BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0300.p         (172 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001355084.1| 30S ribosomal protein S5 [Janthinobacterium ...   330   5e-89
ref|YP_001101379.1| 30S ribosomal protein S5 [Herminiimonas arse...   329   1e-88
ref|ZP_08274151.1| SSU ribosomal protein S5p (S2e) [Oxalobactera...   329   1e-88
ref|YP_003773565.1| 30S ribosomal protein S5 [Herbaspirillum ser...   326   1e-87
ref|YP_004751078.1| 30S ribosomal protein S5p (S2e) [Collimonas ...   325   1e-87

>ref|YP_001355084.1| 30S ribosomal protein S5 [Janthinobacterium sp. Marseille]
 sp|A6T3I7.1|RS5_JANMA RecName: Full=30S ribosomal protein S5
 gb|ABR88390.1| small subunit ribosomal protein S5 [Janthinobacterium sp.
           Marseille]
          Length = 172

 Score =  330 bits (846), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 167/172 (97%), Positives = 169/172 (98%)

Query: 1   MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60
           MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK
Sbjct: 1   MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60

Query: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMSPAKDGTGVIAGGPMRAI 120
           EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLM PAKDGTGVIAGGPMRAI
Sbjct: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMLPAKDGTGVIAGGPMRAI 120

Query: 121 FEVMGVTNVVAKSNGSTNPYNMVRATLDGLAKMNTPAEIAAKRGKSVEDILG 172
           FEVMGVTNVVAKS GSTNPYNMVRATLDGLAKMNT +EIAAKRGKSVE+ILG
Sbjct: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLAKMNTASEIAAKRGKSVEEILG 172


>ref|YP_001101379.1| 30S ribosomal protein S5 [Herminiimonas arsenicoxydans]
 sp|A4G9S1.1|RS5_HERAR RecName: Full=30S ribosomal protein S5
 emb|CAL63258.1| 30S ribosomal subunit protein S5 [Herminiimonas arsenicoxydans]
          Length = 172

 Score =  329 bits (843), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 165/172 (95%), Positives = 170/172 (98%)

Query: 1   MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60
           MAKMQSKMQS+KPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK
Sbjct: 1   MAKMQSKMQSEKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60

Query: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMSPAKDGTGVIAGGPMRAI 120
           EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLM PAK+GTGVIAGGPMRAI
Sbjct: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMLPAKEGTGVIAGGPMRAI 120

Query: 121 FEVMGVTNVVAKSNGSTNPYNMVRATLDGLAKMNTPAEIAAKRGKSVEDILG 172
           FEVMGVTNVVAKS GSTNPYNMVRATL+GLAKMNTP+EIAAKRGKSVE+ILG
Sbjct: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLEGLAKMNTPSEIAAKRGKSVEEILG 172


>ref|ZP_08274151.1| SSU ribosomal protein S5p (S2e) [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF32381.1| SSU ribosomal protein S5p (S2e) [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 172

 Score =  329 bits (843), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 164/171 (95%), Positives = 171/171 (100%)

Query: 1   MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60
           MAKMQSKMQS+KPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDG+GRIGMGKGKSK
Sbjct: 1   MAKMQSKMQSEKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGEGRIGMGKGKSK 60

Query: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMSPAKDGTGVIAGGPMRAI 120
           EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLM+PAK+GTGVIAGGPMRAI
Sbjct: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMAPAKEGTGVIAGGPMRAI 120

Query: 121 FEVMGVTNVVAKSNGSTNPYNMVRATLDGLAKMNTPAEIAAKRGKSVEDIL 171
           FEVMGVTNVVAKSNGSTNPYNMVRATL+GLAKMNTP++IAAKRGKSVEDIL
Sbjct: 121 FEVMGVTNVVAKSNGSTNPYNMVRATLNGLAKMNTPSDIAAKRGKSVEDIL 171


>ref|YP_003773565.1| 30S ribosomal protein S5 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61657.1| 30S ribosomal subunit S5 protein [Herbaspirillum seropedicae SmR1]
          Length = 172

 Score =  326 bits (835), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 163/172 (94%), Positives = 169/172 (98%)

Query: 1   MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60
           MAKMQSK QSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK
Sbjct: 1   MAKMQSKTQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60

Query: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMSPAKDGTGVIAGGPMRAI 120
           EVPVAVQKAMEEARRK+IKVTLKNGT+QHTV GKHGASSV++SPAKDGTGVIAGGPMRAI
Sbjct: 61  EVPVAVQKAMEEARRKLIKVTLKNGTVQHTVIGKHGASSVMISPAKDGTGVIAGGPMRAI 120

Query: 121 FEVMGVTNVVAKSNGSTNPYNMVRATLDGLAKMNTPAEIAAKRGKSVEDILG 172
           FEVMGVTNVVAKS GSTNPYNMVRATLDGL+KMNTPAEIAAKRGKSVE+ILG
Sbjct: 121 FEVMGVTNVVAKSTGSTNPYNMVRATLDGLSKMNTPAEIAAKRGKSVEEILG 172


>ref|YP_004751078.1| 30S ribosomal protein S5p (S2e) [Collimonas fungivorans Ter331]
 gb|AEK60255.1| SSU ribosomal protein S5p (S2e) [Collimonas fungivorans Ter331]
          Length = 172

 Score =  325 bits (834), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 162/172 (94%), Positives = 169/172 (98%)

Query: 1   MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60
           MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK
Sbjct: 1   MAKMQSKMQSDKPDDGMREKMIAVNRVTKVVKGGRIMGFAALAVVGDGDGRIGMGKGKSK 60

Query: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHTVTGKHGASSVLMSPAKDGTGVIAGGPMRAI 120
           EVPVAVQKAMEEARRKMIKVTLKNGTLQH ++GKHGASSVLM PAKDGTGVIAGGPMRAI
Sbjct: 61  EVPVAVQKAMEEARRKMIKVTLKNGTLQHAISGKHGASSVLMLPAKDGTGVIAGGPMRAI 120

Query: 121 FEVMGVTNVVAKSNGSTNPYNMVRATLDGLAKMNTPAEIAAKRGKSVEDILG 172
           FEV+GVTNVVAKS GSTNPYNMVRATL+GL+KMNTP+EIAAKRGKSVE+ILG
Sbjct: 121 FEVLGVTNVVAKSTGSTNPYNMVRATLNGLSKMNTPSEIAAKRGKSVEEILG 172