BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0320.p         (105 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773547.1| 30S ribosomal protein S10 [Herbaspirillum se...   207   5e-52
ref|YP_004751060.1| 30S ribosomal protein S10p (S20e) [Collimona...   204   5e-51
ref|YP_001355102.1| small subunit ribosomal protein S10 [Janthin...   199   1e-49
ref|YP_001101397.1| 30S ribosomal protein S10 [Herminiimonas ars...   198   2e-49
ref|ZP_04577844.1| ribosomal protein S10 [Oxalobacter formigenes...   198   3e-49

>ref|YP_003773547.1| 30S ribosomal protein S10 [Herbaspirillum seropedicae SmR1]
 emb|CAM32589.1| 30S ribosomal subunit protein S10 [Herbaspirillum seropedicae]
 gb|ADJ61639.1| 30S ribosomal subunit S10 protein [Herbaspirillum seropedicae SmR1]
          Length = 105

 Score =  207 bits (526), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 104/105 (99%), Positives = 104/105 (99%)

Query: 1   MSVPSQKIRIRLKAFDYRLIDQSAQEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVN 60
           MSVPSQKIRIRLKAFDYRLIDQSA EIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVN
Sbjct: 1   MSVPSQKIRIRLKAFDYRLIDQSALEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVN 60

Query: 61  KTSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 105
           KTSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ
Sbjct: 61  KTSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 105


>ref|YP_004751060.1| 30S ribosomal protein S10p (S20e) [Collimonas fungivorans Ter331]
 gb|AEK60237.1| SSU ribosomal protein S10p (S20e) [Collimonas fungivorans Ter331]
          Length = 105

 Score =  204 bits (518), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 101/105 (96%), Positives = 103/105 (98%)

Query: 1   MSVPSQKIRIRLKAFDYRLIDQSAQEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVN 60
           MS  +QKIRIRLKAFDY+LIDQSAQEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVN
Sbjct: 1   MSAANQKIRIRLKAFDYKLIDQSAQEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVN 60

Query: 61  KTSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 105
           KTSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ
Sbjct: 61  KTSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 105


>ref|YP_001355102.1| small subunit ribosomal protein S10 [Janthinobacterium sp.
           Marseille]
 gb|ABR88719.1| small subunit ribosomal protein S10 [Janthinobacterium sp.
           Marseille]
          Length = 110

 Score =  199 bits (507), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 100/104 (96%), Positives = 101/104 (97%)

Query: 2   SVPSQKIRIRLKAFDYRLIDQSAQEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVNK 61
           S P+QKIRIRLKAFDYRLIDQSA EIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVNK
Sbjct: 7   SAPNQKIRIRLKAFDYRLIDQSALEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVNK 66

Query: 62  TSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 105
           TSRDQFEIRTH RLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ
Sbjct: 67  TSRDQFEIRTHVRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 110


>ref|YP_001101397.1| 30S ribosomal protein S10 [Herminiimonas arsenicoxydans]
 emb|CAL63276.1| 30S ribosomal subunit protein S10 [Herminiimonas arsenicoxydans]
          Length = 110

 Score =  198 bits (504), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 99/104 (95%), Positives = 101/104 (97%)

Query: 2   SVPSQKIRIRLKAFDYRLIDQSAQEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVNK 61
           S P+QKIRIRLKAFDYRLIDQSA EIV+TAKRTGAVVKGPVPLPTRIQRFDVLRSPHVNK
Sbjct: 7   SAPNQKIRIRLKAFDYRLIDQSALEIVETAKRTGAVVKGPVPLPTRIQRFDVLRSPHVNK 66

Query: 62  TSRDQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 105
           TSRDQFEIRTH RLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ
Sbjct: 67  TSRDQFEIRTHVRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 110


>ref|ZP_04577844.1| ribosomal protein S10 [Oxalobacter formigenes HOxBLS]
 ref|ZP_04579994.1| ribosomal protein S10 [Oxalobacter formigenes OXCC13]
 gb|EEO28806.1| ribosomal protein S10 [Oxalobacter formigenes HOxBLS]
 gb|EEO30967.1| ribosomal protein S10 [Oxalobacter formigenes OXCC13]
          Length = 103

 Score =  198 bits (503), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 96/101 (95%), Positives = 101/101 (100%)

Query: 5   SQKIRIRLKAFDYRLIDQSAQEIVDTAKRTGAVVKGPVPLPTRIQRFDVLRSPHVNKTSR 64
           +QKIRIRLKAFDY+LIDQSAQEI+DTAKRTGAVVKGPVPLPTRIQRFD+LRSPHVNKTSR
Sbjct: 3   NQKIRIRLKAFDYKLIDQSAQEIIDTAKRTGAVVKGPVPLPTRIQRFDILRSPHVNKTSR 62

Query: 65  DQFEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ 105
           DQFEIRTHQRLMDI+DPTDKTVDALMKLDLPAGVDVEIKLQ
Sbjct: 63  DQFEIRTHQRLMDIIDPTDKTVDALMKLDLPAGVDVEIKLQ 103