BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0256.p (228 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773599.1| carboxy-terminal processing protease transme... 222 3e-56 ref|YP_004754711.1| carboxy-terminal processing protease [Collim... 200 1e-49 ref|YP_001354914.1| carboxyl-terminal processing protease [Janth... 189 2e-46 ref|YP_001101208.1| carboxy-terminal processing protease [Hermin... 180 2e-43 ref|ZP_04579685.1| peptidase S41A [Oxalobacter formigenes OXCC13... 158 7e-37 >ref|YP_003773599.1| carboxy-terminal processing protease transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ61691.1| carboxy-terminal processing protease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 498 Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 109/139 (78%), Positives = 121/139 (87%), Gaps = 1/139 (0%) Query: 88 LTTARYYTPNGRSIQARGIVPDIMVDEYADGDGLNGLRLREADLTKHLTNDKDKDAKEVK 147 LTTARYYTP GRSIQARGIVPDIMVDEY DGDGLNGLRLREADL+KHLTND DK A EVK Sbjct: 358 LTTARYYTPKGRSIQARGIVPDIMVDEYPDGDGLNGLRLREADLSKHLTNDTDKSA-EVK 416 Query: 148 ASTVDEKEEERLIALEKKRKPLEFGSKEDFQLAQALNHLKGQPVQVSKVKPEIRDESSKD 207 A ++DE+ EERLIA EKKRKP++FGSK+DFQL QALN LKG PV+VS KPE+R+E K+ Sbjct: 417 AKSMDEQSEERLIAAEKKRKPMDFGSKDDFQLMQALNQLKGLPVKVSNAKPEVRNEEGKN 476 Query: 208 DKPVKDIRKDNKAPPEKIE 226 D PVKD RKDNKAP EKI+ Sbjct: 477 DTPVKDERKDNKAPAEKID 495 >ref|YP_004754711.1| carboxy-terminal processing protease [Collimonas fungivorans Ter331] gb|AEK63888.1| Carboxy-terminal processing protease precursor [Collimonas fungivorans Ter331] Length = 503 Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 105/135 (77%), Positives = 112/135 (82%), Gaps = 5/135 (3%) Query: 88 LTTARYYTPNGRSIQARGIVPDIMVDEYADGDGLNGLRLREADLTKHLTNDKDKDAKEVK 147 LTTARYYTPNGRSIQA+GIVPD+MVDEYADGDGLNGLRLREADLTKHL+ND DK EVK Sbjct: 357 LTTARYYTPNGRSIQAKGIVPDVMVDEYADGDGLNGLRLREADLTKHLSNDTDK-GPEVK 415 Query: 148 ASTVDEKEE-ERLIALEKKRKPLEFGSKEDFQLAQALNHLKGQPVQVSKVKPEIRDESSK 206 A VDE EE +R+ A EKKRKPLEFGSK+DFQLAQALN LKG PVQVSKVKP+ R E K Sbjct: 416 APKVDELEEAQRIAAAEKKRKPLEFGSKDDFQLAQALNQLKGLPVQVSKVKPDNRSEGDK 475 Query: 207 DDKPVKDIRKDNKAP 221 D KP KD D AP Sbjct: 476 DSKPSKD---DKPAP 487 >ref|YP_001354914.1| carboxyl-terminal processing protease [Janthinobacterium sp. Marseille] gb|ABR89629.1| carboxyl-terminal processing protease [Janthinobacterium sp. Marseille] Length = 499 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 112/220 (50%), Positives = 144/220 (65%), Gaps = 12/220 (5%) Query: 20 YERIALDARRLIDGDQAYIGAMLSRIAQIL--NAGNHVLACTADGAHLGGERVSLL---- 73 Y R A R + A + L +I ++ N+G+ + GA +R +++ Sbjct: 281 YARREFYASRSVGDPLAKLPEALKKIPMVVLVNSGSASASEIVAGALQDHKRATIMGTQT 340 Query: 74 LARASGDFLRRL-----LPLTTARYYTPNGRSIQARGIVPDIMVDEYADGDGLNGLRLRE 128 + S +R+L + LTTARYYTP+GRSIQA+GIVPD+MVDE ADGDGLNGLRLRE Sbjct: 341 FGKGSVQTIRQLSADTAVKLTTARYYTPSGRSIQAKGIVPDLMVDETADGDGLNGLRLRE 400 Query: 129 ADLTKHLTNDKDKDAKEVKASTVDEKEEERLIALEKKRKPLEFGSKEDFQLAQALNHLKG 188 ADL KHLTNDKDK EV A+ + +EE+RL ALEKKRKPLEFGSK+DFQL QALNHLKG Sbjct: 401 ADLQKHLTNDKDK-GPEVHAAVDELEEEQRLAALEKKRKPLEFGSKDDFQLTQALNHLKG 459 Query: 189 QPVQVSKVKPEIRDESSKDDKPVKDIRKDNKAPPEKIEKK 228 PV +SK KPE + E +KP + + + KA P+ +KK Sbjct: 460 LPVVLSKAKPEPKKEEPGINKPKTEPKPEPKAEPKNGDKK 499 >ref|YP_001101208.1| carboxy-terminal processing protease [Herminiimonas arsenicoxydans] emb|CAL63087.1| Peptidase S41A, C-terminal protease [Herminiimonas arsenicoxydans] Length = 492 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 105/223 (47%), Positives = 143/223 (64%), Gaps = 16/223 (7%) Query: 17 AKSYERIALDARRLIDGDQAYIGAMLSRIAQIL--NAGNHVLACTADGAHLGGERVSLL- 73 A Y R A R + A + + +I ++ N+G+ + GA +R +++ Sbjct: 275 ASFYARREFYAARAVGDPLAKLPDAIKKIPMVVLVNSGSASASEIVAGALQDYKRATIMG 334 Query: 74 ---LARASGDFLRRL-----LPLTTARYYTPNGRSIQARGIVPDIMVDEYADGDGLNGLR 125 + S +R+L + LTTARYYTPNGRSIQA+GIVPD+MVDE ADGDGLN LR Sbjct: 335 TQTFGKGSVQTIRQLSADTAVKLTTARYYTPNGRSIQAKGIVPDLMVDETADGDGLNSLR 394 Query: 126 LREADLTKHLTNDKDKDAKEVKASTVDEKEEERLIALEKKRKPLEFGSKEDFQLAQALNH 185 LREADL KHLTNDKDK+A+ + + +E++R+ ALEKKRKPLEFGSK+DFQL QALNH Sbjct: 395 LREADLQKHLTNDKDKEAESARPGLDELEEDQRIAALEKKRKPLEFGSKDDFQLTQALNH 454 Query: 186 LKGQPVQVSKVKPEIRDESSKDDKPVKDIRKDNKAPPEKIEKK 228 LKG PV +SKVK E++ E+ + + ++K P+ +KK Sbjct: 455 LKGLPVVLSKVKVEVKKEAG-----INQPKTESKTEPKNGDKK 492 >ref|ZP_04579685.1| peptidase S41A [Oxalobacter formigenes OXCC13] gb|EEO30658.1| peptidase S41A [Oxalobacter formigenes OXCC13] Length = 473 Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 76/112 (67%), Positives = 94/112 (83%), Gaps = 3/112 (2%) Query: 88 LTTARYYTPNGRSIQARGIVPDIMVDEYADGDGLNGLRLREADLTKHLTNDKDKDAKEVK 147 LTTARYYTP+GRSIQA+GIVPD+MVDE A+GDG+NGLRLREADL+KHLTN D+ E Sbjct: 355 LTTARYYTPSGRSIQAKGIVPDLMVDETAEGDGINGLRLREADLSKHLTNGTDEVKNE-- 412 Query: 148 ASTVDEKEEERLIALEKKRKPLEFGSKEDFQLAQALNHLKGQPVQVSKVKPE 199 +++ EE +L+ KK KP+E+G+K+DFQL QALNHLKG+PVQ+SKVKPE Sbjct: 413 -DRLNQDEEIKLLESAKKYKPIEYGTKKDFQLMQALNHLKGKPVQLSKVKPE 463