BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0404.p         (183 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_997765.1| ABC transporter-like protein [Verminephrobacter...   237   4e-61
ref|YP_001900352.1| ABC transporter-like protein [Ralstonia pick...   179   2e-43
ref|ZP_06687506.1| glutamine ABC superfamily ATP binding cassett...   178   3e-43
ref|YP_004348347.1| ABC transporter related protein [Burkholderi...   176   2e-42
ref|YP_002982334.1| ABC transporter-like protein [Ralstonia pick...   174   6e-42

>ref|YP_997765.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2]
 gb|ABM58747.1| ABC transporter related [Verminephrobacter eiseniae EF01-2]
          Length = 252

 Score =  237 bits (605), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 116/137 (84%), Positives = 124/137 (90%)

Query: 1   MITVSKLGKSFSGHRILHGIDLEVAASQVVVIIGPSGSGKSTLLRCCNGLEVAEEGSISI 60
           MIT+S+LGKSFSG RIL GIDL+V ASQVVVIIGPSGSGKSTLLRCCNGLEVAEEGSISI
Sbjct: 3   MITISQLGKSFSGQRILRGIDLQVEASQVVVIIGPSGSGKSTLLRCCNGLEVAEEGSISI 62

Query: 61  CNQDLLVDGKMIADHALNDLRTQVGMVFQSFNLFPHLSVLENVTVGPRKIRGTPKDEADT 120
           CNQ LL+DGK+IADHALNDLRTQVGMVFQSFNLFPHLSVLENVTVGPRKIRG  KD+A+T
Sbjct: 63  CNQHLLIDGKIIADHALNDLRTQVGMVFQSFNLFPHLSVLENVTVGPRKIRGMSKDQAET 122

Query: 121 LARALLAKVGRRRRGDG 137
           LA  LLAKVG   + D 
Sbjct: 123 LAHDLLAKVGLAAKADA 139


>ref|YP_001900352.1| ABC transporter-like protein [Ralstonia pickettii 12J]
 gb|ACD27920.1| ABC transporter related [Ralstonia pickettii 12J]
          Length = 266

 Score =  179 bits (454), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 89/137 (64%), Positives = 102/137 (74%)

Query: 1   MITVSKLGKSFSGHRILHGIDLEVAASQVVVIIGPSGSGKSTLLRCCNGLEVAEEGSISI 60
           MI +  L KS+  H +L GID EV ASQVVV+IGPSGSGKST LRCCNGLE+AE G+I I
Sbjct: 19  MIQIRGLTKSYGDHTVLKGIDFEVDASQVVVVIGPSGSGKSTFLRCCNGLEIAEGGTIDI 78

Query: 61  CNQDLLVDGKMIADHALNDLRTQVGMVFQSFNLFPHLSVLENVTVGPRKIRGTPKDEADT 120
           C + L+ DGK++ D  LN LR QVGMVFQSFNLFPHLSVL NVTVGPR + G  K EA+T
Sbjct: 79  CGKRLIDDGKLLPDGELNQLRQQVGMVFQSFNLFPHLSVLHNVTVGPRMLSGKSKHEAET 138

Query: 121 LARALLAKVGRRRRGDG 137
            AR LL KVG   + D 
Sbjct: 139 EARELLQKVGLAHKADA 155


>ref|ZP_06687506.1| glutamine ABC superfamily ATP binding cassette transporter, ABC
           protein [Achromobacter piechaudii ATCC 43553]
 gb|EFF75606.1| glutamine ABC superfamily ATP binding cassette transporter, ABC
           protein [Achromobacter piechaudii ATCC 43553]
          Length = 260

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 86/134 (64%), Positives = 105/134 (78%)

Query: 1   MITVSKLGKSFSGHRILHGIDLEVAASQVVVIIGPSGSGKSTLLRCCNGLEVAEEGSISI 60
           MI +  L KS+  H +L GID +V  SQVVV+IGPSGSGKSTLLRCCNGLEVAE G++ I
Sbjct: 10  MIRIRGLEKSYGDHAVLKGIDFDVLPSQVVVVIGPSGSGKSTLLRCCNGLEVAEAGTVDI 69

Query: 61  CNQDLLVDGKMIADHALNDLRTQVGMVFQSFNLFPHLSVLENVTVGPRKIRGTPKDEADT 120
           C Q LL +G+++ + ALN LR QVGMVFQSFNLFPHLSVL+NVTVGPR +RG  +D+A+ 
Sbjct: 70  CGQTLLDNGELLPEAALNQLRMQVGMVFQSFNLFPHLSVLDNVTVGPRTLRGMGRDQANA 129

Query: 121 LARALLAKVGRRRR 134
           LA  LL KVG  ++
Sbjct: 130 LAEDLLKKVGLSQK 143


>ref|YP_004348347.1| ABC transporter related protein [Burkholderia gladioli BSR3]
 gb|AEA62835.1| ABC transporter related protein [Burkholderia gladioli BSR3]
          Length = 254

 Score =  176 bits (445), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 83/137 (60%), Positives = 104/137 (75%)

Query: 1   MITVSKLGKSFSGHRILHGIDLEVAASQVVVIIGPSGSGKSTLLRCCNGLEVAEEGSISI 60
           ++++ +L KSF  HR+L+GID ++  SQVVV+IGPSGSGKST LRCCNGLE  E G+I I
Sbjct: 7   IVSIRELTKSFGSHRVLNGIDFDIRPSQVVVVIGPSGSGKSTFLRCCNGLEQPERGTIDI 66

Query: 61  CNQDLLVDGKMIADHALNDLRTQVGMVFQSFNLFPHLSVLENVTVGPRKIRGTPKDEADT 120
           C Q L+  G ++ D  LN LRT+VGMVFQSFNLFPHLSVL+N+TVGPR +RG  K +A+T
Sbjct: 67  CGQRLVEHGTLLEDRRLNALRTEVGMVFQSFNLFPHLSVLQNITVGPRMLRGASKADAET 126

Query: 121 LARALLAKVGRRRRGDG 137
            A ALL KVG   + D 
Sbjct: 127 AALALLEKVGLEHKADA 143


>ref|YP_002982334.1| ABC transporter-like protein [Ralstonia pickettii 12D]
 gb|ACS63662.1| ABC transporter related [Ralstonia pickettii 12D]
          Length = 266

 Score =  174 bits (440), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 87/137 (63%), Positives = 100/137 (72%)

Query: 1   MITVSKLGKSFSGHRILHGIDLEVAASQVVVIIGPSGSGKSTLLRCCNGLEVAEEGSISI 60
           MI +  L KS+  H +L GID EV ASQVVV+IGPSGSGKST LRCCNGLE AE G+I I
Sbjct: 19  MIEIRGLTKSYGDHTVLKGIDFEVDASQVVVVIGPSGSGKSTFLRCCNGLETAEGGTIDI 78

Query: 61  CNQDLLVDGKMIADHALNDLRTQVGMVFQSFNLFPHLSVLENVTVGPRKIRGTPKDEADT 120
           C + L+ +G ++ D  LN LR QVGMVFQSFNLFPHLSVL NVTVGPR + G  K EA+T
Sbjct: 79  CGKRLIDNGTVLPDGELNQLRQQVGMVFQSFNLFPHLSVLHNVTVGPRMLSGKSKHEAET 138

Query: 121 LARALLAKVGRRRRGDG 137
            AR LL KVG   + D 
Sbjct: 139 EARELLQKVGLAHKADA 155