BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0396.p (382 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003279121.1| diguanylate cyclase [Comamonas testosteroni ... 507 e-141 ref|YP_969122.1| diguanylate cyclase [Acidovorax citrulli AAC00-... 506 e-141 ref|ZP_03544680.1| diguanylate cyclase [Comamonas testosteroni K... 506 e-141 ref|ZP_07045155.1| diguanylate cyclase [Comamonas testosteroni S... 504 e-141 ref|YP_002873015.1| putative signaling-related membrane protein ... 503 e-140 >ref|YP_003279121.1| diguanylate cyclase [Comamonas testosteroni CNB-2] gb|ACY33825.1| diguanylate cyclase [Comamonas testosteroni CNB-2] Length = 387 Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust. Identities = 270/379 (71%), Positives = 309/379 (81%) Query: 1 MALDPSSILILTTALSAAAALYLAVEWDSVRERSLLFWSAGFAVITVGSVLALLRSSGFL 60 M LDP ++L+L+ A++AA+ALYLA EW SVRERSL WSAGFA+I VGSVLALLRSSG++ Sbjct: 1 MVLDPFTLLVLSAAMAAASALYLAAEWSSVRERSLRLWSAGFAIIAVGSVLALLRSSGYV 60 Query: 61 LIGIWFANGLLIVAHWLFLAGVSRFTSTRLSRGWWLVGAAWLAMLLVPAEPWWSRVMLCI 120 L GIWF NGLLI AHWLFLAGV+ FT TRL R WWL+ WLAML +P PWWS+ ML I Sbjct: 61 LFGIWFPNGLLIAAHWLFLAGVAGFTRTRLPRTWWLLAVVWLAMLFLPDGPWWSKTMLGI 120 Query: 121 QSLLIAGLTLRASLLLRPHGVSLSVGAVQLRYVLLAHGLFYVAKAGSTVALDAFVDLAAF 180 QSL+IA +TLRA LLLRPHG +LSVGA QLR+VLLAHGLFY+AKA STVA DAFV+LA+F Sbjct: 121 QSLMIAVITLRAGLLLRPHGAALSVGAAQLRFVLLAHGLFYLAKAASTVAPDAFVNLASF 180 Query: 181 RGGVIQISLVEGAMAIMLIALSMTGTERHRREERIEQLAARDPLTALYNRRALDMRAPAL 240 RG VI +SLVEG MAIML+A+SMTGTERHRREERI Q+AARDPLTAL NRRAL +RAP L Sbjct: 181 RGAVILVSLVEGVMAIMLLAMSMTGTERHRREERIAQIAARDPLTALDNRRALYLRAPEL 240 Query: 241 LEQATPASPGALLLIDIDNFKQVNDLHGHSAGDRLLVALSEMIRDALPQGSLAARLGGDE 300 L QA+PASPGALLLIDID+FKQVNDLHGH AGDRLLV LS++IR LP G+ AARLGGDE Sbjct: 241 LRQASPASPGALLLIDIDHFKQVNDLHGHDAGDRLLVTLSDLIRGLLPHGAQAARLGGDE 300 Query: 301 FVILLREASGDSVVALGNGLREVFGRMARETFATPSAVTLSVGGTLFDKPPTGLAALLER 360 FVILLR SG LG LRE F + AR FATP V+LS+G TLFD+P T L+ L+R Sbjct: 301 FVILLRSVSGAVAQELGQNLRESFAQQARAMFATPEPVSLSIGATLFDQPETELSHWLKR 360 Query: 361 GDAALYESKRGGRDTVRVA 379 D ALY SKR GRD + +A Sbjct: 361 ADEALYASKRKGRDRMELA 379 >ref|YP_969122.1| diguanylate cyclase [Acidovorax citrulli AAC00-1] gb|ABM31348.1| diguanylate cyclase [Acidovorax citrulli AAC00-1] Length = 432 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 265/380 (69%), Positives = 305/380 (80%), Gaps = 2/380 (0%) Query: 1 MALDPSSILILTTALSAAAALYLAVEWDSVRERSLLFWSAGFAVITVGSVLALLRSSGFL 60 M LDP ++L++T AL+ A+ LYLA EW SVRERSLL WSAGFAVI VGS LALLR+SGFL Sbjct: 43 MVLDPFTLLVITAALATASTLYLASEWSSVRERSLLLWSAGFAVIAVGSALALLRASGFL 102 Query: 61 LIGIWFANGLLIVAHWLFLAGVSRFTSTRLSR-GWWLVGAAWLAMLLVPAEPWWSRVMLC 119 +GIWF+NGLLIVAH LFL GV+ F TRL R G WL+ A WLAML +P PWWS+ ML Sbjct: 103 FVGIWFSNGLLIVAHALFLGGVAAFRRTRLPRAGRWLLAAVWLAMLWLPEGPWWSKTMLG 162 Query: 120 IQSLLIAGLTLRASLLLRPHGV-SLSVGAVQLRYVLLAHGLFYVAKAGSTVALDAFVDLA 178 +QSLLIA +TLRA LLLRP G +LSVGA QLR+VL AHGLFY+AKA S VALDA + LA Sbjct: 163 VQSLLIAAVTLRAGLLLRPQGGGALSVGAAQLRFVLWAHGLFYLAKAASAVALDASIHLA 222 Query: 179 AFRGGVIQISLVEGAMAIMLIALSMTGTERHRREERIEQLAARDPLTALYNRRALDMRAP 238 +FRG VIQ+SLVEG MAIML+A+SMTGTERHRREER+ Q+AARDPLTAL NRRAL +RAP Sbjct: 223 SFRGVVIQVSLVEGVMAIMLLAMSMTGTERHRREERMAQIAARDPLTALDNRRALYLRAP 282 Query: 239 ALLEQATPASPGALLLIDIDNFKQVNDLHGHSAGDRLLVALSEMIRDALPQGSLAARLGG 298 ALL QA+PASPGALLL+DIDNFKQVNDLHGH AGDRLL+ LS++IR LP G+LAARLGG Sbjct: 283 ALLRQASPASPGALLLMDIDNFKQVNDLHGHDAGDRLLITLSDLIRSTLPIGALAARLGG 342 Query: 299 DEFVILLREASGDSVVALGNGLREVFGRMARETFATPSAVTLSVGGTLFDKPPTGLAALL 358 DEFVILLR+AS + ALG LRE F A FATP V+LS+G TLFD+P L+ L Sbjct: 343 DEFVILLRDASPSAAQALGRELREAFSEQASTMFATPEPVSLSIGATLFDQPDAELSHWL 402 Query: 359 ERGDAALYESKRGGRDTVRV 378 +R D ALY SKR GRD + V Sbjct: 403 KRADEALYASKRQGRDRMEV 422 >ref|ZP_03544680.1| diguanylate cyclase [Comamonas testosteroni KF-1] gb|EED68966.1| diguanylate cyclase [Comamonas testosteroni KF-1] Length = 387 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 267/378 (70%), Positives = 309/378 (81%) Query: 1 MALDPSSILILTTALSAAAALYLAVEWDSVRERSLLFWSAGFAVITVGSVLALLRSSGFL 60 MALDP ++L+LT+A++AA+ALYLA EW SVRERSLL WSAGFA+I VG VLALLRS G++ Sbjct: 1 MALDPFTLLVLTSAMAAASALYLAAEWSSVRERSLLLWSAGFAIIAVGCVLALLRSRGYV 60 Query: 61 LIGIWFANGLLIVAHWLFLAGVSRFTSTRLSRGWWLVGAAWLAMLLVPAEPWWSRVMLCI 120 L GIWF NG+LI AHWLFLAGV+ FT RL R WWL+ WLAML +P PWWSR ML I Sbjct: 61 LFGIWFPNGMLIAAHWLFLAGVAGFTRVRLPRAWWLLAVIWLAMLFLPEGPWWSRAMLGI 120 Query: 121 QSLLIAGLTLRASLLLRPHGVSLSVGAVQLRYVLLAHGLFYVAKAGSTVALDAFVDLAAF 180 QSLLIA +TLRA LLLRP G +L+VGA QLR+VLLAHGLFY+AKA S V LD FV+LA F Sbjct: 121 QSLLIAIITLRAGLLLRPQGGALNVGAAQLRFVLLAHGLFYLAKAASPVVLDTFVNLAGF 180 Query: 181 RGGVIQISLVEGAMAIMLIALSMTGTERHRREERIEQLAARDPLTALYNRRALDMRAPAL 240 RG VI +SLVEGAMAIML+A+SM GTERHRREERI Q+AARDPLTAL NRRAL +RAP L Sbjct: 181 RGTVILVSLVEGAMAIMLLAMSMIGTERHRREERIAQIAARDPLTALDNRRALYLRAPQL 240 Query: 241 LEQATPASPGALLLIDIDNFKQVNDLHGHSAGDRLLVALSEMIRDALPQGSLAARLGGDE 300 L+QA+PASPGALLLIDID+FKQVNDLHGH AGDRLLV+L+++IR ALP GSLAARLGGDE Sbjct: 241 LKQASPASPGALLLIDIDHFKQVNDLHGHDAGDRLLVSLADLIRGALPHGSLAARLGGDE 300 Query: 301 FVILLREASGDSVVALGNGLREVFGRMARETFATPSAVTLSVGGTLFDKPPTGLAALLER 360 FVILLR SG + ALG LRE F + AR FATP V+LS+G +LFD+P L+ L+R Sbjct: 301 FVILLRGISGAAAQALGQDLREAFAQQARTMFATPEPVSLSIGASLFDQPGMELSHWLKR 360 Query: 361 GDAALYESKRGGRDTVRV 378 D ALY SKR GRD + + Sbjct: 361 ADDALYASKRKGRDRMEL 378 >ref|ZP_07045155.1| diguanylate cyclase [Comamonas testosteroni S44] gb|EFI61149.1| diguanylate cyclase [Comamonas testosteroni S44] Length = 387 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 272/379 (71%), Positives = 310/379 (81%) Query: 1 MALDPSSILILTTALSAAAALYLAVEWDSVRERSLLFWSAGFAVITVGSVLALLRSSGFL 60 MALDP ++L+L+ A++AA+ALYLA EW SVRERSLL WSAGF +I VGSVLALLRSSG++ Sbjct: 1 MALDPFTLLVLSAAMAAASALYLAAEWSSVRERSLLLWSAGFTIIAVGSVLALLRSSGYV 60 Query: 61 LIGIWFANGLLIVAHWLFLAGVSRFTSTRLSRGWWLVGAAWLAMLLVPAEPWWSRVMLCI 120 L GIWF NGLLIVAHWLFLAGV+ FT TRL R WWL+ WLAML +P PWWS+ ML I Sbjct: 61 LFGIWFPNGLLIVAHWLFLAGVAGFTRTRLPRTWWLLAVVWLAMLFLPDGPWWSKTMLGI 120 Query: 121 QSLLIAGLTLRASLLLRPHGVSLSVGAVQLRYVLLAHGLFYVAKAGSTVALDAFVDLAAF 180 QSLLIA +TLRA LLLRPHG +LSVGA QLR+VLLAHGLFY+AKAGS VA DAFV+LA+F Sbjct: 121 QSLLIAVITLRAGLLLRPHGRALSVGAAQLRFVLLAHGLFYLAKAGSAVAPDAFVNLASF 180 Query: 181 RGGVIQISLVEGAMAIMLIALSMTGTERHRREERIEQLAARDPLTALYNRRALDMRAPAL 240 RG VI +SLVEG MAIML+A+SMTGTERHRREERI Q+AARDPLTAL NRRAL +RAP L Sbjct: 181 RGVVILVSLVEGVMAIMLLAMSMTGTERHRREERIAQIAARDPLTALDNRRALYLRAPEL 240 Query: 241 LEQATPASPGALLLIDIDNFKQVNDLHGHSAGDRLLVALSEMIRDALPQGSLAARLGGDE 300 L QA+PASP ALLLIDID+FKQVNDLHGH AGDRLLV LS++IR LP G+LAARLGGDE Sbjct: 241 LRQASPASPCALLLIDIDHFKQVNDLHGHDAGDRLLVTLSDLIRGLLPHGALAARLGGDE 300 Query: 301 FVILLREASGDSVVALGNGLREVFGRMARETFATPSAVTLSVGGTLFDKPPTGLAALLER 360 FVILLR SG V LG LRE F + AR FATP V+LS+G TLFD+ T L+ L+R Sbjct: 301 FVILLRSVSGAVVQELGQSLRESFAQQARAMFATPEPVSLSIGATLFDQSETELSHWLKR 360 Query: 361 GDAALYESKRGGRDTVRVA 379 D ALY SKR GR + +A Sbjct: 361 ADEALYASKRKGRHRMELA 379 >ref|YP_002873015.1| putative signaling-related membrane protein [Pseudomonas fluorescens SBW25] emb|CAY49672.1| putative signalling-related membrane protein [Pseudomonas fluorescens SBW25] Length = 388 Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust. Identities = 264/378 (69%), Positives = 314/378 (83%) Query: 1 MALDPSSILILTTALSAAAALYLAVEWDSVRERSLLFWSAGFAVITVGSVLALLRSSGFL 60 M LDP +IL LT AL+AAAALYLAVEW SVRE SLL+WSAGFA I++GS LALLR +GF+ Sbjct: 1 MTLDPPTILALTVALAAAAALYLAVEWRSVREPSLLYWSAGFATISIGSTLALLRINGFV 60 Query: 61 LIGIWFANGLLIVAHWLFLAGVSRFTSTRLSRGWWLVGAAWLAMLLVPAEPWWSRVMLCI 120 +IGIWFANGLL+ AH+LFL GV+RFT RLSR W L+ A W ML++PA+ WS+ ML + Sbjct: 61 MIGIWFANGLLVSAHFLFLLGVARFTQVRLSRLWLLMLAVWFGMLMLPADLPWSKAMLGV 120 Query: 121 QSLLIAGLTLRASLLLRPHGVSLSVGAVQLRYVLLAHGLFYVAKAGSTVALDAFVDLAAF 180 QSLL+A TLRAS LLRPHG SLS+GAVQLRYVLL HG FYVAKA S + +DLAAF Sbjct: 121 QSLLVALPTLRASFLLRPHGKSLSIGAVQLRYVLLIHGTFYVAKALSVLIPGTLIDLAAF 180 Query: 181 RGGVIQISLVEGAMAIMLIALSMTGTERHRREERIEQLAARDPLTALYNRRALDMRAPAL 240 +G +IQ+SLVEGAMAIMLIALSMTG+ER+RRE++I +LAARDPLTALYNRRALD+RAP L Sbjct: 181 KGEIIQVSLVEGAMAIMLIALSMTGSERYRREQQIARLAARDPLTALYNRRALDLRAPRL 240 Query: 241 LEQATPASPGALLLIDIDNFKQVNDLHGHSAGDRLLVALSEMIRDALPQGSLAARLGGDE 300 L Q +PA PGALLLIDIDNFK VNDLHGH AGDRLL+ALSEMIR +P+G+LAARLGGDE Sbjct: 241 LAQVSPAQPGALLLIDIDNFKSVNDLHGHIAGDRLLIALSEMIRGVVPRGALAARLGGDE 300 Query: 301 FVILLREASGDSVVALGNGLREVFGRMARETFATPSAVTLSVGGTLFDKPPTGLAALLER 360 FVILL AS + +V LG+ LR+ F ++A +TFATP+ VTLS+G LFD+PP L AL+E+ Sbjct: 301 FVILLNPASTEQIVTLGSSLRDQFHQLAAQTFATPAPVTLSIGANLFDQPPPSLTALIEQ 360 Query: 361 GDAALYESKRGGRDTVRV 378 GD LYESKR GRD++R+ Sbjct: 361 GDTTLYESKRAGRDSIRL 378