BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0334.p         (143 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773535.1| 50s ribosomal protein L11 [Herbaspirillum se...   281   3e-74
gb|EGW62338.1| ribosomal protein L11 [Dechlorosoma suillum PS]        270   7e-71
ref|ZP_08274679.1| LSU ribosomal protein L11p (L12e) [Oxalobacte...   269   1e-70
ref|YP_001900872.1| 50S ribosomal protein L11 [Ralstonia pickett...   266   5e-70
emb|CBJ36565.1| 50S ribosomal subunit protein L11, N-terminal be...   266   6e-70

>ref|YP_003773535.1| 50s ribosomal protein L11 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61627.1| 50s ribosomal subunit L11 protein [Herbaspirillum seropedicae SmR1]
          Length = 143

 Score =  281 bits (718), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 141/143 (98%), Positives = 143/143 (100%)

Query: 1   MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGLEPGLPIPVVIT 60
           MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQG+EPGLPIPVVIT
Sbjct: 1   MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGVEPGLPIPVVIT 60

Query: 61  AFADKSFTFVMKTPPATILIKKAAGIQKGSAKPHTDKVGKITRKQAEEIATQKKPDLTAA 120
           AFADKSFTFVMKTPPATILIKKAAGIQKGS+KPHTDKVGKITRKQAEEIATQKKPDLTAA
Sbjct: 61  AFADKSFTFVMKTPPATILIKKAAGIQKGSSKPHTDKVGKITRKQAEEIATQKKPDLTAA 120

Query: 121 DLEAAVRTIAGSARSMGITVEGL 143
           DLEAAVRTIAGSARSMGITVEGL
Sbjct: 121 DLEAAVRTIAGSARSMGITVEGL 143


>gb|EGW62338.1| ribosomal protein L11 [Dechlorosoma suillum PS]
          Length = 143

 Score =  270 bits (689), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 136/143 (95%), Positives = 138/143 (96%)

Query: 1   MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGLEPGLPIPVVIT 60
           MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQG+EPGLPIPVVIT
Sbjct: 1   MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGVEPGLPIPVVIT 60

Query: 61  AFADKSFTFVMKTPPATILIKKAAGIQKGSAKPHTDKVGKITRKQAEEIATQKKPDLTAA 120
           AFADKSFTFVMKTPPATILIKKAAGIQKGSAKPHTDKVGKITR Q E+IA  K PDLTAA
Sbjct: 61  AFADKSFTFVMKTPPATILIKKAAGIQKGSAKPHTDKVGKITRAQCEDIAKAKSPDLTAA 120

Query: 121 DLEAAVRTIAGSARSMGITVEGL 143
           DLEAAVRTIAGSARSMGITVEGL
Sbjct: 121 DLEAAVRTIAGSARSMGITVEGL 143


>ref|ZP_08274679.1| LSU ribosomal protein L11p (L12e) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31850.1| LSU ribosomal protein L11p (L12e) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 143

 Score =  269 bits (687), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 134/143 (93%), Positives = 139/143 (97%)

Query: 1   MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGLEPGLPIPVVIT 60
           MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQG+EPGLPIPVVIT
Sbjct: 1   MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGVEPGLPIPVVIT 60

Query: 61  AFADKSFTFVMKTPPATILIKKAAGIQKGSAKPHTDKVGKITRKQAEEIATQKKPDLTAA 120
           AFADKSFTFVMKTPPATILIKKAAGI KGS KPHTDKVG ITRKQAEEIATQK+PDLTAA
Sbjct: 61  AFADKSFTFVMKTPPATILIKKAAGITKGSPKPHTDKVGSITRKQAEEIATQKRPDLTAA 120

Query: 121 DLEAAVRTIAGSARSMGITVEGL 143
           D++AAVR IAGSARSMGITVEG+
Sbjct: 121 DMDAAVRIIAGSARSMGITVEGM 143


>ref|YP_001900872.1| 50S ribosomal protein L11 [Ralstonia pickettii 12J]
 ref|YP_002982913.1| 50S ribosomal protein L11 [Ralstonia pickettii 12D]
 ref|ZP_07677533.1| ribosomal protein L11 [Ralstonia sp. 5_7_47FAA]
 sp|B2UF71.1|RL11_RALPJ RecName: Full=50S ribosomal protein L11
 gb|ACD28440.1| ribosomal protein L11 [Ralstonia pickettii 12J]
 gb|ACS64241.1| ribosomal protein L11 [Ralstonia pickettii 12D]
 gb|EFP63914.1| ribosomal protein L11 [Ralstonia sp. 5_7_47FAA]
          Length = 143

 Score =  266 bits (681), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 131/143 (91%), Positives = 138/143 (96%)

Query: 1   MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGLEPGLPIPVVIT 60
           MAKKIIGFIKLQ+PAGKANPSPP+GPALGQRGLNIMEFCKAFNAQTQG+EPGLP+PVVIT
Sbjct: 1   MAKKIIGFIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNAQTQGMEPGLPVPVVIT 60

Query: 61  AFADKSFTFVMKTPPATILIKKAAGIQKGSAKPHTDKVGKITRKQAEEIATQKKPDLTAA 120
           AFADKSFTFVMK+PPAT+LIKKAAGIQKGSAKPHTDKVGKITR QAEEIA  K  DLTAA
Sbjct: 61  AFADKSFTFVMKSPPATVLIKKAAGIQKGSAKPHTDKVGKITRAQAEEIAKAKNADLTAA 120

Query: 121 DLEAAVRTIAGSARSMGITVEGL 143
           DL+AAVRTIAGSARSMGITVEGL
Sbjct: 121 DLDAAVRTIAGSARSMGITVEGL 143


>emb|CBJ36565.1| 50S ribosomal subunit protein L11, N-terminal believed to regulate
           RelA [Ralstonia solanacearum CMR15]
          Length = 161

 Score =  266 bits (681), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 130/143 (90%), Positives = 138/143 (96%)

Query: 1   MAKKIIGFIKLQVPAGKANPSPPIGPALGQRGLNIMEFCKAFNAQTQGLEPGLPIPVVIT 60
           MAKKIIGFIKLQ+PAGKANPSPP+GPALGQRGLNIMEFCKAFNAQTQG+EPGLP+PVVIT
Sbjct: 19  MAKKIIGFIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNAQTQGMEPGLPVPVVIT 78

Query: 61  AFADKSFTFVMKTPPATILIKKAAGIQKGSAKPHTDKVGKITRKQAEEIATQKKPDLTAA 120
           AFADKSFTFVMK+PPAT+LIKKAAG+QKGSAKPHTDKVGKITR QAEEIA  K  DLTAA
Sbjct: 79  AFADKSFTFVMKSPPATVLIKKAAGVQKGSAKPHTDKVGKITRAQAEEIAKAKNADLTAA 138

Query: 121 DLEAAVRTIAGSARSMGITVEGL 143
           DL+AAVRTIAGSARSMGITVEGL
Sbjct: 139 DLDAAVRTIAGSARSMGITVEGL 161