BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0344.p         (135 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773526.1| PTS system mannose/fructose-specific transpo...   240   6e-62
ref|YP_004754801.1| putative phosphotransferase, mannose/fructos...   217   4e-55
ref|YP_001098511.1| putative phosphotransferase, mannose/fructos...   210   5e-53
ref|YP_001351863.1| IIA component of sugar transport PTS system ...   208   3e-52
ref|ZP_08275246.1| PTS system fructose subfamily IIA component [...   199   1e-49

>ref|YP_003773526.1| PTS system mannose/fructose-specific transporter subunit IIA
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ61618.1| phosphotransferase (PTS) system, mannose/fructose-specific
           component IIA protein [Herbaspirillum seropedicae SmR1]
          Length = 158

 Score =  240 bits (612), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 116/135 (85%), Positives = 129/135 (95%)

Query: 1   MVGILLLTHAPLGQAFIAAATHVFRGLPERIEAIDVIADQNPAEVQRMAADAVHRLDDGS 60
           MVGILLLTHAPLGQAF+AAATHVFRG PE+IEAIDVIADQNPAEVQ++A +AV RLDDGS
Sbjct: 23  MVGILLLTHAPLGQAFLAAATHVFRGKPEQIEAIDVIADQNPAEVQKLAIEAVGRLDDGS 82

Query: 61  GVLVITDVMGGTPSNCTGYLCAIDNVEIIAGISLPMLLRALTYRNDTLDVVMEMALAGGQ 120
           GVLVITDVMGGTPSNCTG+LC + NV++IAGISLPMLLRALTYRNDTLDVV+EMALAGGQ
Sbjct: 83  GVLVITDVMGGTPSNCTGFLCGLGNVQVIAGISLPMLLRALTYRNDTLDVVVEMALAGGQ 142

Query: 121 SGAVRIDNRIRVSSQ 135
           +GAVRIDNRIRV++ 
Sbjct: 143 NGAVRIDNRIRVAAS 157


>ref|YP_004754801.1| putative phosphotransferase, mannose/fructose-specific component
           IIA family protein [Collimonas fungivorans Ter331]
 gb|AEK63978.1| putative Phosphotransferase, mannose/fructose-specific component
           IIA family protein [Collimonas fungivorans Ter331]
          Length = 134

 Score =  217 bits (553), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 104/133 (78%), Positives = 118/133 (88%)

Query: 1   MVGILLLTHAPLGQAFIAAATHVFRGLPERIEAIDVIADQNPAEVQRMAADAVHRLDDGS 60
           M+GILLLTHAPLGQAFIAAA+HVFR +PER+EAIDV+ADQNP EVQ++A  A  RLDDGS
Sbjct: 1   MIGILLLTHAPLGQAFIAAASHVFRQMPERLEAIDVVADQNPVEVQKLAKQAAARLDDGS 60

Query: 61  GVLVITDVMGGTPSNCTGYLCAIDNVEIIAGISLPMLLRALTYRNDTLDVVMEMALAGGQ 120
           GVLVITDVMGGTPSNCT   C  +  ++IAGISLPMLLRALTYRNDTLDVV EMALAGGQ
Sbjct: 61  GVLVITDVMGGTPSNCTLPFCTGNQTQVIAGISLPMLLRALTYRNDTLDVVTEMALAGGQ 120

Query: 121 SGAVRIDNRIRVS 133
            GAVR+D+R+RV+
Sbjct: 121 GGAVRVDSRVRVA 133


>ref|YP_001098511.1| putative phosphotransferase, mannose/fructose-specific component
           IIA family protein [Herminiimonas arsenicoxydans]
 emb|CAL60382.1| putative Phosphotransferase, mannose/fructose-specific component
           IIA family protein [Herminiimonas arsenicoxydans]
          Length = 135

 Score =  210 bits (535), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 103/133 (77%), Positives = 118/133 (88%)

Query: 1   MVGILLLTHAPLGQAFIAAATHVFRGLPERIEAIDVIADQNPAEVQRMAADAVHRLDDGS 60
           MVGILL+THAPLGQAFIAAATHVFR  PER+EAIDV ADQ+  EV+R+A  A+  LDDGS
Sbjct: 1   MVGILLMTHAPLGQAFIAAATHVFRARPERLEAIDVTADQDTHEVERLAKQAIAGLDDGS 60

Query: 61  GVLVITDVMGGTPSNCTGYLCAIDNVEIIAGISLPMLLRALTYRNDTLDVVMEMALAGGQ 120
           GVLVITDVMGGTPSNCT  LC ++NV +IAGISLPMLLRA+TYR DTLDVV+EMALAGGQ
Sbjct: 61  GVLVITDVMGGTPSNCTLGLCNVENVAVIAGISLPMLLRAITYRRDTLDVVVEMALAGGQ 120

Query: 121 SGAVRIDNRIRVS 133
            GAVR+DNR+R++
Sbjct: 121 GGAVRVDNRVRLA 133


>ref|YP_001351863.1| IIA component of sugar transport PTS system [Janthinobacterium sp.
           Marseille]
 gb|ABR90445.1| Iia component of sugar transport PTS system [Janthinobacterium sp.
           Marseille]
          Length = 135

 Score =  208 bits (529), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 102/133 (76%), Positives = 117/133 (87%)

Query: 1   MVGILLLTHAPLGQAFIAAATHVFRGLPERIEAIDVIADQNPAEVQRMAADAVHRLDDGS 60
           MVGILLLTHAPLGQAFI+AATHVFR  PE ++A+DV ADQ+  EV+R+A  A+  LDDGS
Sbjct: 1   MVGILLLTHAPLGQAFISAATHVFRTRPEHLDAVDVNADQDTGEVERLAKKAIAGLDDGS 60

Query: 61  GVLVITDVMGGTPSNCTGYLCAIDNVEIIAGISLPMLLRALTYRNDTLDVVMEMALAGGQ 120
           GVLVITDVMGGTPSNCT  LC +DNV +IAGISLPMLLRA+TYR DTLDVV+EMALAGGQ
Sbjct: 61  GVLVITDVMGGTPSNCTLGLCNVDNVAVIAGISLPMLLRAITYRQDTLDVVVEMALAGGQ 120

Query: 121 SGAVRIDNRIRVS 133
            GAVR+DNR+R+S
Sbjct: 121 GGAVRVDNRVRLS 133


>ref|ZP_08275246.1| PTS system fructose subfamily IIA component [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF31282.1| PTS system fructose subfamily IIA component [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 135

 Score =  199 bits (506), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 100/133 (75%), Positives = 114/133 (85%)

Query: 1   MVGILLLTHAPLGQAFIAAATHVFRGLPERIEAIDVIADQNPAEVQRMAADAVHRLDDGS 60
           MVGILLLTHAPLGQAFI AA+HVFR  PE++EA+DV ADQ+P EV+R+A   + RLD G 
Sbjct: 1   MVGILLLTHAPLGQAFIDAASHVFRARPEQLEAVDVCADQDPCEVKRLAKVVIERLDAGD 60

Query: 61  GVLVITDVMGGTPSNCTGYLCAIDNVEIIAGISLPMLLRALTYRNDTLDVVMEMALAGGQ 120
           GVLVITDVMGGTPSNCT  L     VE+IAGISLPMLLRALTYR+DTLDVV+EMALAGGQ
Sbjct: 61  GVLVITDVMGGTPSNCTLPLHDPGRVEVIAGISLPMLLRALTYRHDTLDVVVEMALAGGQ 120

Query: 121 SGAVRIDNRIRVS 133
           SG VR+DNR+R+S
Sbjct: 121 SGVVRVDNRVRLS 133