BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0403.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_997766.1| polar amino acid ABC transporter inner membrane... 363 7e-99 ref|YP_547890.1| amino acid ABC transporter permease [Polaromona... 353 1e-95 ref|ZP_04761968.1| polar amino acid ABC transporter, inner membr... 352 3e-95 ref|YP_004152520.1| polar amino acid ABC transporter inner membr... 340 9e-92 ref|YP_002942091.1| polar amino acid ABC transporter inner membr... 340 1e-91 >ref|YP_997766.1| polar amino acid ABC transporter inner membrane subunit [Verminephrobacter eiseniae EF01-2] gb|ABM58748.1| polar amino acid ABC transporter, inner membrane subunit [Verminephrobacter eiseniae EF01-2] Length = 221 Score = 363 bits (933), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 211/219 (96%) Query: 1 LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60 LDF+PV EG P+LLHGAIVTV+ITA SLVLGC GLLVG+GRLDRSKRL YGICTAYVTF Sbjct: 3 LDFLPVLEGLPELLHGAIVTVKITATSLVLGCIFGLLVGMGRLDRSKRLRYGICTAYVTF 62 Query: 61 IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120 IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA Sbjct: 63 IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 122 Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180 ARSLGMSSGKAMRTIILPQA+VRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV Sbjct: 123 ARSLGMSSGKAMRTIILPQAVVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 182 Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGGAV 219 SYRSLEVY+AVALVYLVLT+LT MALQ+VE+ LRAGGAV Sbjct: 183 SYRSLEVYLAVALVYLVLTTLTGMALQKVEQRLRAGGAV 221 >ref|YP_547890.1| amino acid ABC transporter permease [Polaromonas sp. JS666] gb|ABE42992.1| amino acid ABC transporter membrane protein, PAAT family [Polaromonas sp. JS666] Length = 222 Score = 353 bits (905), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 170/219 (77%), Positives = 198/219 (90%) Query: 1 LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60 LDF P++ GWP LL GA+VTVEITA SL+LGC +GLLVG+GRL+ +R++YG+CTAYV Sbjct: 3 LDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAI 62 Query: 61 IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120 IRGTPLLVQLF+LFFGLPQF ILLPAF+CGV+GLGIYSGAYVSE+VRGAIQSID+GQMEA Sbjct: 63 IRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQMEA 122 Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180 ARS+GMSSG AMR ++LPQA+VRMIPPLGNEFIALIKNSALVSLLTI D+MHEGQKIISV Sbjct: 123 ARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182 Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGGAV 219 SYRSLEVY+A+A+VY VLT T++ L+R+E LRAGG V Sbjct: 183 SYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLRAGGMV 221 >ref|ZP_04761968.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] gb|EER61252.1| polar amino acid ABC transporter, inner membrane subunit [Acidovorax delafieldii 2AN] Length = 222 Score = 352 bits (902), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 172/219 (78%), Positives = 198/219 (90%) Query: 1 LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60 LDF PV+ G P LL GA+VTVEITA SL+LGC +GLLVG+GRL+ +R++Y +CTAYV Sbjct: 3 LDFSPVWAGLPQLLAGAVVTVEITAASLLLGCVMGLLVGIGRLNPKRRVVYALCTAYVAA 62 Query: 61 IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120 IRGTPLLVQLF+LFFGLPQF ILLPAF+CGV+GLGIYSGAYVSE+VRGAIQSIDKGQMEA Sbjct: 63 IRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDKGQMEA 122 Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180 ARS+GMSSG AMRT++LPQA+VRMIPPLGNEFIALIKNSALVSLLTI DLMHEGQKIISV Sbjct: 123 ARSIGMSSGLAMRTVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDLMHEGQKIISV 182 Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGGAV 219 SYRSLEVY+A+A+VY +LT +TS+ L+R+E LRAGG V Sbjct: 183 SYRSLEVYLAIAVVYFILTGVTSLVLRRMELRLRAGGMV 221 >ref|YP_004152520.1| polar amino acid ABC transporter inner membrane subunit [Variovorax paradoxus EPS] gb|ADU34409.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus EPS] Length = 222 Score = 340 bits (872), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 167/217 (76%), Positives = 189/217 (87%) Query: 1 LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60 LDF PV++GWPDLL GA+VTVEITA +L LGC LGL+VG+GRL+ +R IY +CTAYV Sbjct: 3 LDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLIVGIGRLNPKRRWIYSVCTAYVAV 62 Query: 61 IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120 IRGTPLLVQLF+LFFGLP F ILLPAFLCGVLGLG+YSGAYVSEIVRGAIQSIDKGQ A Sbjct: 63 IRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMA 122 Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180 A+SLGM+ G AMR I+LPQA+VRMIPPLGNEFIALIKNSALVSLLTI D+MHEGQKIISV Sbjct: 123 AQSLGMTPGVAMREIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182 Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGG 217 SYRSLEVY+A+ALVY VLT ++ L+ E+ LR GG Sbjct: 183 SYRSLEVYLAIALVYFVLTGTMTLVLRHFEQKLRQGG 219 >ref|YP_002942091.1| polar amino acid ABC transporter inner membrane protein [Variovorax paradoxus S110] gb|ACS16825.1| polar amino acid ABC transporter, inner membrane subunit [Variovorax paradoxus S110] Length = 222 Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 167/217 (76%), Positives = 188/217 (86%) Query: 1 LDFVPVFEGWPDLLHGAIVTVEITAISLVLGCFLGLLVGLGRLDRSKRLIYGICTAYVTF 60 DF PV++GWPDLL GA+VTVEITA +L LGC LGLLVG+GRL+ +R +YG CTAYV Sbjct: 3 FDFSPVWQGWPDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWLYGACTAYVAA 62 Query: 61 IRGTPLLVQLFLLFFGLPQFDILLPAFLCGVLGLGIYSGAYVSEIVRGAIQSIDKGQMEA 120 IRGTPLLVQLF+LFFGLP F ILLPAFLCGVLGLG+YSGAYVSEIVRGAIQSIDKGQ A Sbjct: 63 IRGTPLLVQLFILFFGLPHFGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMA 122 Query: 121 ARSLGMSSGKAMRTIILPQAIVRMIPPLGNEFIALIKNSALVSLLTIADLMHEGQKIISV 180 A+SLGM+ G AMR I+LPQA+VRMIPPLGNEFIALIKNSALVSLLTI D+MHEGQKIISV Sbjct: 123 AQSLGMTPGTAMREIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182 Query: 181 SYRSLEVYIAVALVYLVLTSLTSMALQRVEKHLRAGG 217 SYRSLEVY+A+ALVY VLT ++ L+ E+ LR GG Sbjct: 183 SYRSLEVYLAIALVYFVLTGTMTLVLRHFEQKLRQGG 219