BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0305.p         (154 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001101384.1| 50S ribosomal protein L5 [Herminiimonas arse...   308   1e-82
ref|YP_004751073.1| 50S ribosomal protein L5p (L11e) [Collimonas...   308   1e-82
ref|YP_001355089.1| large subunit ribosomal protein L5 [Janthino...   308   2e-82
ref|YP_003773560.1| 50S ribosomal protein L5 [Herbaspirillum ser...   308   2e-82
gb|EGD06553.1| 50S ribosomal protein L5 [Burkholderia sp. TJI49]      292   1e-77

>ref|YP_001101384.1| 50S ribosomal protein L5 [Herminiimonas arsenicoxydans]
 sp|A4G9S6.1|RL5_HERAR RecName: Full=50S ribosomal protein L5
 emb|CAL63263.1| 50S ribosomal subunit protein L5 [Herminiimonas arsenicoxydans]
          Length = 179

 Score =  308 bits (790), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 149/154 (96%), Positives = 154/154 (100%)

Query: 1   MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 60
           MEVPRILKITLNMGLSEA+ADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI
Sbjct: 26  MEVPRILKITLNMGLSEAIADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 85

Query: 61  GCMVTLRGAQMYEFLDRFITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK 120
           GCMVTLRGAQMYEFLDRFITVALPRVRDFRG+SG+AFDGRGNYNIGVKEQIIFPEIEYDK
Sbjct: 86  GCMVTLRGAQMYEFLDRFITVALPRVRDFRGISGKAFDGRGNYNIGVKEQIIFPEIEYDK 145

Query: 121 IDALRGLNISITTTAKTDDEAKSLLAAFKFPFRN 154
           IDALRG+NISITTTAKTDDEAK+LLAAFKFPFRN
Sbjct: 146 IDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179


>ref|YP_004751073.1| 50S ribosomal protein L5p (L11e) [Collimonas fungivorans Ter331]
 gb|AEK60250.1| LSU ribosomal protein L5p (L11e) [Collimonas fungivorans Ter331]
          Length = 179

 Score =  308 bits (790), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 150/154 (97%), Positives = 152/154 (98%)

Query: 1   MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 60
           MEVPRILKITLNMGLSEA+ADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI
Sbjct: 26  MEVPRILKITLNMGLSEAIADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 85

Query: 61  GCMVTLRGAQMYEFLDRFITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK 120
           GCMVTLRGAQMYEFLDR ITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK
Sbjct: 86  GCMVTLRGAQMYEFLDRLITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK 145

Query: 121 IDALRGLNISITTTAKTDDEAKSLLAAFKFPFRN 154
           ID LRG+NISITTTAKTDDEAKSLLAAFKFPFRN
Sbjct: 146 IDVLRGMNISITTTAKTDDEAKSLLAAFKFPFRN 179


>ref|YP_001355089.1| large subunit ribosomal protein L5 [Janthinobacterium sp.
           Marseille]
 sp|A6T3J2.1|RL5_JANMA RecName: Full=50S ribosomal protein L5
 gb|ABR88635.1| large subunit ribosomal protein L5 [Janthinobacterium sp.
           Marseille]
          Length = 179

 Score =  308 bits (789), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/154 (97%), Positives = 153/154 (99%)

Query: 1   MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 60
           MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI
Sbjct: 26  MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 85

Query: 61  GCMVTLRGAQMYEFLDRFITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK 120
           GCMVTLRGA MYEFLDRFITVALPRVRDFRGVSG+AFDGRGNYNIGVKEQIIFPEIEYDK
Sbjct: 86  GCMVTLRGAHMYEFLDRFITVALPRVRDFRGVSGKAFDGRGNYNIGVKEQIIFPEIEYDK 145

Query: 121 IDALRGLNISITTTAKTDDEAKSLLAAFKFPFRN 154
           IDALRG+NISITTTAKTDDEAK+LLAAFKFPFRN
Sbjct: 146 IDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179


>ref|YP_003773560.1| 50S ribosomal protein L5 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61652.1| 50S ribosomal subunit L5 protein [Herbaspirillum seropedicae SmR1]
          Length = 179

 Score =  308 bits (788), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 150/154 (97%), Positives = 153/154 (99%)

Query: 1   MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 60
           MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI
Sbjct: 26  MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 85

Query: 61  GCMVTLRGAQMYEFLDRFITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK 120
           GCMVTLRGA+MYEFLDR ITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK
Sbjct: 86  GCMVTLRGARMYEFLDRLITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK 145

Query: 121 IDALRGLNISITTTAKTDDEAKSLLAAFKFPFRN 154
           IDALRG+NISITTTAKTDDEAK+LLAAFKFPFRN
Sbjct: 146 IDALRGMNISITTTAKTDDEAKALLAAFKFPFRN 179


>gb|EGD06553.1| 50S ribosomal protein L5 [Burkholderia sp. TJI49]
          Length = 179

 Score =  292 bits (747), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 141/154 (91%), Positives = 148/154 (96%)

Query: 1   MEVPRILKITLNMGLSEAVADKKIIEHAVGDLTKIAGQKPVVTKARKAIAGFKIREGYPI 60
           MEVPR+ KITLNMGL EAVADKK+IEHAVGDL KIAGQKPVVTKARKAIAGFKIREGYP+
Sbjct: 26  MEVPRLTKITLNMGLGEAVADKKVIEHAVGDLAKIAGQKPVVTKARKAIAGFKIREGYPV 85

Query: 61  GCMVTLRGAQMYEFLDRFITVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIEYDK 120
           G MVTLRG  MYEFLDRF+TVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEI+YDK
Sbjct: 86  GAMVTLRGQAMYEFLDRFVTVALPRVRDFRGVSGRAFDGRGNYNIGVKEQIIFPEIDYDK 145

Query: 121 IDALRGLNISITTTAKTDDEAKSLLAAFKFPFRN 154
           IDALRGLNISITTTAKTDDEAK+LLA+FKFPFRN
Sbjct: 146 IDALRGLNISITTTAKTDDEAKALLASFKFPFRN 179