BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0402.p (515 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_997767.1| extracellular solute-binding protein [Vermineph... 450 e-124 ref|YP_001795408.1| high-affinity glutamine transporter, ABC tra... 353 6e-95 ref|YP_724567.1| ABC transporter periplasmic protein [Ralstonia ... 342 9e-92 ref|YP_295804.1| extracellular solute-binding protein [Ralstonia... 339 7e-91 ref|YP_004683894.1| ABC transporter permease [Cupriavidus necato... 338 2e-90 >ref|YP_997767.1| extracellular solute-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM58749.1| extracellular solute-binding protein, family 3 [Verminephrobacter eiseniae EF01-2] Length = 246 Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust. Identities = 222/247 (89%), Positives = 228/247 (92%), Gaps = 4/247 (1%) Query: 266 RRLIRMLAAVSLAAGFTVAPALACAQTVDVIRVATDATFPPFEFFKDGKRTGFDIELIEL 325 R I +LAA S F + PALA AQTV VIRVATDATFPPFEFFK+GKRTGFDIELIEL Sbjct: 3 RYFISLLAAFS----FGLLPALASAQTVSVIRVATDATFPPFEFFKNGKRTGFDIELIEL 58 Query: 326 LGKTMGKKVEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRVVNFTDPYYPGGLVVLT 385 L K MGKKVEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRVV+FTDPYYPGGLVVLT Sbjct: 59 LAKNMGKKVEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRVVDFTDPYYPGGLVVLT 118 Query: 386 KASNNAIKQPSDLAGKKVSVQVGTKSANYLKEYYPQAERIEVEKNQEMFNLVEIGRADAA 445 KASN AI+QPSDLAGKKVSVQVGTKSANYLK YYPQ ERIEVEKNQEMFNLVEIGRADAA Sbjct: 119 KASNTAIRQPSDLAGKKVSVQVGTKSANYLKAYYPQTERIEVEKNQEMFNLVEIGRADAA 178 Query: 446 VTGKPAAIEYAKTRPGMKVLDKQVSIELYGYAVRKDLPQLTEEMNAALKKVKLDGSYDKL 505 VTGKPAAIEYAKTRPGMKVLDKQVS+ELYGYAVRKDLPQLTEEMNAALKK KLDGSYDKL Sbjct: 179 VTGKPAAIEYAKTRPGMKVLDKQVSVELYGYAVRKDLPQLTEEMNAALKKAKLDGSYDKL 238 Query: 506 VQKWLSS 512 V KWLSS Sbjct: 239 VHKWLSS 245 >ref|YP_001795408.1| high-affinity glutamine transporter, ABC transporter substrate-binding protein peri_bind) [Cupriavidus taiwanensis LMG 19424] emb|CAP62686.1| high-affinity glutamine transport protein, ABC transporter, periplasmic binding component peri_bind) [Cupriavidus taiwanensis LMG 19424] Length = 251 Score = 353 bits (905), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 171/254 (67%), Positives = 207/254 (81%), Gaps = 3/254 (1%) Query: 262 MNHRRRLIRMLAAVSLAAGFTVAPALACAQTVDVIRVATDATFPPFEFFKDGKRTGFDIE 321 MN RR+ ++AA+S AG T A A AQ +V+RVATDATFPP EF ++GKRTGFD+E Sbjct: 1 MNLRRKC--LIAALSAVAGLTFG-ASAHAQDSNVLRVATDATFPPMEFIENGKRTGFDVE 57 Query: 322 LIELLGKTMGKKVEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRVVNFTDPYYPGGL 381 L+E + KTMGK+VEWT+IDFKGLIPGLVSRRFD+A S IYIT ERR+VV+FT+PYY GGL Sbjct: 58 LVEAMAKTMGKQVEWTNIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFTEPYYTGGL 117 Query: 382 VVLTKASNNAIKQPSDLAGKKVSVQVGTKSANYLKEYYPQAERIEVEKNQEMFNLVEIGR 441 V L K+ N AI +P DL GKKVSVQVGTKS ++L++ YPQ R+EVEKNQEMFNLVEIGR Sbjct: 118 VALVKSGNTAINKPEDLNGKKVSVQVGTKSVSFLRDTYPQVTRVEVEKNQEMFNLVEIGR 177 Query: 442 ADAAVTGKPAAIEYAKTRPGMKVLDKQVSIELYGYAVRKDLPQLTEEMNAALKKVKLDGS 501 ADAAVTGKPAA++Y KTR G++V+++Q++ E YG AVRKD P+LT +NAAL KVK DG+ Sbjct: 178 ADAAVTGKPAAMQYVKTRGGLRVVEQQLTTEEYGMAVRKDTPELTRALNAALAKVKADGT 237 Query: 502 YDKLVQKWLSSAAK 515 Y KL QKW SAAK Sbjct: 238 YAKLTQKWFGSAAK 251 >ref|YP_724567.1| ABC transporter periplasmic protein [Ralstonia eutropha H16] emb|CAJ91199.1| ABC-type transporter, periplasmic component: PAAT family [Ralstonia eutropha H16] Length = 251 Score = 342 bits (877), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 163/254 (64%), Positives = 204/254 (80%), Gaps = 3/254 (1%) Query: 262 MNHRRRLIRMLAAVSLAAGFTVAPALACAQTVDVIRVATDATFPPFEFFKDGKRTGFDIE 321 MN RR+ ++A ++ T+ A A AQ V+RVATDATFPP EF ++GKRTGFD+E Sbjct: 1 MNLRRKC--LMAGLATLTALTLGTA-AQAQDNAVLRVATDATFPPMEFIENGKRTGFDVE 57 Query: 322 LIELLGKTMGKKVEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRVVNFTDPYYPGGL 381 L+E + KTMGK+VEWTDIDFKGLIPGLVSRRFD+A S IYIT ERR+VV+FT+PYY GGL Sbjct: 58 LVEAMAKTMGKRVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFTEPYYVGGL 117 Query: 382 VVLTKASNNAIKQPSDLAGKKVSVQVGTKSANYLKEYYPQAERIEVEKNQEMFNLVEIGR 441 V L K+ N + P+DL GKKVSVQVGTKS ++L++ YPQ +R+EVEKNQEMFNLVEIGR Sbjct: 118 VALVKSGNTTVHAPADLNGKKVSVQVGTKSVSFLRDTYPQVQRVEVEKNQEMFNLVEIGR 177 Query: 442 ADAAVTGKPAAIEYAKTRPGMKVLDKQVSIELYGYAVRKDLPQLTEEMNAALKKVKLDGS 501 ADAAVTGKPAA++Y KTR G++++++Q++ E YG AVRKD P+LT +NAAL KVK DG+ Sbjct: 178 ADAAVTGKPAAMQYVKTRGGLRMVEQQLTTEEYGMAVRKDTPELTRALNAALAKVKADGT 237 Query: 502 YDKLVQKWLSSAAK 515 Y +L QKW +AAK Sbjct: 238 YARLTQKWFGTAAK 251 >ref|YP_295804.1| extracellular solute-binding protein [Ralstonia eutropha JMP134] gb|AAZ60960.1| amino acid ABC transporter substrate-binding protein, PAAT family [Ralstonia eutropha JMP134] Length = 252 Score = 339 bits (870), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 163/253 (64%), Positives = 203/253 (80%), Gaps = 3/253 (1%) Query: 262 MNHRRRLIRMLAAVSLAAGFTVAPALACAQTVDVIRVATDATFPPFEFFKDGKRTGFDIE 321 MN RR+ ++A ++ G T A A A+ V+RVATDATFPP EF ++GKRTGFD+E Sbjct: 1 MNLRRKC--LMAGLTALIGLTFGAA-AHAEDNAVLRVATDATFPPMEFIENGKRTGFDVE 57 Query: 322 LIELLGKTMGKKVEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRVVNFTDPYYPGGL 381 L+E + KTMGK+VEWTDIDFKGLIPGLVSRRFD+A S IYIT ERR+VV+FT+PYY GGL Sbjct: 58 LVEAMAKTMGKRVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERRKVVDFTEPYYTGGL 117 Query: 382 VVLTKASNNAIKQPSDLAGKKVSVQVGTKSANYLKEYYPQAERIEVEKNQEMFNLVEIGR 441 V L K+ N I P+DL GKKVSVQVGTKS ++L++ YPQ +R+EVEKNQEMFNLVEIGR Sbjct: 118 VALVKSGNTTIHAPADLNGKKVSVQVGTKSVSFLRDTYPQVQRVEVEKNQEMFNLVEIGR 177 Query: 442 ADAAVTGKPAAIEYAKTRPGMKVLDKQVSIELYGYAVRKDLPQLTEEMNAALKKVKLDGS 501 ADAAVTGKPAA++Y KTR G++++++ ++ E YG AVRKD+P+LT +NAAL KVK DG+ Sbjct: 178 ADAAVTGKPAAMQYVKTRGGLRMVEQPLTTEEYGMAVRKDMPELTRALNAALVKVKADGT 237 Query: 502 YDKLVQKWLSSAA 514 Y KL QKW +AA Sbjct: 238 YAKLTQKWFGTAA 250 >ref|YP_004683894.1| ABC transporter permease [Cupriavidus necator N-1] gb|AEI75413.1| ABC transport system permease protein PAAT family [Cupriavidus necator N-1] Length = 251 Score = 338 bits (866), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 162/254 (63%), Positives = 202/254 (79%), Gaps = 3/254 (1%) Query: 262 MNHRRRLIRMLAAVSLAAGFTVAPALACAQTVDVIRVATDATFPPFEFFKDGKRTGFDIE 321 MN RR+ ++A ++ T+ A A AQ V+RVATDATFPP EF ++GKRTGFD+E Sbjct: 1 MNLRRKC--LMAGLATLTALTLGTA-AHAQDNAVLRVATDATFPPMEFIENGKRTGFDVE 57 Query: 322 LIELLGKTMGKKVEWTDIDFKGLIPGLVSRRFDVASSAIYITEERRRVVNFTDPYYPGGL 381 L+E + KTMGK+VEWTDIDFKGLIPGLVSRRFD+A S IYIT ER +VV+FT+PYY GGL Sbjct: 58 LVEAMAKTMGKRVEWTDIDFKGLIPGLVSRRFDMAVSGIYITPERSKVVDFTEPYYTGGL 117 Query: 382 VVLTKASNNAIKQPSDLAGKKVSVQVGTKSANYLKEYYPQAERIEVEKNQEMFNLVEIGR 441 V L K+ N + P+DL GKKVSVQVGTKS ++L++ YPQ +R+EVEKNQEMFNLVEIGR Sbjct: 118 VALVKSGNTTVHAPADLNGKKVSVQVGTKSVSFLRDTYPQVQRVEVEKNQEMFNLVEIGR 177 Query: 442 ADAAVTGKPAAIEYAKTRPGMKVLDKQVSIELYGYAVRKDLPQLTEEMNAALKKVKLDGS 501 ADAAVTGKPAA++Y KTR G++++++ ++ E YG AVRKD P+LT +NAAL KVK DG+ Sbjct: 178 ADAAVTGKPAAMQYVKTRGGLRMVEQPLTTEEYGMAVRKDTPELTRALNAALAKVKADGT 237 Query: 502 YDKLVQKWLSSAAK 515 Y KL QKW +AAK Sbjct: 238 YAKLTQKWFGTAAK 251