BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0316.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004751063.1| 50S ribosomal protein L23p (L23Ae) [Collimon...   188   2e-46
ref|YP_001101394.1| 50S ribosomal protein L23 [Herminiimonas ars...   186   8e-46
ref|YP_003773550.1| 50S ribosomal protein L23 [Herbaspirillum se...   186   9e-46
ref|YP_001355099.1| 50S ribosomal protein L23 [Janthinobacterium...   183   9e-45
ref|ZP_08272690.1| LSU ribosomal protein L23p (L23Ae) [Oxalobact...   177   5e-43

>ref|YP_004751063.1| 50S ribosomal protein L23p (L23Ae) [Collimonas fungivorans Ter331]
 gb|AEK60240.1| LSU ribosomal protein L23p (L23Ae) [Collimonas fungivorans Ter331]
          Length = 104

 Score =  188 bits (477), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 94/104 (90%), Positives = 98/104 (94%)

Query: 1   MNAIKHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQVE 60
           MNAIKHSEERL+KVLLAPVISEKAT VAEKNEQVVF +  DATKLEVKAAVELLFKVQVE
Sbjct: 1   MNAIKHSEERLMKVLLAPVISEKATMVAEKNEQVVFRIAPDATKLEVKAAVELLFKVQVE 60

Query: 61  SVQVANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           SVQVANR GKQKRSG+S+GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 61  SVQVANRLGKQKRSGKSMGRRNHTRRAFVCLKPGQEINFTEEAK 104


>ref|YP_001101394.1| 50S ribosomal protein L23 [Herminiimonas arsenicoxydans]
 sp|A4G9T6.1|RL23_HERAR RecName: Full=50S ribosomal protein L23
 emb|CAL63273.1| 50S ribosomal subunit protein L23 [Herminiimonas arsenicoxydans]
          Length = 105

 Score =  186 bits (473), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 94/101 (93%), Positives = 96/101 (95%)

Query: 4   IKHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQVESVQ 63
           IKHSEERL+KVLLAPVISEKATFVAEKNEQVVFLV  DATKLE+KAAVELLFKVQVESVQ
Sbjct: 5   IKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVMPDATKLEIKAAVELLFKVQVESVQ 64

Query: 64  VANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           VANRQGKQKRSGR  GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 65  VANRQGKQKRSGRFNGRRNHTRRAFVCLKPGQEINFTEEAK 105


>ref|YP_003773550.1| 50S ribosomal protein L23 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61642.1| 50S ribosomal subunit L23 protein [Herbaspirillum seropedicae SmR1]
          Length = 105

 Score =  186 bits (472), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 96/105 (91%), Positives = 100/105 (95%), Gaps = 1/105 (0%)

Query: 1   MNAI-KHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQV 59
           MNAI KHSEERL+KVLLAPVISEKATFVAEKNEQVVFLV +DATKLEVKAAVELLFKV+V
Sbjct: 1   MNAIVKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVAKDATKLEVKAAVELLFKVEV 60

Query: 60  ESVQVANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           ESVQVANRQGKQKRS   +GRRNHTRRAFVSLKPGQEINFTEEAK
Sbjct: 61  ESVQVANRQGKQKRSRNGMGRRNHTRRAFVSLKPGQEINFTEEAK 105


>ref|YP_001355099.1| 50S ribosomal protein L23 [Janthinobacterium sp. Marseille]
 sp|A6T3K2.1|RL23_JANMA RecName: Full=50S ribosomal protein L23
 gb|ABR88667.1| large subunit ribosomal protein L23 [Janthinobacterium sp.
           Marseille]
          Length = 105

 Score =  183 bits (464), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 95/105 (90%), Positives = 98/105 (93%), Gaps = 1/105 (0%)

Query: 1   MNAI-KHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQV 59
           M+AI KHSEERL+KVLLAPVISEKATFVAEKNEQVVFLV  DATK E+KAAVELLFKVQV
Sbjct: 1   MSAILKHSEERLMKVLLAPVISEKATFVAEKNEQVVFLVMPDATKPEIKAAVELLFKVQV 60

Query: 60  ESVQVANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           ESVQVANRQGKQKRSGR  GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 61  ESVQVANRQGKQKRSGRFNGRRNHTRRAFVCLKPGQEINFTEEAK 105


>ref|ZP_08272690.1| LSU ribosomal protein L23p (L23Ae) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF33842.1| LSU ribosomal protein L23p (L23Ae) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 105

 Score =  177 bits (449), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 89/101 (88%), Positives = 95/101 (94%)

Query: 4   IKHSEERLLKVLLAPVISEKATFVAEKNEQVVFLVTQDATKLEVKAAVELLFKVQVESVQ 63
           +K SEERL+KVLLAPVISEKATFVAEKNEQVVFL+  DATKLEVKAAVELLFKV+VESVQ
Sbjct: 5   LKFSEERLMKVLLAPVISEKATFVAEKNEQVVFLIMPDATKLEVKAAVELLFKVEVESVQ 64

Query: 64  VANRQGKQKRSGRSVGRRNHTRRAFVSLKPGQEINFTEEAK 104
           VANRQGK+KRSG+  GRRNHTRRAFV LKPGQEINFTEEAK
Sbjct: 65  VANRQGKKKRSGKFNGRRNHTRRAFVCLKPGQEINFTEEAK 105