BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0355.p         (199 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_06686512.1| OPT family oligopeptide transporter [Achromob...   254   7e-66
gb|EFV82436.1| OPT family Oligopeptide transporter [Achromobacte...   252   2e-65
ref|YP_003773513.1| transmembrane protein [Herbaspirillum serope...   251   4e-65
ref|YP_004752939.1| hypothetical protein CFU_2289 [Collimonas fu...   250   8e-65
gb|EGP45065.1| oligopeptide transporter [Achromobacter xylosoxid...   250   9e-65

>ref|ZP_06686512.1| OPT family oligopeptide transporter [Achromobacter piechaudii ATCC
           43553]
 gb|EFF76570.1| OPT family oligopeptide transporter [Achromobacter piechaudii ATCC
           43553]
          Length = 707

 Score =  254 bits (648), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 129/181 (71%), Positives = 149/181 (82%), Gaps = 5/181 (2%)

Query: 9   AQYNMAELTLRGVILGALITIVFTASNVYLGLKVGLTFSSAIPAAVISMAVLRLFGSASI 68
           A   + ELT RG++LGALIT++FTASNV+LGLKVGLTFSSAIPAAVISM+VLRLF  A+I
Sbjct: 9   ANVTLPELTFRGILLGALITVIFTASNVFLGLKVGLTFSSAIPAAVISMSVLRLFKDANI 68

Query: 69  LENNMVQTQASAAGTLSAVIFILPGLVMIGHWQGFPYWQTFGICAAGGMLGVLFTIPLRR 128
           LENNMVQTQASAAGTLS++IFILP LVM+GHWQGFP+WQT GICAAGGMLGV+FTIPLR 
Sbjct: 69  LENNMVQTQASAAGTLSSIIFILPALVMMGHWQGFPFWQTLGICAAGGMLGVMFTIPLRH 128

Query: 129 VMVVQSELPYPEGLAAAEILRVGNADTA-----SPXPNVPTAVTTCARGSTTSGPAASCR 183
           VMVVQS+LPYPEG+AAAEILRVG+A+ A     S   +    VT  A GST +   A+  
Sbjct: 129 VMVVQSDLPYPEGVAAAEILRVGSAERAQDAAESAGGDAAGPVTGSAAGSTNASATAASE 188

Query: 184 R 184
           R
Sbjct: 189 R 189


>gb|EFV82436.1| OPT family Oligopeptide transporter [Achromobacter xylosoxidans
           C54]
          Length = 188

 Score =  252 bits (643), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 122/149 (81%), Positives = 138/149 (92%)

Query: 9   AQYNMAELTLRGVILGALITIVFTASNVYLGLKVGLTFSSAIPAAVISMAVLRLFGSASI 68
           A+  + ELT RGV+LGA+ITI+FTASNV+LGLKVGLTFSSAIPAAVISM+VLRLF  A+I
Sbjct: 9   AEVTLPELTFRGVLLGAVITIIFTASNVFLGLKVGLTFSSAIPAAVISMSVLRLFKDANI 68

Query: 69  LENNMVQTQASAAGTLSAVIFILPGLVMIGHWQGFPYWQTFGICAAGGMLGVLFTIPLRR 128
           LENNMVQTQASAAGTLSA+IFILP LVM+GHWQGFP+WQT GICAAGGMLGV+FTIPLR 
Sbjct: 69  LENNMVQTQASAAGTLSAIIFILPALVMMGHWQGFPFWQTLGICAAGGMLGVMFTIPLRH 128

Query: 129 VMVVQSELPYPEGLAAAEILRVGNADTAS 157
           VMVVQS+LPYPEG+AAAEILRVG+A+ A 
Sbjct: 129 VMVVQSDLPYPEGVAAAEILRVGSAERAQ 157


>ref|YP_003773513.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ61605.1| transmembrane protein [Herbaspirillum seropedicae SmR1]
          Length = 668

 Score =  251 bits (641), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 124/145 (85%), Positives = 138/145 (95%)

Query: 10  QYNMAELTLRGVILGALITIVFTASNVYLGLKVGLTFSSAIPAAVISMAVLRLFGSASIL 69
           Q  + ELTLRG++LGALIT+VFTASNVYLGLKVGLTFSSAIPAAVISMAVLRLF +A+IL
Sbjct: 6   QAGLPELTLRGMLLGALITVVFTASNVYLGLKVGLTFSSAIPAAVISMAVLRLFANANIL 65

Query: 70  ENNMVQTQASAAGTLSAVIFILPGLVMIGHWQGFPYWQTFGICAAGGMLGVLFTIPLRRV 129
           ENNMVQTQASAAGTLS+VIFILPGL+M+GHWQGFP+ QT GICAAGGMLGV+F+IPLRRV
Sbjct: 66  ENNMVQTQASAAGTLSSVIFILPGLLMMGHWQGFPFLQTLGICAAGGMLGVMFSIPLRRV 125

Query: 130 MVVQSELPYPEGLAAAEILRVGNAD 154
           MVVQ ELPYPEG+AAAEILRVG+AD
Sbjct: 126 MVVQGELPYPEGVAAAEILRVGSAD 150


>ref|YP_004752939.1| hypothetical protein CFU_2289 [Collimonas fungivorans Ter331]
 gb|AEK62116.1| putative membrane protein [Collimonas fungivorans Ter331]
          Length = 697

 Score =  250 bits (639), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 123/143 (86%), Positives = 137/143 (95%)

Query: 12  NMAELTLRGVILGALITIVFTASNVYLGLKVGLTFSSAIPAAVISMAVLRLFGSASILEN 71
           ++ ELTLRG+ILGALIT+VFTASNVYLGLKVGLTFSSAIPAAVISMAVLR+F SA+ILEN
Sbjct: 27  SLPELTLRGIILGALITVVFTASNVYLGLKVGLTFSSAIPAAVISMAVLRMFKSANILEN 86

Query: 72  NMVQTQASAAGTLSAVIFILPGLVMIGHWQGFPYWQTFGICAAGGMLGVLFTIPLRRVMV 131
           NMVQTQASAAGTLS++IFILPGLVMIG+WQGFPYWQT  ICAAGGMLGV+FTIPLR  MV
Sbjct: 87  NMVQTQASAAGTLSSIIFILPGLVMIGYWQGFPYWQTLAICAAGGMLGVMFTIPLRHAMV 146

Query: 132 VQSELPYPEGLAAAEILRVGNAD 154
           VQS+LPYPEG+AAAEILRVG+A+
Sbjct: 147 VQSDLPYPEGVAAAEILRVGSAE 169


>gb|EGP45065.1| oligopeptide transporter [Achromobacter xylosoxidans AXX-A]
          Length = 683

 Score =  250 bits (638), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 126/173 (72%), Positives = 142/173 (82%), Gaps = 4/173 (2%)

Query: 9   AQYNMAELTLRGVILGALITIVFTASNVYLGLKVGLTFSSAIPAAVISMAVLRLFGSASI 68
           A+  + ELT RGV+LGA+ITI+FTASNV+LGLKVGLTFSSAIPAAVISM+VLRLF  A+I
Sbjct: 9   AEVTLPELTFRGVLLGAVITIIFTASNVFLGLKVGLTFSSAIPAAVISMSVLRLFKDANI 68

Query: 69  LENNMVQTQASAAGTLSAVIFILPGLVMIGHWQGFPYWQTFGICAAGGMLGVLFTIPLRR 128
           LENNMVQTQASAAGTLS++IFILP LVM+GHWQGFP+WQT GICAAGGMLGV+FTIPLR 
Sbjct: 69  LENNMVQTQASAAGTLSSIIFILPALVMMGHWQGFPFWQTLGICAAGGMLGVMFTIPLRH 128

Query: 129 VMVVQSELPYPEGLAAAEILRVGNA----DTASPXPNVPTAVTTCARGSTTSG 177
           VMVVQS+LPYPEG+AAAEILRVG+A    D A      P        G   SG
Sbjct: 129 VMVVQSDLPYPEGVAAAEILRVGSAERAQDAAEESGRAPAKPAATGMGDIVSG 181