BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0232.p (550 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754368.1| heat shock protein 60 family chaperone GroEL... 1015 0.0 ref|YP_003774421.1| chaperonin GroEL [Herbaspirillum seropedicae... 967 0.0 emb|CAM32690.2| chaperonin GroEL (HSP60 family) protein [Herbasp... 951 0.0 ref|YP_544476.1| chaperonin GroEL [Methylobacillus flagellatus K... 925 0.0 ref|YP_003050177.1| chaperonin GroEL [Methylovorus glucosetrophu... 910 0.0 >ref|YP_004754368.1| heat shock protein 60 family chaperone GroEL [Collimonas fungivorans Ter331] gb|AEK63545.1| Heat shock protein 60 family chaperone GroEL [Collimonas fungivorans Ter331] Length = 550 Score = 1015 bits (2624), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/530 (97%), Positives = 526/530 (99%) Query: 1 MAAKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 60 MAAKQVIFGD+ARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI Sbjct: 1 MAAKQVIFGDEARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 60 Query: 61 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 120 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI Sbjct: 61 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 120 Query: 121 DKAVVAIVSEIKTLSKPTTTSKEIAQVGSISANSDSDIGDIIAKAMDKVGKEGVITVEDG 180 DKAVVAIV+EIKTLSKPTTTSKEIAQVGSISANSD+DIG+IIAKAMDKVGKEGVITVEDG Sbjct: 121 DKAVVAIVAEIKTLSKPTTTSKEIAQVGSISANSDADIGEIIAKAMDKVGKEGVITVEDG 180 Query: 181 KSLENELDIVEGMQFDRGYLSPYFINNQEKQVVALENPFVLLFDKKVSNIRDLLPILEQV 240 KSLENELDIVEGMQFDRGYLSPYFINN EKQVVALENPFVLLFDKKVSNIRDLLPILEQV Sbjct: 181 KSLENELDIVEGMQFDRGYLSPYFINNPEKQVVALENPFVLLFDKKVSNIRDLLPILEQV 240 Query: 241 AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV 300 AK+GRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV Sbjct: 241 AKSGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV 300 Query: 301 IAEEVGLTLEKATLAELGQAKRIEISKENTTIIDGNGEAIAIESRVKQIRAQIEEATSDY 360 IAEEVGLTLEKATLAELGQAKRIEISKENTTIIDG GEA+ IE+RVKQIRAQIEEA+SDY Sbjct: 301 IAEEVGLTLEKATLAELGQAKRIEISKENTTIIDGAGEAVTIEARVKQIRAQIEEASSDY 360 Query: 361 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAFL 420 DREKLQERVAKLAGGVALI+VGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAFL Sbjct: 361 DREKLQERVAKLAGGVALIRVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAFL 420 Query: 421 RARANIKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNAVLAGQGNYGYNA 480 RARANIKDLKGDN DQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNAVLAG+GNYGYNA Sbjct: 421 RARANIKDLKGDNADQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNAVLAGKGNYGYNA 480 Query: 481 ADGTYGDMIALGILDPTKVTRSALQNAASVAALILTTEAMIAEQPEDKSA 530 ADGTYGDMIALGILDPTKVTRSALQNAASVAALILTTEAMIAEQPEDKSA Sbjct: 481 ADGTYGDMIALGILDPTKVTRSALQNAASVAALILTTEAMIAEQPEDKSA 530 >ref|YP_003774421.1| chaperonin GroEL [Herbaspirillum seropedicae SmR1] gb|ADJ62513.1| chaperonin GroEL (HSP60) protein [Herbaspirillum seropedicae SmR1] Length = 549 Score = 967 bits (2499), Expect = 0.0, Method: Compositional matrix adjust. Identities = 486/530 (91%), Positives = 511/530 (96%) Query: 1 MAAKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 60 MAAKQVIFGD+ARAK+VNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI Sbjct: 1 MAAKQVIFGDEARAKVVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 60 Query: 61 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 120 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI Sbjct: 61 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 120 Query: 121 DKAVVAIVSEIKTLSKPTTTSKEIAQVGSISANSDSDIGDIIAKAMDKVGKEGVITVEDG 180 DKAV AIV E+K L+KPTTTSKEIAQVGSISANSD+DIGDIIAKAM+KVGKEGVITVEDG Sbjct: 121 DKAVTAIVGEVKNLAKPTTTSKEIAQVGSISANSDADIGDIIAKAMEKVGKEGVITVEDG 180 Query: 181 KSLENELDIVEGMQFDRGYLSPYFINNQEKQVVALENPFVLLFDKKVSNIRDLLPILEQV 240 KSLENELDIVEGMQFDRGYLSPYFINNQEKQ+VAL+NPF+LLFDKK+SNIRDLLP+LEQV Sbjct: 181 KSLENELDIVEGMQFDRGYLSPYFINNQEKQIVALDNPFILLFDKKISNIRDLLPVLEQV 240 Query: 241 AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV 300 AKAGRPLLI+AEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV Sbjct: 241 AKAGRPLLIVAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV 300 Query: 301 IAEEVGLTLEKATLAELGQAKRIEISKENTTIIDGNGEAIAIESRVKQIRAQIEEATSDY 360 IAEEVGLTLEKATLAELGQAKR+EI KENTTIIDGNGEA IE+RV IR QI EATSDY Sbjct: 301 IAEEVGLTLEKATLAELGQAKRVEIGKENTTIIDGNGEAAGIEARVAMIRTQIGEATSDY 360 Query: 361 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAFL 420 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVA L Sbjct: 361 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL 420 Query: 421 RARANIKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNAVLAGQGNYGYNA 480 RARAN+KDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVN VL G GN+GYNA Sbjct: 421 RARANVKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNKVLEGSGNFGYNA 480 Query: 481 ADGTYGDMIALGILDPTKVTRSALQNAASVAALILTTEAMIAEQPEDKSA 530 ++GTYGD++ LG+LDP KVTRSALQNAASVA+LILTT+A++AE EDK A Sbjct: 481 SNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAEVAEDKPA 530 >emb|CAM32690.2| chaperonin GroEL (HSP60 family) protein [Herbaspirillum seropedicae] Length = 548 Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/530 (90%), Positives = 507/530 (95%), Gaps = 1/530 (0%) Query: 1 MAAKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 60 MAAKQVIFGD+ARAK+VNGVNILA + + LGPKGRNVVLERSFGAPTVTKDGVSVAKEI Sbjct: 1 MAAKQVIFGDEARAKVVNGVNILARS-QGHLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 59 Query: 61 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 120 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI Sbjct: 60 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 119 Query: 121 DKAVVAIVSEIKTLSKPTTTSKEIAQVGSISANSDSDIGDIIAKAMDKVGKEGVITVEDG 180 DKAV AIV E+K L+KPTTTSKEIAQVGSISANSD+DIGDIIAKAM+KVGKEGVITVEDG Sbjct: 120 DKAVTAIVGEVKNLAKPTTTSKEIAQVGSISANSDADIGDIIAKAMEKVGKEGVITVEDG 179 Query: 181 KSLENELDIVEGMQFDRGYLSPYFINNQEKQVVALENPFVLLFDKKVSNIRDLLPILEQV 240 KSLENELDIVEGMQFDRGYLSPYFINNQEKQ+VAL+NPF+LLFDKK+SNIRDLLP+LEQV Sbjct: 180 KSLENELDIVEGMQFDRGYLSPYFINNQEKQIVALDNPFILLFDKKISNIRDLLPVLEQV 239 Query: 241 AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV 300 AKAGRPLLI+AEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV Sbjct: 240 AKAGRPLLIVAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV 299 Query: 301 IAEEVGLTLEKATLAELGQAKRIEISKENTTIIDGNGEAIAIESRVKQIRAQIEEATSDY 360 IAEEVGLTLEKATLAELGQAKR+EI KENTTIIDGNGEA IE+RV IR QI EATSDY Sbjct: 300 IAEEVGLTLEKATLAELGQAKRVEIGKENTTIIDGNGEAAGIEARVAMIRTQIGEATSDY 359 Query: 361 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAFL 420 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVA L Sbjct: 360 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALL 419 Query: 421 RARANIKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNAVLAGQGNYGYNA 480 RARAN+KDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVN VL G GN+GYNA Sbjct: 420 RARANVKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNKVLEGSGNFGYNA 479 Query: 481 ADGTYGDMIALGILDPTKVTRSALQNAASVAALILTTEAMIAEQPEDKSA 530 ++GTYGD++ LG+LDP KVTRSALQNAASVA+LILTT+A++AE EDK A Sbjct: 480 SNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAEVAEDKPA 529 >ref|YP_544476.1| chaperonin GroEL [Methylobacillus flagellatus KT] sp|Q1H4F2.1|CH60_METFK RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein; AltName: Full=Protein Cpn60 gb|ABE48635.1| chaperonin GroEL [Methylobacillus flagellatus KT] Length = 544 Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/543 (85%), Positives = 503/543 (92%), Gaps = 2/543 (0%) Query: 1 MAAKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 60 MAAKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVVLERSFG+PTVTKDGVSVAKEI Sbjct: 1 MAAKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGSPTVTKDGVSVAKEI 60 Query: 61 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 120 EL DKLENMGAQLVKEVASKT+DNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI Sbjct: 61 ELSDKLENMGAQLVKEVASKTNDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 120 Query: 121 DKAVVAIVSEIKTLSKPTTTSKEIAQVGSISANSDSDIGDIIAKAMDKVGKEGVITVEDG 180 DKAV IV+EIK ++KPTTTSKEIAQVGSISANSD+DIG IIA AMDKVGKEGVITVEDG Sbjct: 121 DKAVAEIVNEIKAIAKPTTTSKEIAQVGSISANSDADIGQIIADAMDKVGKEGVITVEDG 180 Query: 181 KSLENELDIVEGMQFDRGYLSPYFINNQEKQVVALENPFVLLFDKKVSNIRDLLPILEQV 240 L+NELD+VEGMQFDRGYLSPYFINN E+Q+ LENPFVLL+DKK+SNIRDLLP LEQV Sbjct: 181 SGLQNELDVVEGMQFDRGYLSPYFINNPERQIALLENPFVLLYDKKISNIRDLLPTLEQV 240 Query: 241 AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV 300 AKAGRPLLIIAEDVEGEALATLVVNNIRGILK AVKAPGFGDRRKAMLEDIAILTGG V Sbjct: 241 AKAGRPLLIIAEDVEGEALATLVVNNIRGILKAVAVKAPGFGDRRKAMLEDIAILTGGTV 300 Query: 301 IAEEVGLTLEKATLAELGQAKRIEISKENTTIIDGNGEAIAIESRVKQIRAQIEEATSDY 360 IAEEVGL+LEK TL LGQAKR+EI KENTTIIDG G I+ R+ QI+ QIE+ATSDY Sbjct: 301 IAEEVGLSLEKVTLENLGQAKRVEIGKENTTIIDGAGSENNIKVRIDQIKKQIEDATSDY 360 Query: 361 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAFL 420 DREKLQERVAKLAGGVA+IKVGAATE EMKEKKARVEDALHATRAAVEEG+VPGGGVA L Sbjct: 361 DREKLQERVAKLAGGVAVIKVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVALL 420 Query: 421 RARANIKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNAVLAGQGNYGYNA 480 RAR++IK+LKGDNPDQ+AGIKIVLRAIEEPLRQIV NAGDEPSVVVN VL G GNYGYNA Sbjct: 421 RARSSIKELKGDNPDQDAGIKIVLRAIEEPLRQIVANAGDEPSVVVNKVLEGTGNYGYNA 480 Query: 481 ADGTYGDMIALGILDPTKVTRSALQNAASVAALILTTEAMIAEQPEDKSAGGMP--GGMG 538 ++GTYGD++ LG+LDP KVTRSALQNAASVA+LILTT+A++AE P++++A MP GGMG Sbjct: 481 SNGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAELPKEEAAPAMPDAGGMG 540 Query: 539 GMG 541 GMG Sbjct: 541 GMG 543 >ref|YP_003050177.1| chaperonin GroEL [Methylovorus glucosetrophus SIP3-4] ref|YP_004038838.1| chaperonin groel [Methylovorus sp. MP688] gb|ACT49650.1| chaperonin GroEL [Methylovorus glucosetrophus SIP3-4] gb|ADQ83602.1| chaperonin GroEL [Methylovorus sp. MP688] Length = 547 Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/527 (87%), Positives = 491/527 (93%) Query: 1 MAAKQVIFGDDARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 60 MAAKQVIFGD+ARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI Sbjct: 1 MAAKQVIFGDEARAKIVNGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI 60 Query: 61 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPTDLKRGI 120 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNP DLKRGI Sbjct: 61 ELKDKLENMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGFKYVAAGFNPADLKRGI 120 Query: 121 DKAVVAIVSEIKTLSKPTTTSKEIAQVGSISANSDSDIGDIIAKAMDKVGKEGVITVEDG 180 DKAVVAIV EIK +SKPTTTSKEIAQVGSISANSD+DIG IIA AMDKVGKEGVITVEDG Sbjct: 121 DKAVVAIVEEIKAISKPTTTSKEIAQVGSISANSDADIGQIIADAMDKVGKEGVITVEDG 180 Query: 181 KSLENELDIVEGMQFDRGYLSPYFINNQEKQVVALENPFVLLFDKKVSNIRDLLPILEQV 240 LENELD+VEGMQFDRGYLSPYFINN E+Q+ LENPFVLL DKK+SNIRDLLP LEQV Sbjct: 181 SGLENELDVVEGMQFDRGYLSPYFINNPERQIALLENPFVLLHDKKISNIRDLLPALEQV 240 Query: 241 AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV 300 AK+GRPLLIIAED+EGEALATLVVNNIRGILKT AVKAPGFGDRRKAMLEDIAILTGG V Sbjct: 241 AKSGRPLLIIAEDIEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGTV 300 Query: 301 IAEEVGLTLEKATLAELGQAKRIEISKENTTIIDGNGEAIAIESRVKQIRAQIEEATSDY 360 IAEEVGL LE TL +LGQAKRIE+ KENTTIIDG G I+SR+ QI+ QIE+ATSDY Sbjct: 301 IAEEVGLKLESVTLNDLGQAKRIEVGKENTTIIDGAGVEDTIKSRIDQIKKQIEDATSDY 360 Query: 361 DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVAFL 420 DREKLQERVAKLAGGVA+IKVGAATE+EMKEKKARVEDALHATRAAVEEG+V GGGVA L Sbjct: 361 DREKLQERVAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVAGGGVALL 420 Query: 421 RARANIKDLKGDNPDQEAGIKIVLRAIEEPLRQIVFNAGDEPSVVVNAVLAGQGNYGYNA 480 RARA IK+LKGDN DQ+AGIKIVLRAIEEPLRQIV NAGDEPSVVVN VL G+GNYGYNA Sbjct: 421 RARAAIKELKGDNADQDAGIKIVLRAIEEPLRQIVANAGDEPSVVVNKVLEGKGNYGYNA 480 Query: 481 ADGTYGDMIALGILDPTKVTRSALQNAASVAALILTTEAMIAEQPED 527 A+GTYGD++ LG+LDP KVTRSALQNAASVA+LILTT+A++AE P++ Sbjct: 481 ANGTYGDLVELGVLDPAKVTRSALQNAASVASLILTTDALVAELPKE 527