BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0291.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003773575.1| 50S ribosomal protein L17 [Herbaspirillum se...   204   4e-51
ref|YP_001355074.1| large subunit ribosomal protein L17 [Janthin...   195   2e-48
ref|YP_004751088.1| 50S ribosomal protein L17p [Collimonas fungi...   193   8e-48
ref|YP_001101370.1| 50S ribosomal protein L17 [Herminiimonas ars...   190   6e-47
ref|ZP_04580021.1| large subunit ribosomal protein L17 [Oxalobac...   187   4e-46

>ref|YP_003773575.1| 50S ribosomal protein L17 [Herbaspirillum seropedicae SmR1]
 gb|ADJ61667.1| 50S ribosomal subunit L17 protein [Herbaspirillum seropedicae SmR1]
          Length = 131

 Score =  204 bits (519), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 102/112 (91%), Positives = 108/112 (96%), Gaps = 2/112 (1%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAF+RLRDREIVGKL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFNRLRDREIVGKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSE--EAPSVE 110
           FSELGPRYAARNGGYLRILKMGFR GDNAPMAFVELVDRP+V++  +AP+ E
Sbjct: 80  FSELGPRYAARNGGYLRILKMGFRQGDNAPMAFVELVDRPEVTDAADAPTAE 131


>ref|YP_001355074.1| large subunit ribosomal protein L17 [Janthinobacterium sp.
           Marseille]
 sp|A6T3H7.1|RL17_JANMA RecName: Full=50S ribosomal protein L17
 gb|ABR89070.1| large subunit ribosomal protein L17 [Janthinobacterium sp.
           Marseille]
          Length = 131

 Score =  195 bits (496), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 95/104 (91%), Positives = 101/104 (97%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRV+EPILTLGKTD+LANKRLAF+RLRDRE+V KL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVIEPILTLGKTDSLANKRLAFNRLRDREMVVKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSE 104
           F+ELGPRYA RNGGYLRILKMGFRVGDNAPMAFVELVDRPD +E
Sbjct: 80  FAELGPRYANRNGGYLRILKMGFRVGDNAPMAFVELVDRPDTTE 123


>ref|YP_004751088.1| 50S ribosomal protein L17p [Collimonas fungivorans Ter331]
 gb|AEK60265.1| LSU ribosomal protein L17p [Collimonas fungivorans Ter331]
          Length = 131

 Score =  193 bits (490), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 94/112 (83%), Positives = 106/112 (94%), Gaps = 2/112 (1%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRV+EPILTLGKTDTLANKRLAF+RLRDRE+V KL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVIEPILTLGKTDTLANKRLAFARLRDREMVLKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSE--EAPSVE 110
           F+ELGPRYA RNGGYLRILKMGFRVGDNAPMA++EL+DRP++S+  E P+ +
Sbjct: 80  FAELGPRYANRNGGYLRILKMGFRVGDNAPMAYIELMDRPEISDGAEVPTAD 131


>ref|YP_001101370.1| 50S ribosomal protein L17 [Herminiimonas arsenicoxydans]
 sp|A4G9R2.1|RL17_HERAR RecName: Full=50S ribosomal protein L17
 emb|CAL63249.1| 50S ribosomal protein L17 [Herminiimonas arsenicoxydans]
          Length = 131

 Score =  190 bits (483), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 91/104 (87%), Positives = 100/104 (96%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRV+EPILTLGKTD+LANKRLAF+RLRDRE+V KL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVIEPILTLGKTDSLANKRLAFNRLRDREMVVKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSE 104
           F+ELGPRYA RNGGYLRILKMGFR GDNAPMAF+EL+DRP+ +E
Sbjct: 80  FAELGPRYANRNGGYLRILKMGFRAGDNAPMAFIELLDRPETTE 123


>ref|ZP_04580021.1| large subunit ribosomal protein L17 [Oxalobacter formigenes OXCC13]
 gb|EEO30994.1| large subunit ribosomal protein L17 [Oxalobacter formigenes OXCC13]
          Length = 130

 Score =  187 bits (475), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 91/105 (86%), Positives = 100/105 (95%)

Query: 1   MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPILTLGKTDTLANKRLAFSRLRDREIVGKL 60
           MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPI+TLGK D++ANKRLAF+RLRDREIV KL
Sbjct: 20  MLRNMTVSLLRHEAIKTTLPKAKELRRVVEPIITLGKIDSVANKRLAFNRLRDREIVVKL 79

Query: 61  FSELGPRYAARNGGYLRILKMGFRVGDNAPMAFVELVDRPDVSEE 105
           F+ELGPR+A RNGGYLRILKMGFRVGDNAPMA+VEL+DRP+  EE
Sbjct: 80  FNELGPRFANRNGGYLRILKMGFRVGDNAPMAYVELLDRPEQPEE 124