BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0242.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754378.1| acetylspermidine deacetylase [Collimonas fun... 413 e-113 ref|YP_004028387.1| acetylspermidine deacetylase [Burkholderia r... 407 e-112 ref|YP_004359612.1| Histone deacetylase family protein [Burkhold... 405 e-111 ref|YP_001155294.1| histone deacetylase superfamily protein [Pol... 402 e-110 ref|YP_109100.1| putative histone deacetylase-family protein [Bu... 402 e-110 >ref|YP_004754378.1| acetylspermidine deacetylase [Collimonas fungivorans Ter331] gb|AEK63555.1| Acetylspermidine deacetylase [Collimonas fungivorans Ter331] Length = 340 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 216/313 (69%), Positives = 258/313 (82%), Gaps = 1/313 (0%) Query: 1 MTTAFYTHADCQRHEMGDWHPETPLRLQAIEDQLITSRIDQFLERRDAPLADVADIERVH 60 +TTAFYTH DC+ H+MG HPE+P RLQAIEDQLI SRIDQ L+ R PLA D+ R H Sbjct: 29 VTTAFYTHPDCKLHDMGPGHPESPARLQAIEDQLIASRIDQLLDYRSPPLAQEVDLVRAH 88 Query: 61 TANAVALIRDNAAALAQDNLAHYPLDGDTSINRYSWNAALRAAGAAVAATDAVIAGELEN 120 +A +AL+R+++ ALA YPLD DTS+N +SW AALRAAGAA+AATDAV+AGE+ N Sbjct: 89 SAAMIALVREHSLALA-GKAGLYPLDPDTSVNGHSWQAALRAAGAALAATDAVMAGEVSN 147 Query: 121 AFCSVRPPGHHATPTTPMGFCLFNNVAIAARHAIDVHGLERVAIVDFDVHHGNGTEAAFK 180 AFC+VRPPGHHAT MGFCLFNN+A+AA HA++ HGLERVAI+DFDVHHGNGTE F Sbjct: 148 AFCAVRPPGHHATSYNSMGFCLFNNIALAALHALEAHGLERVAIIDFDVHHGNGTEEIFA 207 Query: 181 HDPRVLMVSFFQHPFYPFSGADPSEPHILNEPLPAYTAGNVVRQLVTDKWLPALHAHQPQ 240 DPRVLM SFFQHPFYP G +P + +N P+PAY+ G++VR+L T++WLPAL+AH+PQ Sbjct: 208 RDPRVLMASFFQHPFYPHCGTEPEGDNAVNIPVPAYSDGSIVRKLATEQWLPALNAHRPQ 267 Query: 241 MIFISAGFDAHREDDMGQMALVEADYAWMTKQIMDVARQHARGRIVSCLEGGYNLSALGR 300 MIF+SAGFDAHREDDM QM LVEADY W+T+QIM+VA +HA GRIVSCLEGGYNLSALGR Sbjct: 268 MIFVSAGFDAHREDDMAQMGLVEADYTWLTRQIMEVAAEHAEGRIVSCLEGGYNLSALGR 327 Query: 301 SVVAHLKVLADLD 313 S VAHLKVLA+L+ Sbjct: 328 SAVAHLKVLAELE 340 >ref|YP_004028387.1| acetylspermidine deacetylase [Burkholderia rhizoxinica HKI 454] emb|CBW74243.1| Acetylspermidine deacetylase (EC 3.5.1.48) [Burkholderia rhizoxinica HKI 454] Length = 369 Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/312 (64%), Positives = 236/312 (75%), Gaps = 5/312 (1%) Query: 1 MTTAFYTHADCQRHEMGDWHPETPLRLQAIEDQLITSRIDQFLERRDAPLADVADIERVH 60 M T F+TH +C+ HEMG HPE P RL AIEDQLI + ID ++ APLAD A + RVH Sbjct: 63 MATGFFTHPECRLHEMGQGHPECPARLSAIEDQLIANGIDPLIQHELAPLADEASLARVH 122 Query: 61 TANAVALIRDNAAALAQDNLAHYPLDGDTSINRYSWNAALRAAGAAVAATDAVIAGELEN 120 T + +RD A + +D DT +N +SW AALR+AGA+VAATDAV+AG +N Sbjct: 123 TRAHIDFVRDTAP-----EQGYAEIDADTQMNPHSWRAALRSAGASVAATDAVMAGRYDN 177 Query: 121 AFCSVRPPGHHATPTTPMGFCLFNNVAIAARHAIDVHGLERVAIVDFDVHHGNGTEAAFK 180 AFCSVRPPGHHA P MGFC FNNVAIAARHA+DVHGL RVAI+DFDVHHGNGTEA F Sbjct: 178 AFCSVRPPGHHAEPARAMGFCFFNNVAIAARHALDVHGLARVAIIDFDVHHGNGTEAVFA 237 Query: 181 HDPRVLMVSFFQHPFYPFSGADPSEPHILNEPLPAYTAGNVVRQLVTDKWLPALHAHQPQ 240 D RVLM SFFQHPFYPFSG D P+++N PLPA T G VR+ + WLP L A +PQ Sbjct: 238 GDERVLMCSFFQHPFYPFSGFDNQAPNMVNLPLPARTRGMEVREAIDLIWLPRLDAFRPQ 297 Query: 241 MIFISAGFDAHREDDMGQMALVEADYAWMTKQIMDVARQHARGRIVSCLEGGYNLSALGR 300 MIF+SAGFDAHRED++G M LVE DYAW+T+Q+ DVA ++A GRIVSCLEGGY+LSALGR Sbjct: 298 MIFVSAGFDAHREDELGNMGLVEDDYAWITRQVRDVAVRYAHGRIVSCLEGGYSLSALGR 357 Query: 301 SVVAHLKVLADL 312 SVVAHLK LA+L Sbjct: 358 SVVAHLKALANL 369 >ref|YP_004359612.1| Histone deacetylase family protein [Burkholderia gladioli BSR3] gb|AEA59656.1| Histone deacetylase family protein [Burkholderia gladioli BSR3] Length = 307 Score = 405 bits (1042), Expect = e-111, Method: Compositional matrix adjust. Identities = 206/312 (66%), Positives = 245/312 (78%), Gaps = 5/312 (1%) Query: 1 MTTAFYTHADCQRHEMGDWHPETPLRLQAIEDQLITSRIDQFLERRDAPLADVADIERVH 60 M TAFYTH DC HEMG+WHPE P RL AI+DQLI SRID+ +E AP A A + RVH Sbjct: 1 MATAFYTHPDCLLHEMGEWHPECPSRLSAIQDQLIASRIDELIEHESAPFASEAALARVH 60 Query: 61 TANAVALIRDNAAALAQDNLAHYPLDGDTSINRYSWNAALRAAGAAVAATDAVIAGELEN 120 T + I+ N A + LD DTS+NR++W AALRAAGAA+AATDAV+ G +N Sbjct: 61 TRAHIDYIKSNVPAEG-----YCELDPDTSMNRHTWQAALRAAGAAIAATDAVLEGRYDN 115 Query: 121 AFCSVRPPGHHATPTTPMGFCLFNNVAIAARHAIDVHGLERVAIVDFDVHHGNGTEAAFK 180 AFCSVRPPGHHA P MGFC FNNVAIAARHA+DVHGLERVA++DFDVHHGNGTEAAF Sbjct: 116 AFCSVRPPGHHAEPARAMGFCFFNNVAIAARHALDVHGLERVAVIDFDVHHGNGTEAAFS 175 Query: 181 HDPRVLMVSFFQHPFYPFSGADPSEPHILNEPLPAYTAGNVVRQLVTDKWLPALHAHQPQ 240 +DPRVLM SFFQHP +PFSG + P++LN P+PA T+G +R+ V WLP L A +PQ Sbjct: 176 NDPRVLMCSFFQHPLFPFSGTEHPAPNMLNVPVPARTSGMAIRETVDMLWLPRLEAFRPQ 235 Query: 241 MIFISAGFDAHREDDMGQMALVEADYAWMTKQIMDVARQHARGRIVSCLEGGYNLSALGR 300 M+F+SAGFDAHREDD+G+M LVEADY W+T QI ++AR+HA+GR+VSCLEGGYNLSALGR Sbjct: 236 MLFVSAGFDAHREDDLGRMGLVEADYEWLTTQICEIARKHAQGRVVSCLEGGYNLSALGR 295 Query: 301 SVVAHLKVLADL 312 SVVAHL+VLA + Sbjct: 296 SVVAHLRVLAGV 307 >ref|YP_001155294.1| histone deacetylase superfamily protein [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gb|ABP33730.1| histone deacetylase superfamily [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 306 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 191/312 (61%), Positives = 244/312 (78%), Gaps = 6/312 (1%) Query: 1 MTTAFYTHADCQRHEMGDWHPETPLRLQAIEDQLITSRIDQFLERRDAPLADVADIERVH 60 MTT + TH D +HEMG HPE P R+QAI DQLI S ID FL DAPLA +E VH Sbjct: 1 MTTGYITHPDFLKHEMGSHHPECPERIQAINDQLIRSGIDVFLHHLDAPLASEEQLELVH 60 Query: 61 TANAVALIRDNAAALAQDNLAHYPLDGDTSINRYSWNAALRAAGAAVAATDAVIAGELEN 120 + + +A +++ A + LDGDT +N ++W AALRA+GAA+A DAV+ GE+EN Sbjct: 61 SPDHIAFVKEQAP-----ESGYAMLDGDTIMNPFTWTAALRASGAAIAGVDAVMKGEVEN 115 Query: 121 AFCSVRPPGHHATPTTPMGFCLFNNVAIAARHAIDVHGLERVAIVDFDVHHGNGTEAAFK 180 FC++RPPGHHA PT MGFCLF+NVAIAAR+A++ +G++RVAI+DFDVHHGNGTEAAF Sbjct: 116 VFCAIRPPGHHAEPTRSMGFCLFDNVAIAARYAMEAYGIDRVAIIDFDVHHGNGTEAAFF 175 Query: 181 HDPRVLMVSFFQHPFYPFSGADPSEPHILNEPLPAYTAGNVVRQLVTDKWLPALHAHQPQ 240 +DP VLM SFFQHPFYP+SG D + +++N PLPA T G+VVR +V ++W+PAL +PQ Sbjct: 176 NDPNVLMCSFFQHPFYPYSGLDHAN-NMVNVPLPAATRGDVVRSIVDERWMPALRNFEPQ 234 Query: 241 MIFISAGFDAHREDDMGQMALVEADYAWMTKQIMDVARQHARGRIVSCLEGGYNLSALGR 300 +I ISAGFDAHREDD+GQM LVE DYAW+T+++ ++A ++A+GRIVSCLEGGYNLSALGR Sbjct: 235 LIIISAGFDAHREDDLGQMGLVEEDYAWITRRLKEIANEYAQGRIVSCLEGGYNLSALGR 294 Query: 301 SVVAHLKVLADL 312 SVVAH+K LAD+ Sbjct: 295 SVVAHVKALADI 306 >ref|YP_109100.1| putative histone deacetylase-family protein [Burkholderia pseudomallei K96243] ref|ZP_02448525.1| putative histone deacetylase-family protein [Burkholderia pseudomallei 91] ref|ZP_04902087.1| histone deacetylase family protein [Burkholderia pseudomallei S13] ref|ZP_04963090.1| histone deacetylase family protein [Burkholderia pseudomallei 406e] emb|CAH36511.1| putative histone deacetylase-family protein [Burkholderia pseudomallei K96243] gb|EDO82738.1| histone deacetylase family protein [Burkholderia pseudomallei 406e] gb|EDS85099.1| histone deacetylase family protein [Burkholderia pseudomallei S13] Length = 307 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 205/312 (65%), Positives = 240/312 (76%), Gaps = 5/312 (1%) Query: 1 MTTAFYTHADCQRHEMGDWHPETPLRLQAIEDQLITSRIDQFLERRDAPLADVADIERVH 60 M TAFYTH DC HEMG+WHPE+P RL AI+DQLI SRID + AP A + RVH Sbjct: 1 MPTAFYTHPDCLLHEMGEWHPESPARLSAIQDQLIASRIDDLIVHETAPFASETALARVH 60 Query: 61 TANAVALIRDNAAALAQDNLAHYPLDGDTSINRYSWNAALRAAGAAVAATDAVIAGELEN 120 T + IR + +D + +D DTS+NRY+W AALRAAGAAV ATDAV+ G +N Sbjct: 61 TQAHIDYIRSR---IPKD--GYVEIDPDTSLNRYTWRAALRAAGAAVEATDAVLEGRYDN 115 Query: 121 AFCSVRPPGHHATPTTPMGFCLFNNVAIAARHAIDVHGLERVAIVDFDVHHGNGTEAAFK 180 AFCSVRPPGHHA P MGFC FNNVAIAARHA+++HGLERVAI+DFDVHHGNGTEAAF Sbjct: 116 AFCSVRPPGHHAEPARAMGFCFFNNVAIAARHALEIHGLERVAIIDFDVHHGNGTEAAFA 175 Query: 181 HDPRVLMVSFFQHPFYPFSGADPSEPHILNEPLPAYTAGNVVRQLVTDKWLPALHAHQPQ 240 +D RVLM SFFQHP YPFSG D P+++N P+ A T G VR+ V WLP L A +PQ Sbjct: 176 NDERVLMCSFFQHPLYPFSGVDHQAPNMVNLPMAARTNGMAVREAVDLMWLPRLDAFRPQ 235 Query: 241 MIFISAGFDAHREDDMGQMALVEADYAWMTKQIMDVARQHARGRIVSCLEGGYNLSALGR 300 M+F+SAGFDAHREDD+G M LVEADY W+T+QI +VAR+HA+GRIVSCLEGGYNLSALGR Sbjct: 236 MLFVSAGFDAHREDDIGGMGLVEADYEWLTRQICEVARRHAQGRIVSCLEGGYNLSALGR 295 Query: 301 SVVAHLKVLADL 312 SVVAHL+VLA + Sbjct: 296 SVVAHLRVLAGV 307