BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0336.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773533.1| preprotein translocase SecE subunit transmem...   207   4e-52
ref|ZP_08274681.1| Preprotein translocase subunit SecE [Oxalobac...   205   2e-51
ref|YP_001355116.1| preprotein translocase SecE subunit [Janthin...   186   1e-45
ref|YP_001101409.1| preprotein translocase membrane subunit [Her...   180   8e-44
ref|YP_004751048.1| preprotein translocase subunit SecE [Collimo...   179   1e-43

>ref|YP_003773533.1| preprotein translocase SecE subunit transmembrane protein
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ61625.1| preprotein translocase SecE subunit transmembrane protein
           [Herbaspirillum seropedicae SmR1]
          Length = 126

 Score =  207 bits (527), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/126 (91%), Positives = 123/126 (97%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           MS+QPVQTVNTS+DK+K+ALAIVAV+AGVVGFFVLS QSTPVRA+ALVAGLLVAV FAWT
Sbjct: 1   MSSQPVQTVNTSNDKIKIALAIVAVVAGVVGFFVLSDQSTPVRAVALVAGLLVAVAFAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+QGRGFVGFAKESVRETKKVVWPTRKEA QITA+VFAFVLIMAIFLWGTDKLLEFLLYD
Sbjct: 61  SAQGRGFVGFAKESVRETKKVVWPTRKEAMQITAVVFAFVLIMAIFLWGTDKLLEFLLYD 120

Query: 121 VILGWK 126
           VILGWK
Sbjct: 121 VILGWK 126


>ref|ZP_08274681.1| Preprotein translocase subunit SecE [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31852.1| Preprotein translocase subunit SecE [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 127

 Score =  205 bits (521), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 100/126 (79%), Positives = 115/126 (91%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           MSNQPVQTV+TSSDKLKVALA+ AVIAGVV F+VL+ +S+ VRA ALV GL+VAVGFAWT
Sbjct: 1   MSNQPVQTVSTSSDKLKVALAVCAVIAGVVAFYVLADKSSIVRASALVFGLIVAVGFAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+QG+ F+ FA E+VRETKKVVWPTRKEA QITAIVF FVL+MA+FLWGTDKLLEF+LYD
Sbjct: 61  STQGKEFLNFASEAVRETKKVVWPTRKEAMQITAIVFCFVLVMALFLWGTDKLLEFILYD 120

Query: 121 VILGWK 126
           +ILGWK
Sbjct: 121 LILGWK 126


>ref|YP_001355116.1| preprotein translocase SecE subunit [Janthinobacterium sp.
           Marseille]
 gb|ABR88845.1| preprotein translocase SecE subunit [Janthinobacterium sp.
           Marseille]
          Length = 127

 Score =  186 bits (471), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 89/126 (70%), Positives = 108/126 (85%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           M+NQPV+TV  S DK+K+ LAI+A IAGVVGF+ LS ++T VRA ALV GL+VA+  AWT
Sbjct: 1   MANQPVETVGASGDKIKIVLAILAAIAGVVGFYFLSDKATAVRAAALVGGLVVAIAIAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+ GR F+ F+KE+VRETKKVVWPTRKEA Q+TAIVF FVL+MA+FLWGTDKLLE +LYD
Sbjct: 61  SAAGRDFLNFSKEAVRETKKVVWPTRKEALQMTAIVFGFVLVMALFLWGTDKLLEVVLYD 120

Query: 121 VILGWK 126
           +ILGWK
Sbjct: 121 LILGWK 126


>ref|YP_001101409.1| preprotein translocase membrane subunit [Herminiimonas
           arsenicoxydans]
 emb|CAL63288.1| Preprotein translocase subunit SecE [Herminiimonas arsenicoxydans]
          Length = 127

 Score =  180 bits (456), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 87/126 (69%), Positives = 104/126 (82%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           MSN PVQTV  S DK+K+ LA++  IAGVVGF+ LS ++T VR  ALV GLL+A+  AWT
Sbjct: 1   MSNHPVQTVGASGDKVKIVLAVLVAIAGVVGFYFLSDKATIVRIAALVGGLLIAIAIAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+ GR FV FAKE+VRETKKVVWPTRKE  Q+TAIVF FVL+MA+FL+GTDKLLE +LYD
Sbjct: 61  SASGRDFVNFAKEAVRETKKVVWPTRKETLQMTAIVFGFVLVMALFLFGTDKLLEVVLYD 120

Query: 121 VILGWK 126
           +ILGWK
Sbjct: 121 LILGWK 126


>ref|YP_004751048.1| preprotein translocase subunit SecE [Collimonas fungivorans Ter331]
 gb|AEK60225.1| Preprotein translocase subunit SecE [Collimonas fungivorans Ter331]
          Length = 127

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/126 (80%), Positives = 111/126 (88%)

Query: 1   MSNQPVQTVNTSSDKLKVALAIVAVIAGVVGFFVLSGQSTPVRALALVAGLLVAVGFAWT 60
           MSN PVQTV  S  KLKV LA++AV+AGVVGF+ LSGQS  VRA ALVAGL+VA+ FAWT
Sbjct: 1   MSNHPVQTVGESGSKLKVILAVLAVVAGVVGFYFLSGQSGLVRAGALVAGLVVAIAFAWT 60

Query: 61  SSQGRGFVGFAKESVRETKKVVWPTRKEATQITAIVFAFVLIMAIFLWGTDKLLEFLLYD 120
           S+QGR F+GFAKE+VRETKKVVWPTRKEA QITAIVFAFVL+MAIFLWG DKLLE LLYD
Sbjct: 61  STQGREFLGFAKEAVRETKKVVWPTRKEAMQITAIVFAFVLVMAIFLWGIDKLLEVLLYD 120

Query: 121 VILGWK 126
           VILGWK
Sbjct: 121 VILGWK 126