPPEIMYVSKPHIGTFRLVKMIQLMRDKIEKLGGEFRFEQRVEDVLIEDG 240 Query: 181 QVRGVTLAGGEHIEADHVVLAIGHSARDTFQMLYDRGVYMEAKPFSIGFRAEHPQSLIDK 240 ++RG+TLA GE IEADHVVLAIGHSARDTF+MLY+RGVY+EAKPFSIGFRAEHPQSLIDK Sbjct: 241 KIRGLTLASGEQIEADHVVLAIGHSARDTFEMLYERGVYIEAKPFSIGFRAEHPQSLIDK 300 Query: 241 CRFGPSAGHPILGAADYKLVHHASNGRSVYSFCMCPGGTVVAASSEPERVVTNGMSQYSR 300 CRFGPSAGHPILGAADYKLVHHASNGRSVYSFCMCPGGTVVAA+SEP RVVTNGMSQYSR Sbjct: 301 CRFGPSAGHPILGAADYKLVHHASNGRSVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSR 360 Query: 301 NERNANSGIVVGISPADYPGHPLAGIEFQRKWESRAYELGGRNYDAPGQLVGDFLAKKPS 360 NERNANSGIVVGISPADYPGHPLAGI FQR+WESRAYELGG NY+APGQLVGDF+A +PS Sbjct: 361 NERNANSGIVVGISPADYPGHPLAGIAFQREWESRAYELGGGNYNAPGQLVGDFIANRPS 420 Query: 361 TQLGSVIPSYKPGVLLGDLDQSLPDYAIDAIRESLPFFDKQIRGYAMHDAVLTGVETRTS 420 TQLGSV PSYKPGV LGDL+ SLP YAIDAIRE+LP FDKQIRGY+MHDAVLTG+ETRTS Sbjct: 421 TQLGSVEPSYKPGVSLGDLNPSLPKYAIDAIREALPAFDKQIRGYSMHDAVLTGIETRTS 480 Query: 421 SPVRIRRNDDTLQSLNTKGLYPAGEGAGYAGGIMSASIDGIKVAEAVALAIMGST 475 SP+RI+R+D TLQSLNTKGLYPAGEGAGYAGGIMSA+IDGI+VAEA+AL I+ + Sbjct: 481 SPIRIKRDDHTLQSLNTKGLYPAGEGAGYAGGIMSAAIDGIRVAEALALDIVAQS 535 >ref|YP_004754724.1| NAD(FAD)-utilizing dehydrogenase [Collimonas fungivorans Ter331] gb|AEK63901.1| NAD(FAD)-utilizing dehydrogenase [Collimonas fungivorans Ter331] Length = 539 Score = 793 bits (2047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/476 (81%), Positives = 431/476 (90%), Gaps = 4/476 (0%) Query: 1 VRDEAAVLARHKGKQNIVPTPDTNYHFVARAPAGLSKRPIVIGTGPCGIFAGLILAEMGF 60 ++DE AVL R + + PTPDTNY FVA+AP+ L RP+VIGTGPCG+FAGLILA+MGF Sbjct: 61 LKDEDAVLKRLARDRTVAPTPDTNYRFVAQAPSQLKSRPVVIGTGPCGLFAGLILAQMGF 120 Query: 61 NPLILERGKTVRERTKDTWGLWRQRELKPESNVQYGEGGAGTFSDGKLYSQVKDPKHYGR 120 NP+ILERGK VRERTKDTWGLWR+REL+PESNVQ+GEGGAGTFSDGKL++Q+KDPKHYGR Sbjct: 121 NPIILERGKAVRERTKDTWGLWRKRELQPESNVQFGEGGAGTFSDGKLWTQIKDPKHYGR 180 Query: 121 KVLTEFVAADAPPEIMYVSKPHIGTFRLVKMVQLMREKIVALGGEFRFEQRVDDLVIE-- 178 KVLTEFV ADAP EIMYVSKPHIGTFRLVKMV+ MR I ALGGEFRF+Q+V+D+ IE Sbjct: 181 KVLTEFVKADAPDEIMYVSKPHIGTFRLVKMVEQMRASIEALGGEFRFQQKVEDIDIEWK 240 Query: 179 --DGQVRGVTLAGGEHIEADHVVLAIGHSARDTFQMLYDRGVYMEAKPFSIGFRAEHPQS 236 GQVR V LAGGE I DHVVLAIGHSARDTFQMLYDRGVY+EAKPFS+GFR EHPQS Sbjct: 241 NDSGQVRAVVLAGGETIVTDHVVLAIGHSARDTFQMLYDRGVYIEAKPFSLGFRIEHPQS 300 Query: 237 LIDKCRFGPSAGHPILGAADYKLVHHASNGRSVYSFCMCPGGTVVAASSEPERVVTNGMS 296 LIDKCRFGPSAGHPILGAADYKLVHH NGR+VYSFCMCPGGTVVAA+SEP RVVTNGMS Sbjct: 301 LIDKCRFGPSAGHPILGAADYKLVHHCENGRAVYSFCMCPGGTVVAATSEPGRVVTNGMS 360 Query: 297 QYSRNERNANSGIVVGISPADYPGHPLAGIEFQRKWESRAYELGGRNYDAPGQLVGDFLA 356 QYSRNERNANSGIVVGI+PADYPGHPLAGI+FQR+WESRA+ELGG YDAPGQLVGDF+A Sbjct: 361 QYSRNERNANSGIVVGITPADYPGHPLAGIDFQRQWESRAFELGGGTYDAPGQLVGDFIA 420 Query: 357 KKPSTQLGSVIPSYKPGVLLGDLDQSLPDYAIDAIRESLPFFDKQIRGYAMHDAVLTGVE 416 +PST LGSV PSYKPGVLLGDL +LPDYAI AIRE+LP FDKQIRG+AM DAVLTGVE Sbjct: 421 GRPSTALGSVTPSYKPGVLLGDLSTALPDYAIAAIREALPAFDKQIRGFAMTDAVLTGVE 480 Query: 417 TRTSSPVRIRRNDDTLQSLNTKGLYPAGEGAGYAGGIMSASIDGIKVAEAVALAIM 472 TRTSSPVRI+R+DD+LQSLNT GL+PAGEGAGYAGGIMSA+IDGI+VAEAVAL+++ Sbjct: 481 TRTSSPVRIKRHDDSLQSLNTTGLFPAGEGAGYAGGIMSAAIDGIRVAEAVALSML 536 >ref|YP_001351772.1| hypothetical protein mma_0082 [Janthinobacterium sp. Marseille] gb|ABR89625.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 541 Score = 785 bits (2027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/474 (80%), Positives = 432/474 (91%) Query: 1 VRDEAAVLARHKGKQNIVPTPDTNYHFVARAPAGLSKRPIVIGTGPCGIFAGLILAEMGF 60 V++EA V R G +++ PTPDT+YHFVA+APAGL RP+VIGTGPCGIFAGLILA+MGF Sbjct: 61 VKNEAKVQKRLAGNRHVGPTPDTSYHFVAQAPAGLKMRPVVIGTGPCGIFAGLILAQMGF 120 Query: 61 NPLILERGKTVRERTKDTWGLWRQRELKPESNVQYGEGGAGTFSDGKLYSQVKDPKHYGR 120 NP+ILERGK VRERTKDT+GLWRQREL PESNVQ+GEGGAGTFSDGKL+SQVKDPKHYGR Sbjct: 121 NPIILERGKAVRERTKDTFGLWRQRELHPESNVQFGEGGAGTFSDGKLWSQVKDPKHYGR 180 Query: 121 KVLTEFVAADAPPEIMYVSKPHIGTFRLVKMVQLMREKIVALGGEFRFEQRVDDLVIEDG 180 KVLTEFV ADAP EIMYVSKPHIGTFRLVKMV+LMR I LGGEFRF+ +VDD+ IEDG Sbjct: 181 KVLTEFVKADAPDEIMYVSKPHIGTFRLVKMVELMRASIEELGGEFRFQSKVDDIEIEDG 240 Query: 181 QVRGVTLAGGEHIEADHVVLAIGHSARDTFQMLYDRGVYMEAKPFSIGFRAEHPQSLIDK 240 QVRG+ LA G HI DHVVLAIGHSARDTFQML+ RGVY+E KPFS+GFR EHPQSLID+ Sbjct: 241 QVRGLKLADGTHIATDHVVLAIGHSARDTFQMLHARGVYIEPKPFSMGFRIEHPQSLIDR 300 Query: 241 CRFGPSAGHPILGAADYKLVHHASNGRSVYSFCMCPGGTVVAASSEPERVVTNGMSQYSR 300 CRFGP+AG+ ILGAADYKLVHHA NGRSVYSFCMCPGGTVVAA+SEP RVVTNGMSQYSR Sbjct: 301 CRFGPNAGNEILGAADYKLVHHAKNGRSVYSFCMCPGGTVVAATSEPGRVVTNGMSQYSR 360 Query: 301 NERNANSGIVVGISPADYPGHPLAGIEFQRKWESRAYELGGRNYDAPGQLVGDFLAKKPS 360 NERNAN+GIVVGI+PADYPGH LAG+EFQR+WE+RA+ELGG NYDAPGQLVGDF+A +PS Sbjct: 361 NERNANAGIVVGITPADYPGHALAGMEFQRQWETRAFELGGGNYDAPGQLVGDFIADRPS 420 Query: 361 TQLGSVIPSYKPGVLLGDLDQSLPDYAIDAIRESLPFFDKQIRGYAMHDAVLTGVETRTS 420 T GSV+PSYKPGV LGDL+ SLP YAI+AIRE+LP F+KQI+G++M DAVLTGVETRTS Sbjct: 421 TAFGSVLPSYKPGVKLGDLNTSLPSYAIEAIREALPAFEKQIKGFSMADAVLTGVETRTS 480 Query: 421 SPVRIRRNDDTLQSLNTKGLYPAGEGAGYAGGIMSASIDGIKVAEAVALAIMGS 474 SP+RI+RND+ LQSLNT+GL+PAGEGAGYAGGIMSA+IDGI+VAEAVAL+++ S Sbjct: 481 SPIRIKRNDNDLQSLNTRGLFPAGEGAGYAGGIMSAAIDGIRVAEAVALSMLDS 534 >emb|CAL60314.2| Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Herminiimonas arsenicoxydans] Length = 541 Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/472 (77%), Positives = 421/472 (89%) Query: 1 VRDEAAVLARHKGKQNIVPTPDTNYHFVARAPAGLSKRPIVIGTGPCGIFAGLILAEMGF 60 VR+E R +G +++ PDT+YHFVA+APA LS RP+VIG GPCGIFA L+LA+MGF Sbjct: 61 VRNEEKTAKRLQGNRHVTIAPDTSYHFVAQAPADLSMRPVVIGFGPCGIFAALVLAQMGF 120 Query: 61 NPLILERGKTVRERTKDTWGLWRQRELKPESNVQYGEGGAGTFSDGKLYSQVKDPKHYGR 120 P+ILERGK VRERTKDT+GLWR+REL PESNVQ+GEGGAGTFSDGKL+SQVKDPKHYGR Sbjct: 121 RPIILERGKEVRERTKDTFGLWRKRELNPESNVQFGEGGAGTFSDGKLWSQVKDPKHYGR 180 Query: 121 KVLTEFVAADAPPEIMYVSKPHIGTFRLVKMVQLMREKIVALGGEFRFEQRVDDLVIEDG 180 KVL EFV ADAP EIMYVSKPHIGTFRLVKMV+LMRE I LGGEFRFE +VDD+ I DG Sbjct: 181 KVLMEFVKADAPEEIMYVSKPHIGTFRLVKMVELMRETIKQLGGEFRFESKVDDIEIADG 240 Query: 181 QVRGVTLAGGEHIEADHVVLAIGHSARDTFQMLYDRGVYMEAKPFSIGFRAEHPQSLIDK 240 +V G+ LA G HI+ +HVVLAIGHSARDTFQML+ RG+Y+E KPFSIGFR EHPQSLID Sbjct: 241 KVCGLKLADGSHIDTNHVVLAIGHSARDTFQMLHARGIYLEPKPFSIGFRIEHPQSLIDA 300 Query: 241 CRFGPSAGHPILGAADYKLVHHASNGRSVYSFCMCPGGTVVAASSEPERVVTNGMSQYSR 300 CR GP+AGHP+LGAADYKLV+HASNGRSVYSFCMCPGGTVVAA+SEP R+VTNGMSQYSR Sbjct: 301 CRLGPNAGHPVLGAADYKLVYHASNGRSVYSFCMCPGGTVVAAASEPGRLVTNGMSQYSR 360 Query: 301 NERNANSGIVVGISPADYPGHPLAGIEFQRKWESRAYELGGRNYDAPGQLVGDFLAKKPS 360 NERNAN+GIVVGI+P DYPG PLAG+EFQR+WE RA+ELGG NYDAPGQLVGDF+A +PS Sbjct: 361 NERNANAGIVVGITPKDYPGDPLAGMEFQRQWEERAFELGGGNYDAPGQLVGDFIANRPS 420 Query: 361 TQLGSVIPSYKPGVLLGDLDQSLPDYAIDAIRESLPFFDKQIRGYAMHDAVLTGVETRTS 420 T GSV+PSYKPGV LGDL+ SLP Y IDAIRE+LP F+KQI+G++M+DAVLTGVETRTS Sbjct: 421 TAFGSVLPSYKPGVKLGDLNPSLPTYVIDAIREALPAFEKQIKGFSMNDAVLTGVETRTS 480 Query: 421 SPVRIRRNDDTLQSLNTKGLYPAGEGAGYAGGIMSASIDGIKVAEAVALAIM 472 SPV I+RNDD LQS+NT+GL+PAGEGAGYAGGIMSA+IDGI+VAEA+AL+++ Sbjct: 481 SPVSIKRNDDDLQSINTRGLFPAGEGAGYAGGIMSAAIDGIRVAEALALSML 532 >ref|YP_001098443.1| putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase [Herminiimonas arsenicoxydans] Length = 481 Score = 755 bits (1949), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/472 (77%), Positives = 421/472 (89%) Query: 1 VRDEAAVLARHKGKQNIVPTPDTNYHFVARAPAGLSKRPIVIGTGPCGIFAGLILAEMGF 60 +R+E R +G +++ PDT+YHFVA+APA LS RP+VIG GPCGIFA L+LA+MGF Sbjct: 1 MRNEEKTAKRLQGNRHVTIAPDTSYHFVAQAPADLSMRPVVIGFGPCGIFAALVLAQMGF 60 Query: 61 NPLILERGKTVRERTKDTWGLWRQRELKPESNVQYGEGGAGTFSDGKLYSQVKDPKHYGR 120 P+ILERGK VRERTKDT+GLWR+REL PESNVQ+GEGGAGTFSDGKL+SQVKDPKHYGR Sbjct: 61 RPIILERGKEVRERTKDTFGLWRKRELNPESNVQFGEGGAGTFSDGKLWSQVKDPKHYGR 120 Query: 121 KVLTEFVAADAPPEIMYVSKPHIGTFRLVKMVQLMREKIVALGGEFRFEQRVDDLVIEDG 180 KVL EFV ADAP EIMYVSKPHIGTFRLVKMV+LMRE I LGGEFRFE +VDD+ I DG Sbjct: 121 KVLMEFVKADAPEEIMYVSKPHIGTFRLVKMVELMRETIKQLGGEFRFESKVDDIEIADG 180 Query: 181 QVRGVTLAGGEHIEADHVVLAIGHSARDTFQMLYDRGVYMEAKPFSIGFRAEHPQSLIDK 240 +V G+ LA G HI+ +HVVLAIGHSARDTFQML+ RG+Y+E KPFSIGFR EHPQSLID Sbjct: 181 KVCGLKLADGSHIDTNHVVLAIGHSARDTFQMLHARGIYLEPKPFSIGFRIEHPQSLIDA 240 Query: 241 CRFGPSAGHPILGAADYKLVHHASNGRSVYSFCMCPGGTVVAASSEPERVVTNGMSQYSR 300 CR GP+AGHP+LGAADYKLV+HASNGRSVYSFCMCPGGTVVAA+SEP R+VTNGMSQYSR Sbjct: 241 CRLGPNAGHPVLGAADYKLVYHASNGRSVYSFCMCPGGTVVAAASEPGRLVTNGMSQYSR 300 Query: 301 NERNANSGIVVGISPADYPGHPLAGIEFQRKWESRAYELGGRNYDAPGQLVGDFLAKKPS 360 NERNAN+GIVVGI+P DYPG PLAG+EFQR+WE RA+ELGG NYDAPGQLVGDF+A +PS Sbjct: 301 NERNANAGIVVGITPKDYPGDPLAGMEFQRQWEERAFELGGGNYDAPGQLVGDFIANRPS 360 Query: 361 TQLGSVIPSYKPGVLLGDLDQSLPDYAIDAIRESLPFFDKQIRGYAMHDAVLTGVETRTS 420 T GSV+PSYKPGV LGDL+ SLP Y IDAIRE+LP F+KQI+G++M+DAVLTGVETRTS Sbjct: 361 TAFGSVLPSYKPGVKLGDLNPSLPTYVIDAIREALPAFEKQIKGFSMNDAVLTGVETRTS 420 Query: 421 SPVRIRRNDDTLQSLNTKGLYPAGEGAGYAGGIMSASIDGIKVAEAVALAIM 472 SPV I+RNDD LQS+NT+GL+PAGEGAGYAGGIMSA+IDGI+VAEA+AL+++ Sbjct: 421 SPVSIKRNDDDLQSINTRGLFPAGEGAGYAGGIMSAAIDGIRVAEALALSML 472