BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0383.p (319 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003451109.1| peptide/nickel transport system substrate-bi... 244 2e-62 ref|YP_001417658.1| extracellular solute-binding protein [Xantho... 236 4e-60 ref|YP_001417657.1| extracellular solute-binding protein [Xantho... 226 4e-57 ref|YP_002008042.1| dipeptide ABC transporter, substrate binding... 221 2e-55 gb|EGP46260.1| ABC transporter substrate-binding protein [Achrom... 176 5e-42 >ref|YP_003451109.1| peptide/nickel transport system substrate-binding protein [Azospirillum sp. B510] dbj|BAI74565.1| peptide/nickel transport system substrate-binding protein [Azospirillum sp. B510] Length = 587 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 116/181 (64%), Positives = 136/181 (75%), Gaps = 15/181 (8%) Query: 42 AQTPKSGGTLVAIVQPEPVTLTGAVNTAQPTSLIATNVYDGLLSYDNDLKPHGQXLLSYD 101 AQ + GGTL I+QPEPVTLT + N AQPT ++A N++DGL+SYD DLKP Sbjct: 78 AQDARGGGTLSIILQPEPVTLTPSTNMAQPTQVVAGNIFDGLVSYDFDLKPK-------- 129 Query: 102 NDLKPHGPPLAESWEVSRDGLAITFHLRRGVKWHDGKPFTSADVKWSVENVWKTIHPRNK 161 P LAE WEV+ DGL ITFHLR GVKWHDGKPF++ADVKWS+EN+WKTIHPRNK Sbjct: 130 -------PALAERWEVAPDGLTITFHLRSGVKWHDGKPFSAADVKWSLENIWKTIHPRNK 182 Query: 162 AILVNLTQVDAPDANTAIFRFTKPSLALLSTLNSWGAPVLPKHLYEGTDVLNNPNNNKPV 221 ++ N+TQVD PD T I R +KPSL +LS LN GAP+LPKHLYEGTD+LNNP NNKPV Sbjct: 183 SLFENVTQVDTPDDATVILRLSKPSLPILSVLNGVGAPILPKHLYEGTDILNNPYNNKPV 242 Query: 222 G 222 G Sbjct: 243 G 243 >ref|YP_001417658.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gb|ABS68001.1| extracellular solute-binding protein family 5 [Xanthobacter autotrophicus Py2] Length = 544 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 113/184 (61%), Positives = 135/184 (73%), Gaps = 15/184 (8%) Query: 39 QTAAQTPKSGGTLVAIVQPEPVTLTGAVNTAQPTSLIATNVYDGLLSYDNDLKPHGQXLL 98 Q AA P GGTL I+QPEPVTLT N AQPT ++A NV+DGL++Y DLKP Sbjct: 28 QAAADGPVRGGTLSIILQPEPVTLTPVANVAQPTQVVAGNVFDGLVTYGFDLKP------ 81 Query: 99 SYDNDLKPHGPPLAESWEVSRDGLAITFHLRRGVKWHDGKPFTSADVKWSVENVWKTIHP 158 P LAESWEV+ DGL ITFHLR+GV WHDGKPFT+ DVKWS+ENVWKTIHP Sbjct: 82 ---------APQLAESWEVAPDGLTITFHLRKGVTWHDGKPFTANDVKWSLENVWKTIHP 132 Query: 159 RNKAILVNLTQVDAPDANTAIFRFTKPSLALLSTLNSWGAPVLPKHLYEGTDVLNNPNNN 218 RNKA+ N++ V+ PD +T + +F+KPSL + S LN GAP+LPKHLY+GTD+LNNP NN Sbjct: 133 RNKALFENVSAVEIPDDHTVVLKFSKPSLPIFSVLNGVGAPILPKHLYDGTDILNNPYNN 192 Query: 219 KPVG 222 KPVG Sbjct: 193 KPVG 196 >ref|YP_001417657.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gb|ABS68000.1| extracellular solute-binding protein family 5 [Xanthobacter autotrophicus Py2] Length = 544 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 107/180 (59%), Positives = 131/180 (72%), Gaps = 15/180 (8%) Query: 43 QTPKSGGTLVAIVQPEPVTLTGAVNTAQPTSLIATNVYDGLLSYDNDLKPHGQXLLSYDN 102 TPK GGTL AI+QPEPV LT A+NTA PT ++ +++DGL+ YD++L+P Sbjct: 31 DTPKRGGTLSAIIQPEPVILTAALNTAAPTGIVTGSIFDGLVDYDSNLRPVAA------- 83 Query: 103 DLKPHGPPLAESWEVSRDGLAITFHLRRGVKWHDGKPFTSADVKWSVENVWKTIHPRNKA 162 LAESWE ++DGL T HLR GVKWHDGKPFTSADVKW++E VWK IHPRN+A Sbjct: 84 --------LAESWETAKDGLTFTLHLRGGVKWHDGKPFTSADVKWTLEEVWKKIHPRNQA 135 Query: 163 ILVNLTQVDAPDANTAIFRFTKPSLALLSTLNSWGAPVLPKHLYEGTDVLNNPNNNKPVG 222 I +T VD PD T + ++PS+A+LS+LNS GA VLPKHLYEGTD+LNNP NNKPVG Sbjct: 136 IFAKVTSVDTPDDRTVVLHLSQPSVAILSSLNSNGAQVLPKHLYEGTDILNNPYNNKPVG 195 >ref|YP_002008042.1| dipeptide ABC transporter, substrate binding protein precursor [Cupriavidus taiwanensis LMG 19424] emb|CAQ71986.1| dipeptide ABC transporter, substrate binding protein precursor [Cupriavidus taiwanensis LMG 19424] Length = 583 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 105/175 (60%), Positives = 130/175 (74%), Gaps = 15/175 (8%) Query: 48 GGTLVAIVQPEPVTLTGAVNTAQPTSLIATNVYDGLLSYDNDLKPHGQXLLSYDNDLKPH 107 GGTL I+QPEPV LT A+N+A PT + NV+DGL+ YDND K LKP Sbjct: 65 GGTLTTIIQPEPVILTSALNSAAPTGFFSANVFDGLIEYDNDFK------------LKPA 112 Query: 108 GPPLAESWEVSRDGLAITFHLRRGVKWHDGKPFTSADVKWSVENVWKTIHPRNKAILVNL 167 LA+ W++S+D +TFHLR VKWHDGKPFTSADVKW++ENVWK +HPRN+ + + Sbjct: 113 ---LAQRWDISKDSKTLTFHLRPNVKWHDGKPFTSADVKWTLENVWKKLHPRNQILFGKV 169 Query: 168 TQVDAPDANTAIFRFTKPSLALLSTLNSWGAPVLPKHLYEGTDVLNNPNNNKPVG 222 T+VD PDA T + +F++PSLA+LS+LNS GA VLPKHLYEGTD+LNNP NNKPVG Sbjct: 170 TRVDTPDALTVVLQFSEPSLAVLSSLNSNGAQVLPKHLYEGTDILNNPYNNKPVG 224 >gb|EGP46260.1| ABC transporter substrate-binding protein [Achromobacter xylosoxidans AXX-A] Length = 562 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 90/204 (44%), Positives = 124/204 (60%), Gaps = 20/204 (9%) Query: 22 SMIPGLLLAALPLLAAGQT---AAQTPKSGGTLVAIVQPEPVTLTGAVNTAQPTSLIATN 78 ++ P ++ A P A Q+ Q GG L A+V PEP TL +N++ PT +A+ Sbjct: 36 ALFPNVIFA--PAYADTQSLPNTVQGAAKGGVLNAVVHPEPPTLAFYLNSSTPTGAVASK 93 Query: 79 VYDGLLSYDNDLKPHGQXLLSYDNDLKPHGPPLAESWEVSRDGLAITFHLRRGVKWHDGK 138 ++DGL+ Y DLKP P LAESW V+ DG ITF LR+GV+WHDGK Sbjct: 94 IFDGLVEYGPDLKPR---------------PQLAESWSVADDGKTITFKLRQGVQWHDGK 138 Query: 139 PFTSADVKWSVENVWKTIHPRNKAILVNLTQVDAPDANTAIFRFTKPSLALLSTLNSWGA 198 PFT+ADVKWS E VW P + + L +V+ PD +T + ++P+ L+ ++S GA Sbjct: 139 PFTAADVKWSAEEVWLKHAPSARRVFQYLQRVETPDDHTVVLHLSQPTPVALNAIDSLGA 198 Query: 199 PVLPKHLYEGTDVLNNPNNNKPVG 222 P+LP+HL+EGTD+ NNP NNKPVG Sbjct: 199 PILPRHLFEGTDIQNNPYNNKPVG 222