BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0401.p (539 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_03454106.1| methyl-accepting chemotaxis protein [Burkhold... 506 e-141 ref|YP_111933.1| methyl-accepting chemotaxis protein [Burkholder... 504 e-140 ref|YP_336187.1| methyl-accepting chemotaxis protein [Burkholder... 504 e-140 ref|YP_001076650.1| methyl-accepting chemotaxis protein [Burkhol... 504 e-140 ref|ZP_01765513.1| methyl-accepting chemotaxis protein [Burkhold... 504 e-140 >ref|ZP_03454106.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 576] gb|EEC34853.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 576] Length = 617 Score = 506 bits (1304), Expect = e-141, Method: Compositional matrix adjust. Identities = 278/500 (55%), Positives = 358/500 (71%), Gaps = 2/500 (0%) Query: 7 SGGTMKLSQLKISARLAIGFTLVCVLLIVVTLLGIIQMAQQKQRMDEITKINNVEASEAS 66 SG M + +K++ RL IGF LV LL V+ + +MA+ + M EIT++N+VEA A+ Sbjct: 52 SGEMMGFAHMKVATRLGIGFALVACLLAVMIAFALDRMAKFEGWMVEITEVNSVEAKLAA 111 Query: 67 SMYLSITERALALRNMILLGENPPEIDAEMKRVDTQAKKYAAAEKKLEAMLKSESTTNPE 126 + LSITERALALRN+ILL + E+ E R+D +AK Y + +L M + T P+ Sbjct: 112 KLELSITERALALRNLILL-DRQDEMQIEQDRIDAKAKLYRQSRDRLATMFATLDGT-PQ 169 Query: 127 ERQLFAAISETAKLANGYIRQVTELILAGKRDEAYAVLRNEFRPVQRKWWDQLNNFIVLE 186 ER L I + A+G+I + +ILAG++D+AY +LR EFRPVQ KWW LE Sbjct: 170 ERALLEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPVQAKWWALTRELKALE 229 Query: 187 NKQNEDASNNADVAYVNARFMMLLFGGLALVVSIMAAYLITRSVLSQLGGEPSYANQIAT 246 KQNE+A+ +A AY +R ML+ G LALV S+++A+LITR ++ QLGGEP A A Sbjct: 230 EKQNEEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAAN 289 Query: 247 RIAHGDLTVNIETRPSDQDSLLFSIKSMRDALAQIVGQVRAGTDTIATASSQIAKGNLDL 306 IA GDL+V I R D+ SL+ ++KSMRD+LA+IV QV DTIATAS QIA GNLDL Sbjct: 290 MIAAGDLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDL 349 Query: 307 SSRTEQQASSLEETASSMEELASTVKQNSGSAVQAHELAVSASDVASKAGEVVQQVITTM 366 S+RTEQQA+SLEETA+SME+L +TV+QN+ ++ QA LA SAS VA K G V QV+ M Sbjct: 350 SARTEQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVAEKGGAAVTQVVDAM 409 Query: 367 GLINNSSHKIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSA 426 G I+ ++ KIVEII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSA Sbjct: 410 GSIHATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSA 469 Query: 427 TAAKEIKVLITDSVKQVDIGRSLVEQAGTTMGEVVGSVRKVNGMVAEISQSSRQQSEGIE 486 TAA+EIK LI SV QV+ G L ++AG TM EVV S+R+V ++AEI+++S QQ+ GI Sbjct: 470 TAAREIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIV 529 Query: 487 QINDAVAQMDNVTQQNAALV 506 +I+ A+ QMD VTQQNA+LV Sbjct: 530 EIDRAITQMDQVTQQNASLV 549 >ref|YP_111933.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei K96243] emb|CAH39405.1| putative methyl-accepting chemotaxis protein [Burkholderia pseudomallei K96243] Length = 563 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 276/496 (55%), Positives = 356/496 (71%), Gaps = 2/496 (0%) Query: 11 MKLSQLKISARLAIGFTLVCVLLIVVTLLGIIQMAQQKQRMDEITKINNVEASEASSMYL 70 M + +K++ RL IGF LV LL V+ + +MA+ + M EIT++N+VEA A+ + L Sbjct: 2 MGFAHMKVATRLGIGFALVACLLAVMVAFALDRMAKFEGWMVEITEVNSVEAKLAAKLEL 61 Query: 71 SITERALALRNMILLGENPPEIDAEMKRVDTQAKKYAAAEKKLEAMLKSESTTNPEERQL 130 SITERALALRN+ILL + E+ E R+D +AK Y + +L M + T P+ER L Sbjct: 62 SITERALALRNLILL-DRQDEMQIEQDRIDAKAKLYRQSRDRLATMFATLDGT-PQERAL 119 Query: 131 FAAISETAKLANGYIRQVTELILAGKRDEAYAVLRNEFRPVQRKWWDQLNNFIVLENKQN 190 I + A+G+I + +ILAG++D+AY +LR EFRPVQ KWW LE KQN Sbjct: 120 LEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPVQAKWWALTRELKALEEKQN 179 Query: 191 EDASNNADVAYVNARFMMLLFGGLALVVSIMAAYLITRSVLSQLGGEPSYANQIATRIAH 250 E+A+ +A AY +R ML+ G LALV S+++A+LITR ++ QLGGEP A A IA Sbjct: 180 EEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAA 239 Query: 251 GDLTVNIETRPSDQDSLLFSIKSMRDALAQIVGQVRAGTDTIATASSQIAKGNLDLSSRT 310 GDL+V I R D+ SL+ ++KSMRD+LA+IV QV DTIATAS QIA GNLDLS+RT Sbjct: 240 GDLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSART 299 Query: 311 EQQASSLEETASSMEELASTVKQNSGSAVQAHELAVSASDVASKAGEVVQQVITTMGLIN 370 EQQA+SLEETA+SME+L +TV+QN+ ++ QA LA SAS VA K G V QV+ MG I+ Sbjct: 300 EQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVAEKGGTAVTQVVDAMGSIH 359 Query: 371 NSSHKIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSATAAK 430 ++ KIVEII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAA+ Sbjct: 360 ATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAR 419 Query: 431 EIKVLITDSVKQVDIGRSLVEQAGTTMGEVVGSVRKVNGMVAEISQSSRQQSEGIEQIND 490 EIK LI SV QV+ G L ++AG TM EVV S+R+V ++AEI+++S QQ+ GI +I+ Sbjct: 420 EIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDR 479 Query: 491 AVAQMDNVTQQNAALV 506 A+ QMD VTQQNA+LV Sbjct: 480 AITQMDQVTQQNASLV 495 >ref|YP_336187.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1710b] ref|ZP_04956277.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1710a] gb|ABA52543.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1710b] gb|EET05799.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1710a] Length = 562 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 276/496 (55%), Positives = 356/496 (71%), Gaps = 2/496 (0%) Query: 11 MKLSQLKISARLAIGFTLVCVLLIVVTLLGIIQMAQQKQRMDEITKINNVEASEASSMYL 70 M + +K++ RL IGF LV LL V+ + +MA+ + M EIT++N+VEA A+ + L Sbjct: 1 MGFAHMKVATRLGIGFALVACLLAVMIAFALDRMAKFEGWMVEITEVNSVEAKLAAKLEL 60 Query: 71 SITERALALRNMILLGENPPEIDAEMKRVDTQAKKYAAAEKKLEAMLKSESTTNPEERQL 130 SITERALALRN+ILL + E+ E R+D +AK Y + +L M + T P+ER L Sbjct: 61 SITERALALRNLILL-DRQDEMQIEQDRIDAKAKLYRQSRDRLATMFATLDGT-PQERAL 118 Query: 131 FAAISETAKLANGYIRQVTELILAGKRDEAYAVLRNEFRPVQRKWWDQLNNFIVLENKQN 190 I + A+G+I + +ILAG++D+AY +LR EFRPVQ KWW LE KQN Sbjct: 119 LEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPVQAKWWALTRELKALEEKQN 178 Query: 191 EDASNNADVAYVNARFMMLLFGGLALVVSIMAAYLITRSVLSQLGGEPSYANQIATRIAH 250 E+A+ +A AY +R ML+ G LALV S+++A+LITR ++ QLGGEP A A IA Sbjct: 179 EEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAA 238 Query: 251 GDLTVNIETRPSDQDSLLFSIKSMRDALAQIVGQVRAGTDTIATASSQIAKGNLDLSSRT 310 GDL+V I R D+ SL+ ++KSMRD+LA+IV QV DTIATAS QIA GNLDLS+RT Sbjct: 239 GDLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSART 298 Query: 311 EQQASSLEETASSMEELASTVKQNSGSAVQAHELAVSASDVASKAGEVVQQVITTMGLIN 370 EQQA+SLEETA+SME+L +TV+QN+ ++ QA LA SAS VA K G V QV+ MG I+ Sbjct: 299 EQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVAEKGGTAVTQVVDAMGSIH 358 Query: 371 NSSHKIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSATAAK 430 ++ KIVEII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAA+ Sbjct: 359 ATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAR 418 Query: 431 EIKVLITDSVKQVDIGRSLVEQAGTTMGEVVGSVRKVNGMVAEISQSSRQQSEGIEQIND 490 EIK LI SV QV+ G L ++AG TM EVV S+R+V ++AEI+++S QQ+ GI +I+ Sbjct: 419 EIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDR 478 Query: 491 AVAQMDNVTQQNAALV 506 A+ QMD VTQQNA+LV Sbjct: 479 AITQMDQVTQQNASLV 494 >ref|YP_001076650.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106a] ref|ZP_04810094.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106b] gb|ABN95140.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106a] gb|EES20719.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 1106b] Length = 562 Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust. Identities = 276/496 (55%), Positives = 355/496 (71%), Gaps = 2/496 (0%) Query: 11 MKLSQLKISARLAIGFTLVCVLLIVVTLLGIIQMAQQKQRMDEITKINNVEASEASSMYL 70 M + +K++ RL IGF LV LL V+ + +MA+ + M EIT++N+VEA A+ + L Sbjct: 1 MGFAHMKVATRLGIGFALVACLLAVMVAFALDRMAKFEGWMVEITEVNSVEAKLAAKLEL 60 Query: 71 SITERALALRNMILLGENPPEIDAEMKRVDTQAKKYAAAEKKLEAMLKSESTTNPEERQL 130 SITERALALRN+ILL + E+ E R+D +AK Y + +L M + T P+ER L Sbjct: 61 SITERALALRNLILL-DRQDEMQIEQDRIDAKAKLYRQSRDRLATMFATLDGT-PQERAL 118 Query: 131 FAAISETAKLANGYIRQVTELILAGKRDEAYAVLRNEFRPVQRKWWDQLNNFIVLENKQN 190 I + A+G+I + +ILAG++D+AY +LR EFRPVQ KWW LE KQN Sbjct: 119 LEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPVQAKWWALTRELKALEEKQN 178 Query: 191 EDASNNADVAYVNARFMMLLFGGLALVVSIMAAYLITRSVLSQLGGEPSYANQIATRIAH 250 E+A+ +A AY R ML+ G LALV S+++A+LITR ++ QLGGEP A A IA Sbjct: 179 EEATLHAKAAYEEGRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAA 238 Query: 251 GDLTVNIETRPSDQDSLLFSIKSMRDALAQIVGQVRAGTDTIATASSQIAKGNLDLSSRT 310 GDL+V I R D+ SL+ ++KSMRD+LA+IV QV DTIATAS QIA GNLDLS+RT Sbjct: 239 GDLSVAIGVRDGDEASLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSART 298 Query: 311 EQQASSLEETASSMEELASTVKQNSGSAVQAHELAVSASDVASKAGEVVQQVITTMGLIN 370 EQQA+SLEETA+SME+L +TV+QN+ ++ QA LA SAS VA K G V QV+ MG I+ Sbjct: 299 EQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVAEKGGAAVTQVVDAMGSIH 358 Query: 371 NSSHKIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSATAAK 430 ++ KIVEII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAA+ Sbjct: 359 ATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAR 418 Query: 431 EIKVLITDSVKQVDIGRSLVEQAGTTMGEVVGSVRKVNGMVAEISQSSRQQSEGIEQIND 490 EIK LI SV QV+ G L ++AG TM EVV S+R+V ++AEI+++S QQ+ GI +I+ Sbjct: 419 EIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDR 478 Query: 491 AVAQMDNVTQQNAALV 506 A+ QMD VTQQNA+LV Sbjct: 479 AITQMDQVTQQNASLV 494 >ref|ZP_01765513.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 305] gb|EBA50663.1| methyl-accepting chemotaxis protein [Burkholderia pseudomallei 305] Length = 562 Score = 504 bits (1297), Expect = e-140, Method: Compositional matrix adjust. Identities = 276/496 (55%), Positives = 356/496 (71%), Gaps = 2/496 (0%) Query: 11 MKLSQLKISARLAIGFTLVCVLLIVVTLLGIIQMAQQKQRMDEITKINNVEASEASSMYL 70 M + +K++ RL IGF LV LL V+ + +MA+ + M EIT++N+VEA A+ + L Sbjct: 1 MGFAHMKVATRLGIGFALVACLLAVMVAFALDRMAKFEGWMVEITEVNSVEAKLAAKLEL 60 Query: 71 SITERALALRNMILLGENPPEIDAEMKRVDTQAKKYAAAEKKLEAMLKSESTTNPEERQL 130 SITERALALRN+ILL + E+ E R+D +AK Y + +L M + T P+ER L Sbjct: 61 SITERALALRNLILL-DRQDEMQIEQDRIDAKAKLYRQSRDRLATMFATLDGT-PQERAL 118 Query: 131 FAAISETAKLANGYIRQVTELILAGKRDEAYAVLRNEFRPVQRKWWDQLNNFIVLENKQN 190 I + A+G+I + +ILAG++D+AY +LR EFRPVQ KWW LE KQN Sbjct: 119 LEQIGQQGDAADGFIARARTMILAGQKDDAYKLLRFEFRPVQAKWWALTRELKALEEKQN 178 Query: 191 EDASNNADVAYVNARFMMLLFGGLALVVSIMAAYLITRSVLSQLGGEPSYANQIATRIAH 250 E+A+ +A AY +R ML+ G LALV S+++A+LITR ++ QLGGEP A A IA Sbjct: 179 EEATLHAKAAYEESRTWMLVLGALALVSSVVSAWLITRGIVRQLGGEPCDAAHAANMIAA 238 Query: 251 GDLTVNIETRPSDQDSLLFSIKSMRDALAQIVGQVRAGTDTIATASSQIAKGNLDLSSRT 310 GDL+V I R D+ SL+ ++KSMRD+LA+IV QV DTIATAS QIA GNLDLS+RT Sbjct: 239 GDLSVAIGVRDGDEVSLMHAMKSMRDSLAEIVSQVHVSADTIATASGQIASGNLDLSART 298 Query: 311 EQQASSLEETASSMEELASTVKQNSGSAVQAHELAVSASDVASKAGEVVQQVITTMGLIN 370 EQQA+SLEETA+SME+L +TV+QN+ ++ QA LA SAS VA K G V QV+ MG I+ Sbjct: 299 EQQAASLEETAASMEQLTATVQQNTDNSRQADTLAASASHVAEKGGAAVTQVVDAMGSIH 358 Query: 371 NSSHKIVEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSATAAK 430 ++ KIVEII VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSATAA+ Sbjct: 359 ATAQKIVEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSATAAR 418 Query: 431 EIKVLITDSVKQVDIGRSLVEQAGTTMGEVVGSVRKVNGMVAEISQSSRQQSEGIEQIND 490 EIK LI SV QV+ G L ++AG TM EVV S+R+V ++AEI+++S QQ+ GI +I+ Sbjct: 419 EIKELIGGSVVQVEAGDRLAKEAGATMHEVVESIRRVTLIMAEITRASEQQTSGIVEIDR 478 Query: 491 AVAQMDNVTQQNAALV 506 A+ QMD VTQQNA+LV Sbjct: 479 AITQMDQVTQQNASLV 494