BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0236.p         (217 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774418.1| metal ion ABC transporter permease [Herbaspi...   364   4e-99
ref|YP_004754370.1| methionine ABC transporter permease [Collimo...   332   3e-89
ref|ZP_03271075.1| binding-protein-dependent transport systems i...   317   7e-85
ref|YP_003605787.1| binding-protein-dependent transport systems ...   315   3e-84
ref|YP_001896605.1| binding-protein-dependent transporters inner...   309   2e-82

>ref|YP_003774418.1| metal ion ABC transporter permease [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ62510.1| ABC-type metal ion transport system, permease component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 217

 Score =  364 bits (935), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 201/217 (92%), Positives = 213/217 (98%)

Query: 1   MSSELIDLFISSFGETLMMVGISGLLGAVFGVPLGIALHLTERKGILPNVAFNRIAGLLV 60
           MSSELIDLF+SSFGETLMMV ISG++G++ G+PLGIALH+TE KG+LPNVAFNRIAGLLV
Sbjct: 1   MSSELIDLFVSSFGETLMMVVISGVVGSLLGIPLGIALHITEAKGVLPNVAFNRIAGLLV 60

Query: 61  NAVRSTPFIILLVAVIPFTRFFVGTSIGTAAAIVPLTIASAPFIARLVETALREVDHGLV 120
           NAVRSTPFIILLVAVIP TRFFVGTSIGTAAAIVPLTIA+APFIARLVETALREVDHGLV
Sbjct: 61  NAVRSTPFIILLVAVIPMTRFFVGTSIGTAAAIVPLTIAAAPFIARLVETALREVDHGLV 120

Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180
           EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG
Sbjct: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180

Query: 181 YQRFLPEVMLAVVLILIVFVQLVQTLGDVLVRRLSHR 217
           YQRFLPEVMLAVVLILIVFVQLVQ+LGD+LVR+LSHR
Sbjct: 181 YQRFLPEVMLAVVLILIVFVQLVQSLGDLLVRKLSHR 217


>ref|YP_004754370.1| methionine ABC transporter permease [Collimonas fungivorans Ter331]
 gb|AEK63547.1| Methionine ABC transporter permease protein [Collimonas fungivorans
           Ter331]
          Length = 217

 Score =  332 bits (850), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 196/217 (90%), Positives = 210/217 (96%)

Query: 1   MSSELIDLFISSFGETLMMVGISGLLGAVFGVPLGIALHLTERKGILPNVAFNRIAGLLV 60
           MSSE++DLF+SSFGETLMMVGISG+LGA+ GVPLGIALHLT R G+LP+  FNR+AGL+V
Sbjct: 1   MSSEMLDLFLSSFGETLMMVGISGILGALLGVPLGIALHLTGRDGVLPHPLFNRVAGLIV 60

Query: 61  NAVRSTPFIILLVAVIPFTRFFVGTSIGTAAAIVPLTIASAPFIARLVETALREVDHGLV 120
           NAVRSTPFIILLVAVIPFTRFFVGTSIGTAAAIVPLTIASAPFIARLVETALREV+ GL+
Sbjct: 61  NAVRSTPFIILLVAVIPFTRFFVGTSIGTAAAIVPLTIASAPFIARLVETALREVERGLI 120

Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180
           EAAQAMGATTWQI+YKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG
Sbjct: 121 EAAQAMGATTWQIVYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180

Query: 181 YQRFLPEVMLAVVLILIVFVQLVQTLGDVLVRRLSHR 217
           YQRFLPEVML VV+ILIVFVQLVQTLGD+LVRRLSHR
Sbjct: 181 YQRFLPEVMLLVVVILIVFVQLVQTLGDILVRRLSHR 217


>ref|ZP_03271075.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
 gb|EDZ97345.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. H160]
          Length = 217

 Score =  317 bits (812), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 177/217 (81%), Positives = 200/217 (92%)

Query: 1   MSSELIDLFISSFGETLMMVGISGLLGAVFGVPLGIALHLTERKGILPNVAFNRIAGLLV 60
           M SE+ D+F+ SF ETL+MVGISGL+GAV GVPLG+ L+LT+R+G+L NVA NR+ G++V
Sbjct: 1   MLSEMFDMFVQSFWETLIMVGISGLIGAVVGVPLGVLLYLTDRQGVLENVAVNRVMGVIV 60

Query: 61  NAVRSTPFIILLVAVIPFTRFFVGTSIGTAAAIVPLTIASAPFIARLVETALREVDHGLV 120
           NAVRSTPFIILLVAVIPFTR  VG+SIGTAAAIVPLTIA+APFIARLVETALREVD GL+
Sbjct: 61  NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAIVPLTIAAAPFIARLVETALREVDRGLI 120

Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180
           EAAQAMGATT QI++KVL+PE+  G+VAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG
Sbjct: 121 EAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180

Query: 181 YQRFLPEVMLAVVLILIVFVQLVQTLGDVLVRRLSHR 217
           YQRFLPEVMLAVVLILIVFVQLVQ+ GD LVRRLSH+
Sbjct: 181 YQRFLPEVMLAVVLILIVFVQLVQSFGDWLVRRLSHK 217


>ref|YP_003605787.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
 gb|ADG16276.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia sp. CCGE1002]
          Length = 217

 Score =  315 bits (807), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 176/217 (81%), Positives = 199/217 (91%)

Query: 1   MSSELIDLFISSFGETLMMVGISGLLGAVFGVPLGIALHLTERKGILPNVAFNRIAGLLV 60
           M SE+ D+F+ SF ETL+MVGISGL+GAV GVPLG+ L+LT+R+G+L NVA NR+ G++V
Sbjct: 1   MLSEMFDMFVQSFWETLIMVGISGLIGAVVGVPLGVLLYLTDRQGVLENVAVNRVMGVIV 60

Query: 61  NAVRSTPFIILLVAVIPFTRFFVGTSIGTAAAIVPLTIASAPFIARLVETALREVDHGLV 120
           NAVRSTPFIILLVAVIPFTR  VG+SIGTAAAIVPLTIA+APFIARLVETALREVD GL+
Sbjct: 61  NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAIVPLTIAAAPFIARLVETALREVDRGLI 120

Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180
           EAAQAMGAT  QI++KVL+PE+  G+VAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG
Sbjct: 121 EAAQAMGATASQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180

Query: 181 YQRFLPEVMLAVVLILIVFVQLVQTLGDVLVRRLSHR 217
           YQRFLPEVMLAVVLILIVFVQLVQ+ GD LVRRLSH+
Sbjct: 181 YQRFLPEVMLAVVLILIVFVQLVQSFGDWLVRRLSHK 217


>ref|YP_001896605.1| binding-protein-dependent transporters inner membrane component
           [Burkholderia phytofirmans PsJN]
 gb|ACD17381.1| binding-protein-dependent transport systems inner membrane
           component [Burkholderia phytofirmans PsJN]
          Length = 217

 Score =  309 bits (791), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 171/217 (78%), Positives = 198/217 (91%)

Query: 1   MSSELIDLFISSFGETLMMVGISGLLGAVFGVPLGIALHLTERKGILPNVAFNRIAGLLV 60
           M SE+ D+F+ SF ETL+MVGISGL+GA+ G+PLG+ L+LT+R+G+L N+A NR  G++V
Sbjct: 1   MLSEMFDMFVQSFWETLVMVGISGLVGALVGLPLGVVLYLTDRQGVLQNIAVNRAMGVIV 60

Query: 61  NAVRSTPFIILLVAVIPFTRFFVGTSIGTAAAIVPLTIASAPFIARLVETALREVDHGLV 120
           NAVRSTPFIILLVAVIPFTR  VG+SIGTAAA+VPLTIA+APFIARLVETALREVD GL+
Sbjct: 61  NAVRSTPFIILLVAVIPFTRLVVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI 120

Query: 121 EAAQAMGATTWQIIYKVLVPEAFAGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180
           EAAQAMGATT QI++KVL+PE+  G+VAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG
Sbjct: 121 EAAQAMGATTSQIVFKVLLPESLPGVVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG 180

Query: 181 YQRFLPEVMLAVVLILIVFVQLVQTLGDVLVRRLSHR 217
           YQRFLPEVML VV+ILIVFVQLVQ+ GD LVRRLSH+
Sbjct: 181 YQRFLPEVMLTVVVILIVFVQLVQSFGDWLVRRLSHK 217