BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0243.p (494 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774412.1| membrane-bound lytic peptidoglycan transglyc... 501 e-140 ref|YP_004754383.1| membrane-bound lytic murein transglycosylase... 491 e-136 ref|YP_001354349.1| membrane-bound lytic murein transglycosylase... 471 e-130 ref|YP_001100807.1| membrane-bound lytic murein transglycosylase... 464 e-128 ref|ZP_04579718.1| membrane-bound lytic Murein transglycosylase ... 369 e-100 >ref|YP_003774412.1| membrane-bound lytic peptidoglycan transglycosylase B protein [Herbaspirillum seropedicae SmR1] gb|ADJ62504.1| membrane-bound lytic peptidoglycan transglycosylase B protein [Herbaspirillum seropedicae SmR1] Length = 369 Score = 501 bits (1291), Expect = e-140, Method: Compositional matrix adjust. Identities = 251/372 (67%), Positives = 291/372 (78%), Gaps = 12/372 (3%) Query: 1 LLRLLGLSALSLACLIPAAVHAESTTRKNQTDKSKSSNTKAKNARQAKPKKKAAPADDGE 60 LL +LGL A + A A A S K Q K+ AK KK +P D GE Sbjct: 4 LLLVLGLCASASALCADNA--AASKAGKAQQHKTGPKKVVAK--------KKTSPEDQGE 53 Query: 61 FANFSQWKEVNDFIDDMVARNGFDKAALQALFNKARYIDTAIQLIKPAPSGKPKNWQAYR 120 F NF++WKEV F+DDMV RN F ++ L +LF + RY+D+AIQLIKPAPS KPKNW AYR Sbjct: 54 FVNFNEWKEVARFMDDMVERNHFSRSELNSLFAQTRYLDSAIQLIKPAPSNKPKNWFAYR 113 Query: 121 ARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAEIIVGIIGVETVYGRNTGNFRVLDAI 180 ARFVEP RINAGVDFWN + +AL+RAEAQYGVP EII GIIGVETVYGRNTGNFRV+DAI Sbjct: 114 ARFVEPVRINAGVDFWNTYGVALARAEAQYGVPMEIIAGIIGVETVYGRNTGNFRVMDAI 173 Query: 181 TTLAFDYPKTANRDARMAFFRGELENTLLFARESNIDPFSLLGSYAGAIGWPQFMPSSIR 240 +TLAFDYP T NR+ARMAFFRGELENTLL ARE+ IDP +L GSYAGAIGWPQFMP SIR Sbjct: 174 STLAFDYPNTPNREARMAFFRGELENTLLLAREAGIDPLTLRGSYAGAIGWPQFMPGSIR 233 Query: 241 QYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQRGEPTVFPATV-TDAGKIDNLINQG 299 +YAVDFDG+GKIDLR+SPVDAIGSVA++L +HGWQRG+P FP TV T+ + + ++NQG Sbjct: 234 EYAVDFDGDGKIDLRNSPVDAIGSVAHYLAVHGWQRGQPVAFPVTVSTENRQWEGMLNQG 293 Query: 300 LEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQNGDAPTDHWLATNNFFAITQYNRSYFY 359 LEAK+S DELRAAGVV + +PA LRFGLVDLQNG PT++W+ T NFFAITQYNRSYFY Sbjct: 294 LEAKYSVDELRAAGVVLPA-VPADLRFGLVDLQNGTNPTEYWIGTANFFAITQYNRSYFY 352 Query: 360 AMSVIDLARGHA 371 AMSV +L R A Sbjct: 353 AMSVAELGRAVA 364 >ref|YP_004754383.1| membrane-bound lytic murein transglycosylase B [Collimonas fungivorans Ter331] gb|AEK63560.1| membrane-bound lytic murein transglycosylase B [Collimonas fungivorans Ter331] Length = 374 Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust. Identities = 237/335 (70%), Positives = 271/335 (80%), Gaps = 5/335 (1%) Query: 38 NTKAKNARQAKPKKKAAPADDGEFANFSQWKEVNDFIDDMVARNGFDKAALQALFNKARY 97 N K A AK +K ++ ADDGEFANF+ WKEV+ FID MV +NGFD+ L A+FNK RY Sbjct: 33 NNPGKTA-SAKIRKASSTADDGEFANFADWKEVSSFIDQMVEKNGFDRNELVAMFNKVRY 91 Query: 98 IDTAIQLIKPAPSGKPKNWQAYRARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAEII 157 +DTAIQL+KPAP+ KPKNW AYRARFVEP RI AGVDFWN + AL RAEAQYGVPAEII Sbjct: 92 VDTAIQLMKPAPASKPKNWAAYRARFVEPVRIQAGVDFWNTYADALGRAEAQYGVPAEII 151 Query: 158 VGIIGVETVYGRNTGNFRVLDAITTLAFDYPKTANRDARMAFFRGELENTLLFARESNID 217 VGIIGVETVYGRN G+FRV+DAITTLAFDYP T R+ARM FFR ELE+TLL+ARES ID Sbjct: 152 VGIIGVETVYGRNVGSFRVMDAITTLAFDYPNTPTREARMTFFRSELESTLLYARESGID 211 Query: 218 PFSLLGSYAGAIGWPQFMPSSIRQYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQRG 277 PF+LLGSYAGAIGWPQFMPSSIRQY VDFDG GKIDLR+SPVDAIGSVA++L HGW+ G Sbjct: 212 PFTLLGSYAGAIGWPQFMPSSIRQYGVDFDGKGKIDLRNSPVDAIGSVAHYLAEHGWKTG 271 Query: 278 EPTVFPATVTDAGKIDN----LINQGLEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQN 333 P VFPAT++ +N I QGLEA+F DEL AAGVV G P +R+GL+DLQN Sbjct: 272 LPIVFPATLSTDTSAENRWQAFIGQGLEARFPLDELIAAGVVPGVVPPNDIRYGLIDLQN 331 Query: 334 GDAPTDHWLATNNFFAITQYNRSYFYAMSVIDLAR 368 G P ++WL T+NFFAITQYNRS+FYAMSV+DL R Sbjct: 332 GQNPAEYWLGTDNFFAITQYNRSFFYAMSVVDLGR 366 >ref|YP_001354349.1| membrane-bound lytic murein transglycosylase B protein [Janthinobacterium sp. Marseille] gb|ABR88258.1| membrane-bound lytic murein transglycosylase B protein [Janthinobacterium sp. Marseille] Length = 372 Score = 471 bits (1213), Expect = e-130, Method: Compositional matrix adjust. Identities = 224/309 (72%), Positives = 254/309 (82%) Query: 60 EFANFSQWKEVNDFIDDMVARNGFDKAALQALFNKARYIDTAIQLIKPAPSGKPKNWQAY 119 EFANFSQW +V+ FID MV +NGF+K LQ+ N+ Y+D+AIQL+KPAP GKPKNW AY Sbjct: 56 EFANFSQWSDVSSFIDQMVEKNGFNKQQLQSTLNQTHYVDSAIQLMKPAPPGKPKNWAAY 115 Query: 120 RARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAEIIVGIIGVETVYGRNTGNFRVLDA 179 RARFVEP RIN GV FWN++ AL+RAEA+YGVPAEIIV IIGVETVYGRNTGNFRV+DA Sbjct: 116 RARFVEPVRINGGVAFWNQYADALARAEAKYGVPAEIIVAIIGVETVYGRNTGNFRVMDA 175 Query: 180 ITTLAFDYPKTANRDARMAFFRGELENTLLFARESNIDPFSLLGSYAGAIGWPQFMPSSI 239 ITTLAF YP T NR ARM +FRGELENTLLFAR+ IDPFSLLGSYAGAIGWPQFMP SI Sbjct: 176 ITTLAFAYPDTPNRTARMNYFRGELENTLLFARDEQIDPFSLLGSYAGAIGWPQFMPGSI 235 Query: 240 RQYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQRGEPTVFPATVTDAGKIDNLINQG 299 R++AVDFDGNG IDLR+SPVDAIGSVANFL HGW+ GEPTVFPA V INQG Sbjct: 236 RKFAVDFDGNGHIDLRNSPVDAIGSVANFLVQHGWRSGEPTVFPAKVDMTENWQRFINQG 295 Query: 300 LEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQNGDAPTDHWLATNNFFAITQYNRSYFY 359 L AKF+ E++ AGV E PA + FGLVDLQNG P+++WL +NFFAITQYNRS+FY Sbjct: 296 LSAKFTLKEMKEAGVTPLVEPPADMLFGLVDLQNGADPSEYWLGADNFFAITQYNRSFFY 355 Query: 360 AMSVIDLAR 368 AMSVIDL+R Sbjct: 356 AMSVIDLSR 364 >ref|YP_001100807.1| membrane-bound lytic murein transglycosylase B [Herminiimonas arsenicoxydans] emb|CAL62686.1| membrane-bound lytic murein transglycosylase B [Herminiimonas arsenicoxydans] Length = 367 Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/309 (72%), Positives = 250/309 (80%) Query: 60 EFANFSQWKEVNDFIDDMVARNGFDKAALQALFNKARYIDTAIQLIKPAPSGKPKNWQAY 119 EFANF+QW++V DFID M +NGFDK LQ +K Y+D+AIQL+KPAP GKPKNW AY Sbjct: 51 EFANFNQWRDVADFIDRMAEKNGFDKKELQNTLSKTHYVDSAIQLMKPAPPGKPKNWAAY 110 Query: 120 RARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAEIIVGIIGVETVYGRNTGNFRVLDA 179 R+RFVEP RI+AGV FWN + AL+RAE YGVPAEIIV IIGVETVYGRNTGNFRV+DA Sbjct: 111 RSRFVEPVRIDAGVAFWNTYADALTRAEKLYGVPAEIIVAIIGVETVYGRNTGNFRVMDA 170 Query: 180 ITTLAFDYPKTANRDARMAFFRGELENTLLFARESNIDPFSLLGSYAGAIGWPQFMPSSI 239 ITTLAF YP T NR RMA+FRGELENTLLFAR+ IDPFSLLGSYAGAIGWPQFMP SI Sbjct: 171 ITTLAFAYPDTPNRSTRMAYFRGELENTLLFARDEKIDPFSLLGSYAGAIGWPQFMPGSI 230 Query: 240 RQYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQRGEPTVFPATVTDAGKIDNLINQG 299 R++AVDFDGNG IDLR+SPVDAIGSVANFL HGW+ GEP VFPATV I QG Sbjct: 231 RKFAVDFDGNGHIDLRNSPVDAIGSVANFLVQHGWRTGEPAVFPATVDMTENWQRFIGQG 290 Query: 300 LEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQNGDAPTDHWLATNNFFAITQYNRSYFY 359 LEAKFS EL+AAGV E P+ + FGLVDLQNG +++WL NFFAITQYNRS+FY Sbjct: 291 LEAKFSVAELKAAGVTPTIEPPSDMLFGLVDLQNGAEASEYWLGAPNFFAITQYNRSFFY 350 Query: 360 AMSVIDLAR 368 AMSVIDL+R Sbjct: 351 AMSVIDLSR 359 >ref|ZP_04579718.1| membrane-bound lytic Murein transglycosylase B [Oxalobacter formigenes OXCC13] gb|EEO30691.1| membrane-bound lytic Murein transglycosylase B [Oxalobacter formigenes OXCC13] Length = 376 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 186/334 (55%), Positives = 231/334 (69%), Gaps = 7/334 (2%) Query: 42 KNARQAKPKKKAAP-----ADDGEFA-NFSQWKEVNDFIDDMVARNGFDKAALQALFNKA 95 KN Q + ++P + GE A F+ + DFID + DK L LF Sbjct: 31 KNTSQPESTCSSSPNMPGSVESGEAAIPFTIEPPLADFIDRFSTKYHVDKNRLNCLFQGT 90 Query: 96 RYIDTAIQLIKPAPSGKPKNWQAYRARFVEPKRINAGVDFWNEHELALSRAEAQYGVPAE 155 R TAI+L+KP+ SGK KNWQAYR R +EP R+NAGV FWN +E L RAE +YGVPA Sbjct: 91 RVNHTAIRLMKPSGSGKTKNWQAYRQRMIEPVRVNAGVRFWNTYEKYLDRAEKEYGVPAY 150 Query: 156 IIVGIIGVETVYGRNTGNFRVLDAITTLAFDYPKTANRDARMAFFRGELENTLLFARESN 215 IIVGI+G+ET+YGR+TG FR LDA+TTLAF YP+T N+ +R FFR ELE LL + ++ Sbjct: 151 IIVGILGIETIYGRDTGRFRTLDALTTLAFYYPETPNKASRQEFFRKELEQFLLLSSQNQ 210 Query: 216 IDPFSLLGSYAGAIGWPQFMPSSIRQYAVDFDGNGKIDLRSSPVDAIGSVANFLKIHGWQ 275 +DP S+ GSYAGAIGWPQFMP SIR YAVDFD +GKIDL +S +DAIGSVANFLK HGW+ Sbjct: 211 VDPLSIYGSYAGAIGWPQFMPGSIRAYAVDFDKDGKIDLENSAIDAIGSVANFLKQHGWK 270 Query: 276 RGEPTVFPATV-TDAGKIDNLINQGLEAKFSPDELRAAGVVSGSELPAGLRFGLVDLQNG 334 G+P +FPAT D + L NQGL+A +S EL A + + P L +GLVDL NG Sbjct: 271 TGKPVIFPATADVDCPLPETLFNQGLKATYSLKELNAQCISTDPLAPDNLLYGLVDLPNG 330 Query: 335 DAPTDHWLATNNFFAITQYNRSYFYAMSVIDLAR 368 PT++ + T+NFFAITQYNRSYFYAMSVI+L + Sbjct: 331 PYPTEYRIGTDNFFAITQYNRSYFYAMSVIELGK 364