BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0245.p (235 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774410.1| hypothetical protein Hsero_0985 [Herbaspiril... 234 7e-60 ref|YP_004752228.1| putative homoserine kinase type II, PnuC-ass... 178 5e-43 ref|YP_001584996.1| aminoglycoside phosphotransferase [Burkholde... 167 1e-39 ref|YP_001116548.1| aminoglycoside phosphotransferase [Burkholde... 164 1e-38 ref|ZP_03570295.1| aminoglycoside phosphotransferase [Burkholder... 163 2e-38 >ref|YP_003774410.1| hypothetical protein Hsero_0985 [Herbaspirillum seropedicae SmR1] gb|ADJ62502.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 390 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 117/172 (68%), Positives = 131/172 (76%) Query: 1 MEAASHHLTRVLSHGMNADAVISDWPALTSAEVARVLLHYPQAGVPKRLVWHSPRPFSAG 60 M+AASHHLTRV+SHGM AD VISDWPALTSAEVARVL HYP G P RL WHSPRPFSA Sbjct: 1 MDAASHHLTRVISHGMGADPVISDWPALTSAEVARVLRHYPGVGQPLRLEWHSPRPFSAA 60 Query: 61 CVMTTSTMDVFVKRHHVSVRDVAGLSEEHGFINHLRSRGIAVSEVLTTADGATAFTDDHW 120 CVM T + + VKRHHV VRDVA L EEH F HL+ +G+ VS L TA GATA DD+W Sbjct: 61 CVMQTESGPIIVKRHHVRVRDVAALGEEHRFAAHLQEKGLPVSCALATASGATALADDYW 120 Query: 121 TYEVHGVASGVDLYRDAVSWTPFSSSVHAHEAGKALARLHLAAQDYAAPAXA 172 TYEV +A+GVDLYR+A+SWTPF S HA AG+ L+RLH AA Y APA A Sbjct: 121 TYEVFALAAGVDLYREALSWTPFHSCAHAWSAGQMLSRLHQAAAGYEAPARA 172 >ref|YP_004752228.1| putative homoserine kinase type II, PnuC-associated, THI-regulated branch [Collimonas fungivorans Ter331] gb|AEK61405.1| Putative homoserine kinase type II, PnuC-associated, THI-regulated branch [Collimonas fungivorans Ter331] Length = 403 Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 97/160 (60%), Positives = 111/160 (69%) Query: 11 VLSHGMNADAVISDWPALTSAEVARVLLHYPQAGVPKRLVWHSPRPFSAGCVMTTSTMDV 70 VLSHGM D V S WPALT EVAR+L HYPQAG RL WHSPRPFS+ CV T + + Sbjct: 15 VLSHGMGFDVVASSWPALTLDEVARLLRHYPQAGAVTRLGWHSPRPFSSACVADTGSGPL 74 Query: 71 FVKRHHVSVRDVAGLSEEHGFINHLRSRGIAVSEVLTTADGATAFTDDHWTYEVHGVASG 130 F+KR +R V L++EH F+ HLR RG+AVSEVL DG+TA D WTYEV V G Sbjct: 75 FIKRLLREIRTVDELTDEHRFMAHLRQRGLAVSEVLQAGDGSTAHADGGWTYEVQRVGQG 134 Query: 131 VDLYRDAVSWTPFSSSVHAHEAGKALARLHLAAQDYAAPA 170 VD YRDA SWTPF S+ A AG ALA+LHLAA+ Y APA Sbjct: 135 VDRYRDATSWTPFVSTEDAAAAGSALAKLHLAARGYDAPA 174 >ref|YP_001584996.1| aminoglycoside phosphotransferase [Burkholderia multivorans ATCC 17616] ref|YP_001947890.1| putative aminoglycoside phosphotransferase [Burkholderia multivorans ATCC 17616] gb|ABX18704.1| aminoglycoside phosphotransferase [Burkholderia multivorans ATCC 17616] dbj|BAG45354.1| putative aminoglycoside phosphotransferase [Burkholderia multivorans ATCC 17616] Length = 396 Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 90/157 (57%), Positives = 104/157 (66%), Gaps = 1/157 (0%) Query: 15 GMNADAVISDWPALTSAEVARVLLHYPQAGVPKRLVWHSPRPFSAGC-VMTTSTMDVFVK 73 G++ + DWP +T EVA VL AGVP RL WHSPRPFSA V T +FVK Sbjct: 21 GVDGEQAERDWPLITHDEVAAVLARIDGAGVPARLTWHSPRPFSAAVLVRTEDERALFVK 80 Query: 74 RHHVSVRDVAGLSEEHGFINHLRSRGIAVSEVLTTADGATAFTDDHWTYEVHGVASGVDL 133 RHH S+RDV GL+EEH FI HLR+ G V EVLT DGATAF WTYEVH VA GVD Sbjct: 81 RHHASLRDVEGLAEEHRFIAHLRAHGCPVPEVLTGRDGATAFAFGDWTYEVHVVAPGVDA 140 Query: 134 YRDAVSWTPFSSSVHAHEAGKALARLHLAAQDYAAPA 170 YR +SW PF+ HA+ AG+ALA+LH A+ Y APA Sbjct: 141 YRGVMSWKPFAHPSHAYAAGRALAQLHRASAGYDAPA 177 >ref|YP_001116548.1| aminoglycoside phosphotransferase [Burkholderia vietnamiensis G4] gb|ABO57083.1| aminoglycoside phosphotransferase [Burkholderia vietnamiensis G4] Length = 397 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 85/157 (54%), Positives = 105/157 (66%), Gaps = 1/157 (0%) Query: 15 GMNADAVISDWPALTSAEVARVLLHYPQAGVPKRLVWHSPRPFSAGCVM-TTSTMDVFVK 73 G++ + DWP +T EVA VL AG P RL WHSPRPFSA ++ TT +FVK Sbjct: 27 GVDGEQAERDWPLMTLDEVAGVLARIDGAGAPARLAWHSPRPFSAAVLVHTTRERALFVK 86 Query: 74 RHHVSVRDVAGLSEEHGFINHLRSRGIAVSEVLTTADGATAFTDDHWTYEVHGVASGVDL 133 RHH S+RDVA L+EEH FI HLR+ G+ V++VL DGA+AF WTYEVH +A GVD Sbjct: 87 RHHASLRDVAALAEEHRFIAHLRAHGVPVADVLAARDGASAFASGEWTYEVHALAPGVDA 146 Query: 134 YRDAVSWTPFSSSVHAHEAGKALARLHLAAQDYAAPA 170 YR +SW PF+ HA+ AG+ALA LH A+ Y APA Sbjct: 147 YRGVMSWKPFAHPSHAYAAGRALAELHRASAGYDAPA 183 >ref|ZP_03570295.1| aminoglycoside phosphotransferase [Burkholderia multivorans CGD2M] ref|ZP_03576938.1| aminoglycoside phosphotransferase [Burkholderia multivorans CGD2] gb|EEE08515.1| aminoglycoside phosphotransferase [Burkholderia multivorans CGD2] gb|EEE16202.1| aminoglycoside phosphotransferase [Burkholderia multivorans CGD2M] Length = 391 Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 88/157 (56%), Positives = 103/157 (65%), Gaps = 1/157 (0%) Query: 15 GMNADAVISDWPALTSAEVARVLLHYPQAGVPKRLVWHSPRPFSAGC-VMTTSTMDVFVK 73 G++ + DWP +T EVA VL AGVP RL WHSPRPFSA V T +FVK Sbjct: 21 GVDGEQAERDWPLITHDEVAAVLARIDGAGVPARLTWHSPRPFSAAVLVRTDDERALFVK 80 Query: 74 RHHVSVRDVAGLSEEHGFINHLRSRGIAVSEVLTTADGATAFTDDHWTYEVHGVASGVDL 133 RHH S+RDV GL+EEH FI HLR+ G V +VL DGATAF WTYEVH VA GVD Sbjct: 81 RHHASLRDVEGLAEEHRFIAHLRAHGCPVPDVLAGRDGATAFALGDWTYEVHVVAPGVDA 140 Query: 134 YRDAVSWTPFSSSVHAHEAGKALARLHLAAQDYAAPA 170 YR +SW PF+ HA+ AG+ALA+LH A+ Y APA Sbjct: 141 YRGVMSWKPFAHPSHAYAAGRALAQLHRASAGYDAPA 177