BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0382.p (191 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001417657.1| extracellular solute-binding protein [Xantho... 228 3e-58 ref|YP_002008042.1| dipeptide ABC transporter, substrate binding... 226 1e-57 ref|YP_003451109.1| peptide/nickel transport system substrate-bi... 221 4e-56 ref|YP_001417658.1| extracellular solute-binding protein [Xantho... 218 3e-55 ref|YP_001238079.1| putative ABC transporter periplasmic binding... 172 2e-41 >ref|YP_001417657.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gb|ABS68000.1| extracellular solute-binding protein family 5 [Xanthobacter autotrophicus Py2] Length = 544 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 108/180 (60%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 10 RGADGVRFTISNDYLPYGDDYRRTAEYLKQSLKRVGIDVNIRSQDTAAFTKRVYGDRDFD 69 RG DG RFT+ DY+PYGDD++RTAEYLKQ+LKRVG++ N+RSQDTAAFT+RVYGDRDFD Sbjct: 363 RGPDGTRFTLDIDYIPYGDDFKRTAEYLKQALKRVGVEANVRSQDTAAFTRRVYGDRDFD 422 Query: 70 TAITWNASFPDPQIGLTRMYWSGWVGKNIPWTNSSGYNNPEVDRVIEQAQGAATQAERIA 129 +ITW A+F DPQ+G+ R YWSG VGKNIPWTN SGY N +VD +I QG A +RI Sbjct: 423 ISITWFAAFSDPQVGVNRAYWSGSVGKNIPWTNGSGYRNDKVDALISATQGEADPEKRIQ 482 Query: 130 LFKKFQQITQTELPTLPLIELHFFTVHSPRLKGITQDGDQSQGSLKNAWLEPVNANLAKA 189 LFK Q+ T+LPTLPL+EL FFTV + L+ GDQ GS ++ W++ +A +A A Sbjct: 483 LFKDLQKTVLTDLPTLPLVELKFFTVEAANLRHPKVRGDQVYGSFRDFWID--DAKVADA 540 >ref|YP_002008042.1| dipeptide ABC transporter, substrate binding protein precursor [Cupriavidus taiwanensis LMG 19424] emb|CAQ71986.1| dipeptide ABC transporter, substrate binding protein precursor [Cupriavidus taiwanensis LMG 19424] Length = 583 Score = 226 bits (576), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 105/174 (60%), Positives = 131/174 (75%) Query: 6 AIIARGADGVRFTISNDYLPYGDDYRRTAEYLKQSLKRVGIDVNIRSQDTAAFTKRVYGD 65 A + RGADG R I DYLPYGDDY+R+AEY+KQ+LKRVG+DV +R+QDT +TKRVYGD Sbjct: 388 AGLKRGADGNRLRIQIDYLPYGDDYKRSAEYIKQALKRVGVDVTVRTQDTPTYTKRVYGD 447 Query: 66 RDFDTAITWNASFPDPQIGLTRMYWSGWVGKNIPWTNSSGYNNPEVDRVIEQAQGAATQA 125 RDFD A+ W A F DP +G+TR Y S VGKNIPW+N SGY E +R+I+QAQG+ +QA Sbjct: 448 RDFDLAVVWFAGFADPLVGVTRAYRSDTVGKNIPWSNGSGYRGDEANRLIDQAQGSPSQA 507 Query: 126 ERIALFKKFQQITQTELPTLPLIELHFFTVHSPRLKGITQDGDQSQGSLKNAWL 179 ER+ LF+KFQ + QT+LP++PL+EL FFTV S L+ DQ SLK AWL Sbjct: 508 ERVELFRKFQSVVQTDLPSIPLLELRFFTVQSSNLRDTVSGVDQVYASLKRAWL 561 >ref|YP_003451109.1| peptide/nickel transport system substrate-binding protein [Azospirillum sp. B510] dbj|BAI74565.1| peptide/nickel transport system substrate-binding protein [Azospirillum sp. B510] Length = 587 Score = 221 bits (564), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 101/168 (60%), Positives = 131/168 (77%) Query: 10 RGADGVRFTISNDYLPYGDDYRRTAEYLKQSLKRVGIDVNIRSQDTAAFTKRVYGDRDFD 69 R A+GVRFT+++D+LPYGDDYRRT E+LKQ+LKRVGI+V IRSQD+AAF KRVY DRDFD Sbjct: 411 RDANGVRFTLTHDFLPYGDDYRRTGEFLKQALKRVGIEVTIRSQDSAAFIKRVYVDRDFD 470 Query: 70 TAITWNASFPDPQIGLTRMYWSGWVGKNIPWTNSSGYNNPEVDRVIEQAQGAATQAERIA 129 AI++N +FPDPQIG+ R +WSGW+G PWTN SGY N D +I++A A+R+A Sbjct: 471 FAISYNNAFPDPQIGVVRAFWSGWLGTGTPWTNGSGYRNARADALIQEAGVEGDPAKRVA 530 Query: 130 LFKKFQQITQTELPTLPLIELHFFTVHSPRLKGITQDGDQSQGSLKNA 177 F +FQ I ++P+LPL+EL+FF+V+S L+GI + GDQ SLKNA Sbjct: 531 EFNEFQDIVLGDVPSLPLLELNFFSVYSANLQGIVEQGDQVYSSLKNA 578 >ref|YP_001417658.1| extracellular solute-binding protein [Xanthobacter autotrophicus Py2] gb|ABS68001.1| extracellular solute-binding protein family 5 [Xanthobacter autotrophicus Py2] Length = 544 Score = 218 bits (556), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 107/180 (59%), Positives = 134/180 (74%) Query: 10 RGADGVRFTISNDYLPYGDDYRRTAEYLKQSLKRVGIDVNIRSQDTAAFTKRVYGDRDFD 69 RG DGVRF +++D+LPYGDDYRRT E+LKQ+LKRVGI+V IR+QD+ AF KRVY DRDFD Sbjct: 364 RGPDGVRFALTHDFLPYGDDYRRTGEFLKQALKRVGIEVAIRAQDSGAFIKRVYADRDFD 423 Query: 70 TAITWNASFPDPQIGLTRMYWSGWVGKNIPWTNSSGYNNPEVDRVIEQAQGAATQAERIA 129 + ++NA+FPDPQIG+ R YWSGW+G PWTN SGY N +VD +IE+A R A Sbjct: 424 ISSSYNAAFPDPQIGVVREYWSGWLGTKTPWTNGSGYRNAQVDALIEKAAVEGDPQARAA 483 Query: 130 LFKKFQQITQTELPTLPLIELHFFTVHSPRLKGITQDGDQSQGSLKNAWLEPVNANLAKA 189 F+ FQQI Q ++PTLPL+EL FFTVH+ LKG + GDQ SL+NAW + NA+ K Sbjct: 484 AFRAFQQIVQRDVPTLPLLELKFFTVHAANLKGAVEQGDQVYSSLRNAWFDGPNADAPKG 543 >ref|YP_001238079.1| putative ABC transporter periplasmic binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ34173.1| putative ABC transporter, periplasmic binding protein [Bradyrhizobium sp. BTAi1] Length = 524 Score = 172 bits (437), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 83/176 (47%), Positives = 118/176 (67%) Query: 10 RGADGVRFTISNDYLPYGDDYRRTAEYLKQSLKRVGIDVNIRSQDTAAFTKRVYGDRDFD 69 R ADGVRF++ D +P+ DD RR AE+++QSLKRVGIDV +R+QD F +R+Y +RDFD Sbjct: 343 RKADGVRFSLHIDGIPFTDDTRRVAEFIRQSLKRVGIDVEVRNQDLPRFFQRIYTERDFD 402 Query: 70 TAITWNASFPDPQIGLTRMYWSGWVGKNIPWTNSSGYNNPEVDRVIEQAQGAATQAERIA 129 A+ ++ DPQIGL R + S + K +P++N+SGY NPE+DR+ E A A+RI Sbjct: 403 LALVPMSATVDPQIGLERYFASSGILKGVPFSNASGYQNPELDRIFEAAHVELDPAKRIE 462 Query: 130 LFKKFQQITQTELPTLPLIELHFFTVHSPRLKGITQDGDQSQGSLKNAWLEPVNAN 185 L+++FQ+I QT+LP LPL+E F TV+S + G+ D + S WL +AN Sbjct: 463 LYRQFQRIIQTDLPALPLLEAAFSTVYSDTVHGLAVAPDSAVESFAGIWLSSPDAN 518