BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0325.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004751057.1| 30S ribosomal protein S12p (S23e) [Collimona...   254   2e-66
ref|YP_001101401.1| 30S ribosomal protein S12 [Herminiimonas ars...   249   1e-64
ref|ZP_08273218.1| SSU ribosomal protein S12p (S23e) [Oxalobacte...   248   3e-64
ref|ZP_04577841.1| small subunit ribosomal protein S12 [Oxalobac...   243   6e-63
ref|ZP_04579991.1| small subunit ribosomal protein S12 [Oxalobac...   241   4e-62

>ref|YP_004751057.1| 30S ribosomal protein S12p (S23e) [Collimonas fungivorans Ter331]
 gb|AEK60234.1| SSU ribosomal protein S12p (S23e) [Collimonas fungivorans Ter331]
          Length = 127

 Score =  254 bits (650), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 125/127 (98%), Positives = 126/127 (99%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRVSA+VKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVSAVVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120

Query: 121 RAKAAKK 127
           RAKAAKK
Sbjct: 121 RAKAAKK 127


>ref|YP_001101401.1| 30S ribosomal protein S12 [Herminiimonas arsenicoxydans]
 ref|YP_001355106.1| 30S ribosomal protein S12 [Janthinobacterium sp. Marseille]
 sp|A4G9U3.1|RS12_HERAR RecName: Full=30S ribosomal protein S12
 sp|A6T3K9.1|RS12_JANMA RecName: Full=30S ribosomal protein S12
 emb|CAL63280.1| 30S ribosomal subunit protein S12 [Herminiimonas arsenicoxydans]
 gb|ABR89014.1| small subunit ribosomal protein S12 [Janthinobacterium sp.
           Marseille]
          Length = 127

 Score =  249 bits (635), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 123/127 (96%), Positives = 123/127 (96%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRVSA VKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVSARVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYG K
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGTK 120

Query: 121 RAKAAKK 127
           RAKA KK
Sbjct: 121 RAKAGKK 127


>ref|ZP_08273218.1| SSU ribosomal protein S12p (S23e) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33312.1| SSU ribosomal protein S12p (S23e) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 127

 Score =  248 bits (632), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 122/127 (96%), Positives = 123/127 (96%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRVSA VKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVSARVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQ+RSKYG K
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQSRSKYGTK 120

Query: 121 RAKAAKK 127
           RAKA KK
Sbjct: 121 RAKAGKK 127


>ref|ZP_04577841.1| small subunit ribosomal protein S12 [Oxalobacter formigenes HOxBLS]
 gb|EEO28803.1| small subunit ribosomal protein S12 [Oxalobacter formigenes HOxBLS]
          Length = 127

 Score =  243 bits (621), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 119/127 (93%), Positives = 121/127 (95%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRV+   KSKSPALEN PQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVTVKTKSKSPALENCPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRG+LDTQGVKDRKQARSKYGAK
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAK 120

Query: 121 RAKAAKK 127
           RAKAA K
Sbjct: 121 RAKAASK 127


>ref|ZP_04579991.1| small subunit ribosomal protein S12 [Oxalobacter formigenes OXCC13]
 gb|EEO30964.1| small subunit ribosomal protein S12 [Oxalobacter formigenes OXCC13]
          Length = 127

 Score =  241 bits (614), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 118/127 (92%), Positives = 120/127 (94%)

Query: 1   MPTINQLIRNPRVSAIVKSKSPALENSPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60
           MPTINQLIR PRVS   KSKSPAL+N PQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG
Sbjct: 1   MPTINQLIRQPRVSVKAKSKSPALDNCPQKRGVCTRVYTTTPKKPNSALRKVAKVRLTNG 60

Query: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGALDTQGVKDRKQARSKYGAK 120
           FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRG+LDTQGVKDRKQARSKYGAK
Sbjct: 61  FEVISYIGGEGHNLQEHSVVLLRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAK 120

Query: 121 RAKAAKK 127
           RAK A K
Sbjct: 121 RAKPASK 127