BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0255.p (441 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004753463.1| acyl-CoA dehydrogenase [Collimonas fungivora... 518 e-145 ref|YP_003774405.1| acyl-CoA dehydrogenase [Herbaspirillum serop... 491 e-136 ref|YP_001099351.1| putative acyl-CoA dehydrogenase (flavoprotei... 490 e-136 ref|YP_001354021.1| acyl-CoA dehydrogenase [Janthinobacterium sp... 471 e-130 ref|YP_560810.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans... 465 e-129 >ref|YP_004753463.1| acyl-CoA dehydrogenase [Collimonas fungivorans Ter331] gb|AEK62640.1| Acyl-CoA dehydrogenase [Collimonas fungivorans Ter331] Length = 548 Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust. Identities = 254/331 (76%), Positives = 282/331 (85%), Gaps = 6/331 (1%) Query: 9 PMCDAHMVLARTDNGLSCFFVPRWRPDGHKNGVLVQRLKDKLGNRSNSSSEVEFEDAYGV 68 PMCDAHMVLART+ GLSCFFVPRWRPDG KN V +QRLKDKLGNRSNSSSEVEF +A+G+ Sbjct: 223 PMCDAHMVLARTEMGLSCFFVPRWRPDGSKNQVQIQRLKDKLGNRSNSSSEVEFREAFGI 282 Query: 69 MVGDEGRGIPTIIEMANHTRLDCVIGSAGLMRHALVQAIHHARHRSAFGKHLAEQALMRN 128 MVGDEGRGIPTIIEMANHTRLDCVIGSAGL+R ALVQA+HHARHRSAFG+HLAEQ LM+N Sbjct: 283 MVGDEGRGIPTIIEMANHTRLDCVIGSAGLIRQALVQALHHARHRSAFGRHLAEQPLMQN 342 Query: 129 VLADLALESEAATLLMLRLASAFEAPADPLQRAWRRIVTPAAKFWICKRALEFTGECMEV 188 VL+DLALESEAATLLML+LASAFE P DPLQRAWRRIVTPAAKFW+CKRALEF+GECME+ Sbjct: 343 VLSDLALESEAATLLMLQLASAFEHPDDPLQRAWRRIVTPAAKFWVCKRALEFSGECMEI 402 Query: 189 WGGNGYVETGPMARMYREAPVNSIWEGSGNVMCLDVLRAMEREPDACLLLLDELQQVADG 248 WGGNGYVETGPMAR YREAPVNSIWEGSGNVMCLDVLRA+EREP LLL +L + A Sbjct: 403 WGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAIEREPAGFGLLLAQLAETARD 462 Query: 249 HEVLQAPLHALKQMMTLAPEQREMLARRLVQQLVLAVQGALMLQHAPPAMAEAFVLSRGD 308 H L+A L L++ + EQREML RR VQ+LVL VQGALMLQHAP +A+AF+ SR + Sbjct: 463 HPGLRAMLDDLQKDLATPAEQREMLGRRFVQRLVLTVQGALMLQHAPSVIADAFIASRSE 522 Query: 309 AANGRVYGTLPAGTADAASLQKSILAR-WMS 338 A GRVYGTL AA LQ+ IL R W+ Sbjct: 523 AMGGRVYGTLA-----AAHLQQQILQRTWLQ 548 >ref|YP_003774405.1| acyl-CoA dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ62497.1| acyl-CoA dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 550 Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust. Identities = 249/327 (76%), Positives = 277/327 (84%), Gaps = 3/327 (0%) Query: 9 PMCDAHMVLARTDNGLSCFFVPRWRPDGHKNGVLVQRLKDKLGNRSNSSSEVEFEDAYGV 68 PMCDAH++LART+NGLSCFFVPRW PDG +N +L+QRLKDKLGNRSNSSSEVEFE+A G+ Sbjct: 222 PMCDAHLMLARTENGLSCFFVPRWLPDGTRNPILIQRLKDKLGNRSNSSSEVEFEEAMGI 281 Query: 69 MVGDEGRGIPTIIEMANHTRLDCVIGSAGLMRHALVQAIHHARHRSAFGKHLAEQALMRN 128 MVGDEGRGIPTIIEMANHTRLDC+IGSA LMR ALVQAIHHARHRSAFG+ LAEQ LMR Sbjct: 282 MVGDEGRGIPTIIEMANHTRLDCIIGSAALMRQALVQAIHHARHRSAFGRRLAEQPLMRA 341 Query: 129 VLADLALESEAATLLMLRLASAFEAPADPLQRAWRRIVTPAAKFWICKRALEFTGECMEV 188 VLADLALESEAAT+LMLR+A AF+AP DPLQRAW+RI+TPAAKFWICKR LEFTGECMEV Sbjct: 342 VLADLALESEAATMLMLRVAHAFDAPDDPLQRAWKRIITPAAKFWICKRTLEFTGECMEV 401 Query: 189 WGGNGYVETGPMARMYREAPVNSIWEGSGNVMCLDVLRAMEREPDACLLLLDELQQVADG 248 WGGNGYVET PMAR+YREAPVNSIWEGSGNVMCLDVLRAM RE LLL EL A G Sbjct: 402 WGGNGYVETAPMARLYREAPVNSIWEGSGNVMCLDVLRAMARETQGLALLLLELDDAAAG 461 Query: 249 HEVLQAPLHALKQMMTLAPEQREMLARRLVQQLVLAVQGALMLQHAPPAMAEAFVLSRGD 308 H L+ + ALKQM+ E+RE ARRLVQQLVLA+QG LML+HAP A+AF+ SR Sbjct: 462 HPALRQQVDALKQMLAAPEEEREAGARRLVQQLVLALQGMLMLRHAPAGSAQAFLESRSQ 521 Query: 309 AANGRVYGTLPAGTADAASLQKSILAR 335 A GRVYGTL G+A A+ Q++IL R Sbjct: 522 ADGGRVYGTL--GSASLAA-QEAILQR 545 >ref|YP_001099351.1| putative acyl-CoA dehydrogenase (flavoprotein), putative aidB protein [Herminiimonas arsenicoxydans] emb|CAL61224.1| isovaleryl CoA dehydrogenase [Herminiimonas arsenicoxydans] Length = 551 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 244/331 (73%), Positives = 278/331 (83%), Gaps = 9/331 (2%) Query: 9 PMCDAHMVLARTDNGLSCFFVPRWRPDGHKNGVLVQRLKDKLGNRSNSSSEVEFEDAYGV 68 PMCDAH+VLART+NGLSCFFVPRWRPDG +N VL+Q+LKDKLGNRSNSSSEVEF+DAYGV Sbjct: 222 PMCDAHLVLARTENGLSCFFVPRWRPDGSRNAVLIQQLKDKLGNRSNSSSEVEFQDAYGV 281 Query: 69 MVGDEGRGIPTIIEMANHTRLDCVIGSAGLMRHALVQAIHHARHRSAFGKHLAEQALMRN 128 MVG+EGRGIPTIIEMANHTRLDCVIGSAGLMR+ALVQAIHHARHRSAFG LAEQ LMRN Sbjct: 282 MVGEEGRGIPTIIEMANHTRLDCVIGSAGLMRNALVQAIHHARHRSAFGHPLAEQPLMRN 341 Query: 129 VLADLALESEAATLLMLRL----ASAFEAPADPLQRAWRRIVTPAAKFWICKRALEFTGE 184 VL+DLALESEAATLLMLRL ++ +AP D L+RAWRRI+TPAAKFW+CKR LEF+GE Sbjct: 342 VLSDLALESEAATLLMLRLARAADASRDAPDDLLERAWRRILTPAAKFWVCKRVLEFSGE 401 Query: 185 CMEVWGGNGYVETGPMARMYREAPVNSIWEGSGNVMCLDVLRAMEREPDACLLLLDELQQ 244 CMEVWGGNGY+E PMARM+REAPVNSIWEGSGNVMCLDVLRA+ERE + LLL LQ Sbjct: 402 CMEVWGGNGYIENAPMARMFREAPVNSIWEGSGNVMCLDVLRAIEREAEGFALLLQNLQD 461 Query: 245 VADGHEVLQAPLHALKQMMTLAPEQREMLARRLVQQLVLAVQGALMLQHAPPAMAEAFVL 304 A H L+A + +L + L P+Q+EM ARR Q+LVLA Q +LMLQHAP ++AEAF+ Sbjct: 462 SAGTHAGLRALIASLHNDLALPPQQQEMQARRFAQRLVLAAQASLMLQHAPASVAEAFIA 521 Query: 305 SRGDAANGRVYGTLPAGTADAASLQKSILAR 335 SR DA GRV+GTLP A +LQ +LAR Sbjct: 522 SRIDAECGRVFGTLP-----ATALQYDMLAR 547 >ref|YP_001354021.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR89320.1| acyl-CoA dehydrogenase [Janthinobacterium sp. Marseille] Length = 547 Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust. Identities = 239/323 (73%), Positives = 268/323 (82%) Query: 9 PMCDAHMVLARTDNGLSCFFVPRWRPDGHKNGVLVQRLKDKLGNRSNSSSEVEFEDAYGV 68 PMCDAH+VLART+ GLSCFFVPRWRPDG KN +L+QRLKDKLGNRSNSSSEVEF+DAYGV Sbjct: 222 PMCDAHLVLARTEAGLSCFFVPRWRPDGSKNAILIQRLKDKLGNRSNSSSEVEFQDAYGV 281 Query: 69 MVGDEGRGIPTIIEMANHTRLDCVIGSAGLMRHALVQAIHHARHRSAFGKHLAEQALMRN 128 MVG++GRGIPTIIEMANHTRLDCVIGS GLMR+ALVQAIHHARHR AFG LAEQALM+N Sbjct: 282 MVGEDGRGIPTIIEMANHTRLDCVIGSTGLMRNALVQAIHHARHRHAFGLPLAEQALMQN 341 Query: 129 VLADLALESEAATLLMLRLASAFEAPADPLQRAWRRIVTPAAKFWICKRALEFTGECMEV 188 VLADLALESEAAT LMLRLA A EA DP++RAWRR+VTPAAKFWICKRALEFTGECMEV Sbjct: 342 VLADLALESEAATRLMLRLAQAAEAIDDPVERAWRRVVTPAAKFWICKRALEFTGECMEV 401 Query: 189 WGGNGYVETGPMARMYREAPVNSIWEGSGNVMCLDVLRAMEREPDACLLLLDELQQVADG 248 WGGNGYVE PMARMYREAPVNSIWEGSGNVMCLDVLRA+ +E DA LLLD L +A Sbjct: 402 WGGNGYVENAPMARMYREAPVNSIWEGSGNVMCLDVLRAIAKEADAFKLLLDALLDIAKE 461 Query: 249 HEVLQAPLHALKQMMTLAPEQREMLARRLVQQLVLAVQGALMLQHAPPAMAEAFVLSRGD 308 + L+ + L+ + L Q+EM ARR Q+LVL Q LMLQ AP +A+AF+ SR D Sbjct: 462 DKGLRELIAELRTDLALPATQQEMQARRFTQRLVLVAQSCLMLQAAPANIADAFISSRLD 521 Query: 309 AANGRVYGTLPAGTADAASLQKS 331 A +GRVYGTL A A L+++ Sbjct: 522 AESGRVYGTLAAPLAAKEILERA 544 >ref|YP_560810.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] gb|ABE32758.1| Acyl-CoA dehydrogenase [Burkholderia xenovorans LB400] Length = 561 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 232/334 (69%), Positives = 262/334 (78%), Gaps = 10/334 (2%) Query: 9 PMCDAHMVLARTDN--GLSCFFVPRWRPDGHKNGVLVQRLKDKLGNRSNSSSEVEFEDAY 66 P CDAH+VL RTD+ GLSCFFVPR+ PDG KN V +QRLKDKLGNRSN+SSEVEF DA+ Sbjct: 226 PQCDAHLVLGRTDDHEGLSCFFVPRFAPDGSKNAVQIQRLKDKLGNRSNASSEVEFLDAF 285 Query: 67 GVMVGDEGRGIPTIIEMANHTRLDCVIGSAGLMRHALVQAIHHARHRSAFGKHLAEQALM 126 G+M+GDEGRG+PTIIEMAN+TRLDCVIGSA LMR ALVQAIHHARHRSAFG+HLA+Q LM Sbjct: 286 GIMIGDEGRGVPTIIEMANYTRLDCVIGSAALMRAALVQAIHHARHRSAFGRHLADQPLM 345 Query: 127 RNVLADLALESEAATLLMLRLASAFEAPADP-----LQRAWRRIVTPAAKFWICKRALEF 181 RNVLADLALESEAAT+L +RLA AFE AD +RAWRRIVTPAAK+W+CKRALEF Sbjct: 346 RNVLADLALESEAATVLFMRLARAFEESADAASTSLAERAWRRIVTPAAKYWVCKRALEF 405 Query: 182 TGECMEVWGGNGYVETGPMARMYREAPVNSIWEGSGNVMCLDVLRAMEREPDACLLLLDE 241 TGE MEVWGGNGYVETGPMAR YREAPVNSIWEGSGNVMCLDVLRAMEREPDA L Sbjct: 406 TGEAMEVWGGNGYVETGPMARFYREAPVNSIWEGSGNVMCLDVLRAMEREPDAARALFAA 465 Query: 242 LQQVADGHEVLQAPLHALKQMMTLAPEQREMLARRLVQQLVLAVQGALMLQHAPPAMAEA 301 Q+ A H L A L L E RE ARR+ QQ+VL Q L+L+HAP +AEA Sbjct: 466 WQREAQAHPALSAALGKLAAAFNGPAEHREASARRIAQQVVLIAQATLLLEHAPAEVAEA 525 Query: 302 FVLSR---GDAANGRVYGTLPAGTADAASLQKSI 332 F+ +R G +GRVYGTLPA AA ++++ Sbjct: 526 FIATRLADGCGESGRVYGTLPATFDHAAIVERAF 559