BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0377.p (181 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002008039.1| hypothetical protein RALTA_B1386 [Cupriavidu... 228 2e-58 ref|YP_785271.1| hypothetical protein BAV0738 [Bordetella avium ... 158 3e-37 ref|ZP_00959254.1| probable macrophage infectivity potentiator p... 149 1e-34 ref|ZP_05066764.1| carboxymuconolactone decarboxylase family pro... 148 3e-34 ref|ZP_05123966.1| carboxymuconolactone decarboxylase family pro... 123 1e-26 >ref|YP_002008039.1| hypothetical protein RALTA_B1386 [Cupriavidus taiwanensis LMG 19424] emb|CAQ71983.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424] Length = 182 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 112/179 (62%), Positives = 139/179 (77%), Gaps = 1/179 (0%) Query: 1 MARVSTLLSNQLPEGAARTIFEKVENEYGAFGNMLGVLAHRPASIEHIYGLLLQFAAEGN 60 MAR+ + + L +G ART FE+VE EYGAFGNML VL HRP ++ H++GLLL A + Sbjct: 1 MARIHDIDPDAL-QGEARTTFERVEREYGAFGNMLRVLGHRPPAVAHLFGLLLDSARDAL 59 Query: 61 ISKLHLEIVLVTASKANECSYCVSHHAPKLVAQHVSAETVERILDADVPGLGPVELLVRD 120 I++ HLEIVLVTAS+ N C YC+SHH P+L A V+ ETVERIL+ DVPGL VE LVRD Sbjct: 60 ITRRHLEIVLVTASRLNACHYCISHHVPRLEALGVTPETVERILEPDVPGLDAVERLVRD 119 Query: 121 YALAVTRQRVGDSLVRRLREHFSESQIVELTLRTALCAFFARFNEALDVQLEPEYATAD 179 Y + VT QRV D++V RLREHF+E+Q+VELTLR ALCAFFARFNEAL++Q+EPE A+ Sbjct: 120 YTVQVTTQRVTDTVVARLREHFTEAQVVELTLRAALCAFFARFNEALEIQVEPELLAAE 178 >ref|YP_785271.1| hypothetical protein BAV0738 [Bordetella avium 197N] emb|CAJ48351.1| conserved hypothetical protein [Bordetella avium 197N] Length = 183 Score = 158 bits (400), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 74/155 (47%), Positives = 108/155 (69%), Gaps = 2/155 (1%) Query: 20 IFEKVENEYGAFGNMLGVLAHRPASIEHIYGLLLQFAAEGNISKLHLEIVLVTASKANEC 79 +++++ +YG +GNML RP +++H++ L++ EG IS HLEI L+ ASKA+ C Sbjct: 19 LYQQLLRDYGPYGNMLSAFLPRPPALKHLFSYLVESKKEGLISPRHLEIALLAASKAHAC 78 Query: 80 SYCVSHHAPKLVAQHVSAETVERILDADVPGLGPVELLVRDYALAVTRQ--RVGDSLVRR 137 YCV+ H PKL +Q +S + ++R+L+ +VPGL +L VRDYA+AVT R+GD L R Sbjct: 79 HYCVTLHEPKLASQGISQQAIDRLLEPEVPGLDDQDLAVRDYAVAVTLDAARIGDGLFAR 138 Query: 138 LREHFSESQIVELTLRTALCAFFARFNEALDVQLE 172 LR ++ E +VELT+R ALC+FF RFNEAL+V E Sbjct: 139 LRRYYDEPAVVELTIRIALCSFFKRFNEALEVPSE 173 >ref|ZP_00959254.1| probable macrophage infectivity potentiator protein Mip [Roseovarius nubinhibens ISM] gb|EAP77716.1| probable macrophage infectivity potentiator protein Mip [Roseovarius nubinhibens ISM] Length = 181 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 3/174 (1%) Query: 1 MARVSTLLSNQLPEGAARTIFEKVENEYGAFGNMLGVLAHRPASIEHIYGLLLQFAAEGN 60 MARV + +++P + I+E+ EYG F N + V AHRP ++HI GLLL+ E Sbjct: 1 MARVRDVEIDEVP-AEVQPIYERYAKEYGPFLNQVKVFAHRPPVLKHIMGLLLELHDEAL 59 Query: 61 ISKLHLEIVLVTASKANECSYCVSHHAPKLVAQHVSAETVERILDADVPGLGPVELLVRD 120 + K +LEI LVT S N+C YC++HHAP+ A +S ++ ILD G +++LVRD Sbjct: 60 LPKRYLEIALVTVSTINKCDYCIAHHAPRAQAYGLSPAALDNILDEKPEGFDDLDILVRD 119 Query: 121 YALAVTR--QRVGDSLVRRLREHFSESQIVELTLRTALCAFFARFNEALDVQLE 172 +A VT Q + D++ L+ HFSE QIVELT+R ALC FF R N++L ++ E Sbjct: 120 FAEQVTTKFQYMRDAIFDELKTHFSEEQIVELTMRIALCGFFNRVNDSLQIETE 173 >ref|ZP_05066764.1| carboxymuconolactone decarboxylase family protein [Octadecabacter antarcticus 238] gb|EDY92003.1| carboxymuconolactone decarboxylase family protein [Octadecabacter antarcticus 238] Length = 178 Score = 148 bits (374), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 77/171 (45%), Positives = 107/171 (62%), Gaps = 3/171 (1%) Query: 4 VSTLLSNQLPEGAARTIFEKVENEYGAFGNMLGVLAHRPASIEHIYGLLLQFAAEGNISK 63 +S + +++P+ R I+E+ +YG F N + V AHRP +++HI GLLL+ E + K Sbjct: 1 MSDVDISKVPDDV-RPIYERYARDYGPFLNQVKVFAHRPPALKHIMGLLLELYDEAILPK 59 Query: 64 LHLEIVLVTASKANECSYCVSHHAPKLVAQHVSAETVERILDADVPGLGPVELLVRDYAL 123 +LEI LVT S N C YC++HHAP+ V + V IL G V+LLVRDYA+ Sbjct: 60 RYLEIALVTVSTINRCEYCIAHHAPRAVQHGLPEAAVLDILGKVPEGFDEVDLLVRDYAV 119 Query: 124 AVTR--QRVGDSLVRRLREHFSESQIVELTLRTALCAFFARFNEALDVQLE 172 VT R+ D + L++HF+E QIVELTLR ALC FF RFN+AL ++ E Sbjct: 120 QVTNDFNRMRDGVFVELKKHFTEEQIVELTLRIALCGFFNRFNDALQIETE 170 >ref|ZP_05123966.1| carboxymuconolactone decarboxylase family protein [Rhodobacteraceae bacterium KLH11] gb|EEE38598.1| carboxymuconolactone decarboxylase family protein [Rhodobacteraceae bacterium KLH11] Length = 181 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 75/177 (42%), Positives = 102/177 (57%), Gaps = 5/177 (2%) Query: 1 MARVSTLLSNQLPEGAARTIFEKVENEYGAFGNMLGVLAHRPASIEHIYGLLLQFAAEGN 60 M+R++ L ++ E AR + YG F N V AH P +EH+ G+L A+ Sbjct: 1 MSRIAPLSDQEMTE-EARAAHAALGG-YGPFDNWARVAAHCPPVLEHVTGMLNTLRAQDT 58 Query: 61 ISKLHLEIVLVTASKANECSYCVSHHAPKLVAQHVSAETVERILDA-DVPGLGPVELLVR 119 + + LE+ +VT SK N C YCVSHH+P L +SAE V R+ + D L + V Sbjct: 59 LPRRALELAMVTVSKLNACDYCVSHHSPWLTVTGLSAEGVARLPEVEDHAELDACDKAVV 118 Query: 120 DYALAVTRQ--RVGDSLVRRLREHFSESQIVELTLRTALCAFFARFNEALDVQLEPE 174 YA AVT + R+ D+ V LRE FS++QIVELT R ALC F RFN+AL +Q+E E Sbjct: 119 RYAEAVTTRSGRMRDAEVSDLREWFSDAQIVELTWRIALCGAFNRFNDALQIQIEAE 175