BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0246.p (155 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774410.1| hypothetical protein Hsero_0985 [Herbaspiril... 172 1e-41 ref|ZP_08176577.1| putative homoserine kinase type II (protein k... 168 2e-40 ref|YP_004752228.1| putative homoserine kinase type II, PnuC-ass... 167 7e-40 ref|ZP_02382524.1| aminoglycoside phosphotransferase [Burkholder... 166 2e-39 ref|YP_002908748.1| aminoglycoside phosphotransferase [Burkholde... 165 2e-39 >ref|YP_003774410.1| hypothetical protein Hsero_0985 [Herbaspirillum seropedicae SmR1] gb|ADJ62502.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 390 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 111/154 (72%), Positives = 126/154 (81%) Query: 1 LTPLWTHNDWHASNLLWTDRSAAAGVETILDFGLSDRTCALHDLATAIERNVIEWLAIQE 60 PLWTHNDWHASNLLW+D S A V+T+LDFGL DRT ALHDLATAIERN++EWLAI + Sbjct: 233 FVPLWTHNDWHASNLLWSDASPQAQVQTVLDFGLCDRTTALHDLATAIERNIVEWLAIPQ 292 Query: 61 GKTDAVHPDLLDALLDGYHLVLPLSSRQWRALAALLPLVHAEFALAELAYFHGITRSANN 120 VH DLLDALLDGY PLS+RQ RALAALLPLVHAEFALAEL YFHG+T+SA N Sbjct: 293 RDEQLVHLDLLDALLDGYAAQSPLSARQLRALAALLPLVHAEFALAELDYFHGVTQSAIN 352 Query: 121 AALAYDAYYLGHAAWFNSTAGRALLARITARAEA 154 A+LAYDAY+LGHAAWF+S G+ LLA + RA+A Sbjct: 353 ASLAYDAYFLGHAAWFHSAEGQRLLAHLHQRADA 386 >ref|ZP_08176577.1| putative homoserine kinase type II (protein kinase fold) [Xanthomonas vesicatoria ATCC 35937] gb|EGD11128.1| putative homoserine kinase type II (protein kinase fold) [Xanthomonas vesicatoria ATCC 35937] Length = 385 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 90/152 (59%), Positives = 102/152 (67%) Query: 1 LTPLWTHNDWHASNLLWTDRSAAAGVETILDFGLSDRTCALHDLATAIERNVIEWLAIQE 60 + PLWTH DWHASNLLW A V I DFGLSDR AL DLATAIERN+I WL + Sbjct: 230 MPPLWTHGDWHASNLLWETDHGATEVSAIFDFGLSDRCSALFDLATAIERNLIPWLQLDA 289 Query: 61 GKTDAVHPDLLDALLDGYHLVLPLSSRQWRALAALLPLVHAEFALAELAYFHGITRSANN 120 G LDALLDGY L PLS+ Q R LAALLP+VHA+FAL+E+ YF IT S +N Sbjct: 290 GARAQAQLQQLDALLDGYALHRPLSATQLRCLAALLPIVHADFALSEIEYFAAITHSPDN 349 Query: 121 AALAYDAYYLGHAAWFNSTAGRALLARITARA 152 +AY Y LGHA WF S G+ALLA + ARA Sbjct: 350 VDIAYHRYLLGHADWFASADGQALLAHLHARA 381 >ref|YP_004752228.1| putative homoserine kinase type II, PnuC-associated, THI-regulated branch [Collimonas fungivorans Ter331] gb|AEK61405.1| Putative homoserine kinase type II, PnuC-associated, THI-regulated branch [Collimonas fungivorans Ter331] Length = 403 Score = 167 bits (422), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 94/157 (59%), Positives = 111/157 (70%), Gaps = 5/157 (3%) Query: 1 LTPLWTHNDWHASNLLWTDRSAAAGVETILDFGLSDRTCALHDLATAIERNVIEWLAIQE 60 L PLWTHNDWHASNLLW + A V T++DFGL+DRTCA++DLA AIERN+IEWL + Sbjct: 240 LAPLWTHNDWHASNLLWQAQEPPA-VATVVDFGLADRTCAIYDLAIAIERNMIEWLVLPS 298 Query: 61 GKTDA----VHPDLLDALLDGYHLVLPLSSRQWRALAALLPLVHAEFALAELAYFHGITR 116 A VH LDA+LD Y V PLS + AL ALLPL H EFAL+ELAYFHG+ + Sbjct: 299 TPPAAQRPLVHIGQLDAMLDAYEAVRPLSVLEAAALPALLPLAHVEFALSELAYFHGVQK 358 Query: 117 SANNAALAYDAYYLGHAAWFNSTAGRALLARITARAE 153 SA N+ALAYD Y+LGHA WF S AGR LL + R + Sbjct: 359 SAENSALAYDTYFLGHAEWFGSDAGRYLLDHLQRRCD 395 >ref|ZP_02382524.1| aminoglycoside phosphotransferase [Burkholderia ubonensis Bu] Length = 408 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 82/145 (56%), Positives = 99/145 (68%), Gaps = 2/145 (1%) Query: 1 LTPLWTHNDWHASNLLWTDRSAAAGVETILDFGLSDRTCALHDLATAIERNVIEWLAIQE 60 L PLWTH DWHASNLLW+D A V T+LDFGLSDRTCA++D+A AIERN I+W+A + Sbjct: 252 LQPLWTHGDWHASNLLWSDGEPGAQVRTVLDFGLSDRTCAVYDVALAIERNAIDWMAPAD 311 Query: 61 GKTDAVHPDLLDALLDGYHLVLPLSSRQWRALAALLPLVHAEFALAELAYFHGITRSANN 120 + V +DALLDGY + PL + AL ALLP+VH EFAL+E+AYF GI S Sbjct: 312 ARK--VEYAQIDALLDGYESLAPLDDDAYAALVALLPIVHTEFALSEVAYFDGIVGSPET 369 Query: 121 AALAYDAYYLGHAAWFNSTAGRALL 145 +AYD Y +GHA WF GR LL Sbjct: 370 VDVAYDGYLIGHARWFGGRDGRQLL 394 >ref|YP_002908748.1| aminoglycoside phosphotransferase [Burkholderia glumae BGR1] gb|ACR31513.1| Aminoglycoside phosphotransferase [Burkholderia glumae BGR1] Length = 408 Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 85/151 (56%), Positives = 104/151 (68%), Gaps = 2/151 (1%) Query: 1 LTPLWTHNDWHASNLLWTDRSAAAGVETILDFGLSDRTCALHDLATAIERNVIEWLAIQE 60 L PLWTH DWHASNLLWT A A V T+LDFGL+DR+CA+ D+ATAIERN+++WLA Sbjct: 256 LAPLWTHGDWHASNLLWTSGEAGAQVATVLDFGLADRSCAVLDIATAIERNMVDWLAPAG 315 Query: 61 GKTDAVHPDLLDALLDGYHLVLPLSSRQWRALAALLPLVHAEFALAELAYFHGITRSANN 120 + + + L ALLDGY +LPLS +RALAALLP+ H EFAL+E+ YF+GI S Sbjct: 316 ARR--IEFEHLSALLDGYESILPLSGDAYRALAALLPIAHTEFALSEVEYFNGILSSPAG 373 Query: 121 AALAYDAYYLGHAAWFNSTAGRALLARITAR 151 AYD Y +GHA WF G+ LL I AR Sbjct: 374 TEAAYDTYLVGHAQWFAGADGQRLLDAIRAR 404