BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0310.p         (139 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001355094.1| 50S ribosomal protein L16 [Janthinobacterium...   278   1e-73
ref|YP_003773555.1| 50S ribosomal protein L16 [Herbaspirillum se...   277   4e-73
ref|YP_001101389.1| 50S ribosomal protein L16 [Herminiimonas ars...   277   5e-73
ref|YP_004751068.1| 50S ribosomal protein L16p (L10e) [Collimona...   274   3e-72
ref|ZP_04580002.1| large subunit ribosomal protein L16 [Oxalobac...   263   5e-69

>ref|YP_001355094.1| 50S ribosomal protein L16 [Janthinobacterium sp. Marseille]
 sp|A6T3J7.1|RL16_JANMA RecName: Full=50S ribosomal protein L16
 gb|ABR89955.1| large subunit ribosomal protein L16 [Janthinobacterium sp.
           Marseille]
          Length = 139

 Score =  278 bits (712), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 136/139 (97%), Positives = 138/139 (99%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKA+GRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAIGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIR+FPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRIFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPL TTFVVRQVGQ
Sbjct: 121 LAAAKLPLLTTFVVRQVGQ 139


>ref|YP_003773555.1| 50S ribosomal protein L16 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61647.1| 50S ribosomal subunit L16 protein [Herbaspirillum seropedicae SmR1]
          Length = 139

 Score =  277 bits (708), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 135/139 (97%), Positives = 138/139 (99%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQPARRKYRKEQKGRNTGISH+RGTAVSFG+FGLKA GRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPARRKYRKEQKGRNTGISHTRGTAVSFGDFGLKATGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGK+LYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKVLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPLSTTFVVRQVGQ
Sbjct: 121 LAAAKLPLSTTFVVRQVGQ 139


>ref|YP_001101389.1| 50S ribosomal protein L16 [Herminiimonas arsenicoxydans]
 sp|A4G9T1.1|RL16_HERAR RecName: Full=50S ribosomal protein L16
 emb|CAL63268.1| 50S ribosomal subunit protein L16 [Herminiimonas arsenicoxydans]
          Length = 139

 Score =  277 bits (708), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 135/139 (97%), Positives = 137/139 (98%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKA+GRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAIGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIR+FPDKPIS KPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRIFPDKPISNKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPL TTFVVRQVGQ
Sbjct: 121 LAAAKLPLLTTFVVRQVGQ 139


>ref|YP_004751068.1| 50S ribosomal protein L16p (L10e) [Collimonas fungivorans Ter331]
 gb|AEK60245.1| LSU ribosomal protein L16p (L10e) [Collimonas fungivorans Ter331]
          Length = 139

 Score =  274 bits (701), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 133/139 (95%), Positives = 136/139 (97%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQPARRKYRKEQKGRN GISHSRGTAVSFGEFGLKA+GRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPARRKYRKEQKGRNKGISHSRGTAVSFGEFGLKAIGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIR+FPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDE LAREAFR
Sbjct: 61  RGGRIWIRIFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDETLAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPL TTFVVRQ+GQ
Sbjct: 121 LAAAKLPLLTTFVVRQIGQ 139


>ref|ZP_04580002.1| large subunit ribosomal protein L16 [Oxalobacter formigenes OXCC13]
 gb|EEO30975.1| large subunit ribosomal protein L16 [Oxalobacter formigenes OXCC13]
          Length = 139

 Score =  263 bits (673), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 127/139 (91%), Positives = 134/139 (96%)

Query: 1   MLQPARRKYRKEQKGRNTGISHSRGTAVSFGEFGLKAVGRGRITARQIEAARRAMTRHIK 60
           MLQP+RRKYRKEQKGRNTGISH RGT VSFG+FGLKAVGRGRITARQIEAARRAMTRHIK
Sbjct: 1   MLQPSRRKYRKEQKGRNTGISHERGTKVSFGDFGLKAVGRGRITARQIEAARRAMTRHIK 60

Query: 61  RGGRIWIRVFPDKPISQKPAEVRMGNGKGNPEYYVAEIQPGKMLYEMDGVDEALAREAFR 120
           RGGRIWIRVFPDKPIS+KPAEVRMG+GKGNPEYYVAEI+PGK+LYEMDGVDEALAREAFR
Sbjct: 61  RGGRIWIRVFPDKPISEKPAEVRMGSGKGNPEYYVAEIRPGKVLYEMDGVDEALAREAFR 120

Query: 121 LAAAKLPLSTTFVVRQVGQ 139
           LAAAKLPL T FV RQ+GQ
Sbjct: 121 LAAAKLPLQTVFVTRQIGQ 139