BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0272.p (385 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773589.1| ABC transporter permease [Herbaspirillum ser... 672 0.0 ref|YP_004751099.1| cytochrome c-type biogenesis protein CcsA/Re... 647 0.0 ref|ZP_08274533.1| Cytochrome c-type biogenesis protein CcsA/Res... 644 0.0 ref|YP_001355064.1| cytochrome c assembly family protein [Janthi... 644 0.0 ref|YP_001101362.1| putative transmembrane cytochrome C-type bio... 632 e-179 >ref|YP_003773589.1| ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ61681.1| ABC-type transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 384 Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/385 (86%), Positives = 360/385 (93%), Gaps = 1/385 (0%) Query: 1 MELSQTHARAELQDIGFFKRLSVLDWIYAAALVAASLFALSRYGGHMDYYEKAVLLLAAP 60 MEL+Q H +A ++ GFF+RL VLDWIYAAALVA SL+A R+G +MDYYEKAVLLLAAP Sbjct: 1 MELTQ-HNQAYAEEQGFFRRLGVLDWIYAAALVAGSLYAFGRFGSYMDYYEKAVLLLAAP 59 Query: 61 TFAWLGWHWKSVRWLMALLAVLALSAIAMYGGALDMADKKFFLKYLLSSQSAILWMSALF 120 TFAWLGWHWK VR LM ++AVL+L AIA+YGGAL++ADKKFFLKY+LSSQSAILWMSALF Sbjct: 60 TFAWLGWHWKPVRLLMLVIAVLSLGAIALYGGALELADKKFFLKYMLSSQSAILWMSALF 119 Query: 121 VLSTLFYWVGLVARSGTGAALGSKLCWAAVVLGFTGMLVRWYESYLIGPDIGHIPISNLY 180 LSTLFYW GL +GTG A+GS+LCWAAVVLGFTG++VRWYESYLIGPD+GHIPISNLY Sbjct: 120 CLSTLFYWGGLATTAGTGNAIGSRLCWAAVVLGFTGLMVRWYESYLIGPDVGHIPISNLY 179 Query: 181 EVFILFCMITALFYLYYEERYATRQLGAFVLLVISAAVGFLLWYTVSRDAAEIQPLVPAL 240 EVF+LFC+ITALFYLYYEERYATRQLGAFVL VI+AAV FL+WYTVSRDAAEIQPLVPAL Sbjct: 180 EVFVLFCLITALFYLYYEERYATRQLGAFVLTVITAAVAFLMWYTVSRDAAEIQPLVPAL 239 Query: 241 QSWWMKIHVPANFIGYGTFALAAMVAVAYLLKSKGYLEDRLPSLEVLDDVMYKAIAVGFA 300 QSWWMKIHVPANFIGYGTFALAAMVAVAYLL+ KGYL DRLPSLEVLDDVMYKAIAVGFA Sbjct: 240 QSWWMKIHVPANFIGYGTFALAAMVAVAYLLRQKGYLADRLPSLEVLDDVMYKAIAVGFA 299 Query: 301 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQVAAWWALV 360 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQ AAWWALV Sbjct: 300 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQAAAWWALV 359 Query: 361 GLLVTTFAFLGVNMFLSGLHSYGEL 385 GLLVTTFAFLGVNMFLSGLHSYGEL Sbjct: 360 GLLVTTFAFLGVNMFLSGLHSYGEL 384 >ref|YP_004751099.1| cytochrome c-type biogenesis protein CcsA/ResC [Collimonas fungivorans Ter331] gb|AEK60276.1| Cytochrome c-type biogenesis protein CcsA/ResC [Collimonas fungivorans Ter331] Length = 385 Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/385 (87%), Positives = 358/385 (92%), Gaps = 4/385 (1%) Query: 1 MELSQTHARAELQDIGFFKRLSVLDWIYAAALVAASLFALSRYGGHMDYYEKAVLLLAAP 60 MEL+QT++ F KRLSVLDW++A ALVAASLFAL+RYG HMDYYEK VLLLAAP Sbjct: 5 MELTQTYSPPS----SFIKRLSVLDWLFAVALVAASLFALNRYGSHMDYYEKGVLLLAAP 60 Query: 61 TFAWLGWHWKSVRWLMALLAVLALSAIAMYGGALDMADKKFFLKYLLSSQSAILWMSALF 120 TF+WLGWHWKSVRWLMALLA+L+LSAIAMYGG LDMA++KFFLKY+LSSQSAILWMS LF Sbjct: 61 TFSWLGWHWKSVRWLMALLALLSLSAIAMYGGVLDMANQKFFLKYMLSSQSAILWMSTLF 120 Query: 121 VLSTLFYWVGLVARSGTGAALGSKLCWAAVVLGFTGMLVRWYESYLIGPDIGHIPISNLY 180 LSTLF+W GLV RS GA++GSKLCWAAVV+GFTGMLVRWYESYLIG DIGHIPISNLY Sbjct: 121 FLSTLFFWGGLVTRSDFGASIGSKLCWAAVVMGFTGMLVRWYESYLIGADIGHIPISNLY 180 Query: 181 EVFILFCMITALFYLYYEERYATRQLGAFVLLVISAAVGFLLWYTVSRDAAEIQPLVPAL 240 EVF+LF +ITALFYLYYE+ Y TRQLGAFVLLVISAAVGFLLWY VSRDAAEIQPLVPAL Sbjct: 181 EVFVLFSLITALFYLYYEQHYRTRQLGAFVLLVISAAVGFLLWYMVSRDAAEIQPLVPAL 240 Query: 241 QSWWMKIHVPANFIGYGTFALAAMVAVAYLLKSKGYLEDRLPSLEVLDDVMYKAIAVGFA 300 QSWWMKIHVPANFIGYGTFAL+AMVAVAYLLKS GYL DRLP+LEVLDDVMYKAIAVGF Sbjct: 241 QSWWMKIHVPANFIGYGTFALSAMVAVAYLLKSHGYLVDRLPALEVLDDVMYKAIAVGFT 300 Query: 301 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQVAAWWALV 360 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQVAAWWAL+ Sbjct: 301 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQVAAWWALI 360 Query: 361 GLLVTTFAFLGVNMFLSGLHSYGEL 385 GLLVTTFAFLGVNMFLSGLHSYGEL Sbjct: 361 GLLVTTFAFLGVNMFLSGLHSYGEL 385 >ref|ZP_08274533.1| Cytochrome c-type biogenesis protein CcsA/ResC [Oxalobacteraceae bacterium IMCC9480] gb|EGF31994.1| Cytochrome c-type biogenesis protein CcsA/ResC [Oxalobacteraceae bacterium IMCC9480] Length = 383 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/385 (82%), Positives = 348/385 (90%), Gaps = 2/385 (0%) Query: 1 MELSQTHARAELQDIGFFKRLSVLDWIYAAALVAASLFALSRYGGHMDYYEKAVLLLAAP 60 M+L+Q A GFFK+L +DW++A LVA S +AL+R+G MDYYEK +L+LAAP Sbjct: 1 MQLTQQRPYAA--PTGFFKKLGPVDWLFAVVLVAGSFYALNRFGAFMDYYEKIILVLAAP 58 Query: 61 TFAWLGWHWKSVRWLMALLAVLALSAIAMYGGALDMADKKFFLKYLLSSQSAILWMSALF 120 FAWLGW WK +R LM LAVL+LSA+AMYGG LDMA+KKFFLKYLLSSQSAILWMS LF Sbjct: 59 VFAWLGWQWKPIRPLMLGLAVLSLSAMAMYGGVLDMANKKFFLKYLLSSQSAILWMSVLF 118 Query: 121 VLSTLFYWVGLVARSGTGAALGSKLCWAAVVLGFTGMLVRWYESYLIGPDIGHIPISNLY 180 LSTLFYW GL+ARS G+A+GSKLCWAAVV GFTGMLVRWYESYLIG D+GHIP+SNLY Sbjct: 119 FLSTLFYWGGLIARSDFGSAIGSKLCWAAVVFGFTGMLVRWYESYLIGVDVGHIPVSNLY 178 Query: 181 EVFILFCMITALFYLYYEERYATRQLGAFVLLVISAAVGFLLWYTVSRDAAEIQPLVPAL 240 EVF+LFCMITALFYLYYE+ Y TRQ+GAFV+LVISAAVGFLLWYTVSRDAAEIQPLVPAL Sbjct: 179 EVFVLFCMITALFYLYYEQHYKTRQMGAFVMLVISAAVGFLLWYTVSRDAAEIQPLVPAL 238 Query: 241 QSWWMKIHVPANFIGYGTFALAAMVAVAYLLKSKGYLEDRLPSLEVLDDVMYKAIAVGFA 300 QSWWMKIHVPANF+GYGTF+LAAMVAVAYLLKSKGYLEDRLPSLEVLDDVMYKAIAVGF Sbjct: 239 QSWWMKIHVPANFVGYGTFSLAAMVAVAYLLKSKGYLEDRLPSLEVLDDVMYKAIAVGFT 298 Query: 301 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQVAAWWALV 360 FFTIATILG LWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRG+ AAWWALV Sbjct: 299 FFTIATILGGLWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGRFAAWWALV 358 Query: 361 GLLVTTFAFLGVNMFLSGLHSYGEL 385 GLL+TTFAFLGVNMFLSGLHSYG+L Sbjct: 359 GLLITTFAFLGVNMFLSGLHSYGQL 383 >ref|YP_001355064.1| cytochrome c assembly family protein [Janthinobacterium sp. Marseille] gb|ABR90249.1| cytochrome c assembly family protein [Janthinobacterium sp. Marseille] Length = 383 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/373 (88%), Positives = 355/373 (95%) Query: 13 QDIGFFKRLSVLDWIYAAALVAASLFALSRYGGHMDYYEKAVLLLAAPTFAWLGWHWKSV 72 Q GFFKRL+ LDW+Y AAL+AASLFAL+R+G HMD YE+ +L+LAAPTFAWLGWHWKSV Sbjct: 11 QPPGFFKRLTALDWLYGAALLAASLFALNRFGHHMDIYEEVILVLAAPTFAWLGWHWKSV 70 Query: 73 RWLMALLAVLALSAIAMYGGALDMADKKFFLKYLLSSQSAILWMSALFVLSTLFYWVGLV 132 RWLMALLAVL+LSAIAMYGGAL MAD+KFFLKYLLSSQSAILWMS LF+LST+FYW GL+ Sbjct: 71 RWLMALLAVLSLSAIAMYGGALAMADQKFFLKYLLSSQSAILWMSTLFLLSTVFYWGGLI 130 Query: 133 ARSGTGAALGSKLCWAAVVLGFTGMLVRWYESYLIGPDIGHIPISNLYEVFILFCMITAL 192 RS TGA+LGSKLCWAAVV+GFTGMLVRWYESYLIG D+GHIP+SNLYEVFILFCMITAL Sbjct: 131 TRSATGASLGSKLCWAAVVMGFTGMLVRWYESYLIGADVGHIPVSNLYEVFILFCMITAL 190 Query: 193 FYLYYEERYATRQLGAFVLLVISAAVGFLLWYTVSRDAAEIQPLVPALQSWWMKIHVPAN 252 FYLYYE+ YATRQLG FVLLVISAAVGFLLWYTV+RDAAEIQPLVPALQSWWMKIHVPAN Sbjct: 191 FYLYYEQVYATRQLGPFVLLVISAAVGFLLWYTVTRDAAEIQPLVPALQSWWMKIHVPAN 250 Query: 253 FIGYGTFALAAMVAVAYLLKSKGYLEDRLPSLEVLDDVMYKAIAVGFAFFTIATILGALW 312 FIGYGTFALAAMVA+AYLLKS G L DRLP+LEVLDDVMYKAIAVGFAFFTIATILGALW Sbjct: 251 FIGYGTFALAAMVAIAYLLKSHGMLVDRLPALEVLDDVMYKAIAVGFAFFTIATILGALW 310 Query: 313 AAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQVAAWWALVGLLVTTFAFLGV 372 AAEAWGGYWSWDPKETWALIVWLNYA+WLHMRLMKGLRG++AAWWA++GLLVTTFAFLGV Sbjct: 311 AAEAWGGYWSWDPKETWALIVWLNYASWLHMRLMKGLRGKIAAWWAVIGLLVTTFAFLGV 370 Query: 373 NMFLSGLHSYGEL 385 NMFLSGLHSYGEL Sbjct: 371 NMFLSGLHSYGEL 383 >ref|YP_001101362.1| putative transmembrane cytochrome C-type biogenesis transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL63241.1| Putative cytochrome c assembly protein [Herminiimonas arsenicoxydans] Length = 383 Score = 632 bits (1629), Expect = e-179, Method: Compositional matrix adjust. Identities = 323/385 (83%), Positives = 358/385 (92%), Gaps = 2/385 (0%) Query: 1 MELSQTHARAELQDIGFFKRLSVLDWIYAAALVAASLFALSRYGGHMDYYEKAVLLLAAP 60 M+L Q Q GFFKRLS++DW+Y AL+AASLFAL+R+G HMD YE+A+L+LAAP Sbjct: 1 MDLVQEQMYT--QPPGFFKRLSMIDWLYGLALLAASLFALNRFGHHMDVYEEAILVLAAP 58 Query: 61 TFAWLGWHWKSVRWLMALLAVLALSAIAMYGGALDMADKKFFLKYLLSSQSAILWMSALF 120 TFAWLGW+WKSVRWL+A+LAVLALSA++MYGGAL M ++KFFLKYLLSSQSAILWMS LF Sbjct: 59 TFAWLGWYWKSVRWLIAVLAVLALSAVSMYGGALAMGEQKFFLKYLLSSQSAILWMSMLF 118 Query: 121 VLSTLFYWVGLVARSGTGAALGSKLCWAAVVLGFTGMLVRWYESYLIGPDIGHIPISNLY 180 +LSTLFYW GL+ RS TG ++GSKLCWAAV++GFTGMLVRWYESYLIG D+GHIP+SNLY Sbjct: 119 LLSTLFYWGGLITRSTTGGSIGSKLCWAAVIMGFTGMLVRWYESYLIGADVGHIPVSNLY 178 Query: 181 EVFILFCMITALFYLYYEERYATRQLGAFVLLVISAAVGFLLWYTVSRDAAEIQPLVPAL 240 EVFILFCMITALFYLYYE+ YATRQLG FVLLVISAAVGFLLWYTV+R+AA+IQPLVPAL Sbjct: 179 EVFILFCMITALFYLYYEQIYATRQLGPFVLLVISAAVGFLLWYTVTRNAADIQPLVPAL 238 Query: 241 QSWWMKIHVPANFIGYGTFALAAMVAVAYLLKSKGYLEDRLPSLEVLDDVMYKAIAVGFA 300 QSWWMKIHVPANFIGYGTF+LAAMVAVAYLLKS G L DRLP+LEVLDDVMYKAIAVGFA Sbjct: 239 QSWWMKIHVPANFIGYGTFSLAAMVAVAYLLKSHGILGDRLPALEVLDDVMYKAIAVGFA 298 Query: 301 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYAAWLHMRLMKGLRGQVAAWWALV 360 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYA+WLHMRLMKGLRG+VAAWWA++ Sbjct: 299 FFTIATILGALWAAEAWGGYWSWDPKETWALIVWLNYASWLHMRLMKGLRGKVAAWWAVI 358 Query: 361 GLLVTTFAFLGVNMFLSGLHSYGEL 385 GLLVTTFAFLGVNMFLSGLHSYGEL Sbjct: 359 GLLVTTFAFLGVNMFLSGLHSYGEL 383