BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0321.p (398 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751047.1| translation elongation factor Tu [Collimonas... 803 0.0 ref|YP_003773532.1| EF-Tu elongation factor protein [Herbaspiril... 778 0.0 ref|YP_001355117.1| elongation factor Tu [Janthinobacterium sp. ... 777 0.0 ref|YP_004358930.1| Translation elongation factor Tu [Burkholder... 752 0.0 ref|YP_001101398.1| elongation factor Tu [Herminiimonas arsenico... 751 0.0 >ref|YP_004751047.1| translation elongation factor Tu [Collimonas fungivorans Ter331] gb|AEK60224.1| Translation elongation factor Tu [Collimonas fungivorans Ter331] Length = 398 Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/398 (98%), Positives = 396/398 (99%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG Sbjct: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKY+FPGDDLPIIKGSAKLALE Sbjct: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYDFPGDDLPIIKGSAKLALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGR+ERGIVK Sbjct: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRIERGIVK 240 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VGEALQI+GIRDTQDT CTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKP S Sbjct: 241 VGEALQIIGIRDTQDTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPNS 300 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS Sbjct: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKILPDA 398 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKILPDA Sbjct: 361 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKILPDA 398 >ref|YP_003773532.1| EF-Tu elongation factor protein [Herbaspirillum seropedicae SmR1] ref|YP_003773546.1| GTPase translation elongation factor TU [Herbaspirillum seropedicae SmR1] emb|CAM32590.1| GTPase translation elongation factor TU (E [Herbaspirillum seropedicae] gb|ADJ61624.1| EF-Tu elongation factor protein [Herbaspirillum seropedicae SmR1] gb|ADJ61638.1| GTPase translation elongation factor TU (EF-Tu) protein [Herbaspirillum seropedicae SmR1] Length = 396 Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/395 (95%), Positives = 387/395 (97%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG Sbjct: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LLSRQVGVPYIIVFLNKADMVDD ELLELVEMEVRELL+KYEFPGDDLPI+KGSAKLALE Sbjct: 121 LLSRQVGVPYIIVFLNKADMVDDAELLELVEMEVRELLSKYEFPGDDLPIVKGSAKLALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GDTGPLGEQAIMALAEALDTYIPTPERAVDG FL+PVEDVFSISGRGTVVTGRVERGI+K Sbjct: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRVERGIIK 240 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VGE ++IVGI DTQ T CTGVEMFRKLLDQGQAGDNVGVLLRGTKREDV+RGQVLAKPGS Sbjct: 241 VGEEIEIVGIADTQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVQRGQVLAKPGS 300 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTG+IELPKDKEMVMPGDNVS Sbjct: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVS 360 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKIL 395 ITV LINPIAMEEGLRFAIREGGRTVGAGVVAKI Sbjct: 361 ITVQLINPIAMEEGLRFAIREGGRTVGAGVVAKIF 395 >ref|YP_001355117.1| elongation factor Tu [Janthinobacterium sp. Marseille] ref|YP_001355103.1| elongation factor Tu [Janthinobacterium sp. Marseille] sp|A6T3K6.1|EFTU_JANMA RecName: Full=Elongation factor Tu; Short=EF-Tu gb|ABR89570.1| EF-Tu elongation factor [Janthinobacterium sp. Marseille] gb|ABR89588.1| EF-Tu elongation factor [Janthinobacterium sp. Marseille] Length = 396 Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/395 (95%), Positives = 387/395 (97%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAK YDQID APEEKARG Sbjct: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKGYDQIDNAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINT+HVEYET +RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTSHVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LLSRQVGVPYIIVFLNKADMVDD ELLELVEMEVRELL+KYEFPGDDLPI+KGSAKLALE Sbjct: 121 LLSRQVGVPYIIVFLNKADMVDDAELLELVEMEVRELLSKYEFPGDDLPIVKGSAKLALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GDTGPLGEQAI+ALA ALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGR+ERGI+K Sbjct: 181 GDTGPLGEQAILALANALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRIERGIIK 240 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VGE ++IVGIRDTQ T CTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS Sbjct: 241 VGEEIEIVGIRDTQKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS Sbjct: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKIL 395 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKI+ Sbjct: 361 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKII 395 >ref|YP_004358930.1| Translation elongation factor Tu [Burkholderia gladioli BSR3] ref|YP_004358952.1| Translation elongation factor Tu [Burkholderia gladioli BSR3] gb|AEA58974.1| Translation elongation factor Tu [Burkholderia gladioli BSR3] gb|AEA58996.1| Translation elongation factor Tu [Burkholderia gladioli BSR3] Length = 396 Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/395 (92%), Positives = 378/395 (95%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAK KFERTKPHVNVGTIGHVDHGKTTLTAAIATVLS KFGGEAK YD+IDAAPEEKARG Sbjct: 1 MAKEKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSSKFGGEAKKYDEIDAAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINTAH+EYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTAHIEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LL+RQVGVPYIIVFLNK DMVDD ELLELVEMEVRELL+KY+FPGDD PIIKGSAKLALE Sbjct: 121 LLARQVGVPYIIVFLNKCDMVDDAELLELVEMEVRELLSKYDFPGDDTPIIKGSAKLALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GD G LGE AIM+LA+ALDTYIPTPERAVDG FL+PVEDVFSISGRGTVVTGRVERGIVK Sbjct: 181 GDKGELGETAIMSLADALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGRVERGIVK 240 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VGE ++IVGI+DTQ T CTGVEMFRKLLDQGQAGDNVG+LLRGTKREDVERGQVLAKPGS Sbjct: 241 VGEEIEIVGIKDTQKTTCTGVEMFRKLLDQGQAGDNVGILLRGTKREDVERGQVLAKPGS 300 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 IKPH HFT E+YVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS Sbjct: 301 IKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKIL 395 ITV LI PIAMEEGLRFAIREGGRTVGAGVVAKIL Sbjct: 361 ITVKLIAPIAMEEGLRFAIREGGRTVGAGVVAKIL 395 >ref|YP_001101398.1| elongation factor Tu [Herminiimonas arsenicoxydans] ref|YP_001101410.1| elongation factor Tu [Herminiimonas arsenicoxydans] sp|A4G9U0.1|EFTU_HERAR RecName: Full=Elongation factor Tu; Short=EF-Tu emb|CAL63277.1| Elongation factor Tu-B (EF-Tu-B) [Herminiimonas arsenicoxydans] emb|CAL63289.1| Elongation factor Tu-B (EF-Tu-B) [Herminiimonas arsenicoxydans] Length = 396 Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/395 (94%), Positives = 385/395 (97%) Query: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKAYDQIDAAPEEKARG 60 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAK YDQID APEEKARG Sbjct: 1 MAKGKFERTKPHVNVGTIGHVDHGKTTLTAAIATVLSKKFGGEAKGYDQIDNAPEEKARG 60 Query: 61 ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 ITINT+HVEYET RHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI Sbjct: 61 ITINTSHVEYETTTRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI 120 Query: 121 LLSRQVGVPYIIVFLNKADMVDDEELLELVEMEVRELLTKYEFPGDDLPIIKGSAKLALE 180 LL+RQVGVPYIIVFLNK DMVDD ELLELVEMEVRELL+KYEFPGDDLPIIKGSAKLALE Sbjct: 121 LLARQVGVPYIIVFLNKCDMVDDAELLELVEMEVRELLSKYEFPGDDLPIIKGSAKLALE 180 Query: 181 GDTGPLGEQAIMALAEALDTYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRVERGIVK 240 GD GPLGE AI+ALA+ALD+YIPTPERAVDGAFLLPVEDVFSISGRGTVVTGR+ERGIVK Sbjct: 181 GDQGPLGEAAILALADALDSYIPTPERAVDGAFLLPVEDVFSISGRGTVVTGRIERGIVK 240 Query: 241 VGEALQIVGIRDTQDTVCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 VGE+L+IVGIRDTQ T CTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS Sbjct: 241 VGESLEIVGIRDTQVTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREDVERGQVLAKPGS 300 Query: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS Sbjct: 301 IKPHKHFTGEIYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGSIELPKDKEMVMPGDNVS 360 Query: 361 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKIL 395 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKI+ Sbjct: 361 ITVMLINPIAMEEGLRFAIREGGRTVGAGVVAKII 395