BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0225.p (238 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001894623.1| short chain dehydrogenase [Burkholderia phyt... 337 8e-91 ref|YP_004227517.1| short-chain dehydrogenase/reductase SDR [Bur... 325 4e-87 ref|YP_003910256.1| short-chain dehydrogenase/reductase SDR [Bur... 325 4e-87 ref|ZP_02884952.1| short-chain dehydrogenase/reductase SDR [Burk... 313 1e-83 ref|YP_004350000.1| short-chain dehydrogenase/reductase SDR [Bur... 309 3e-82 >ref|YP_001894623.1| short chain dehydrogenase [Burkholderia phytofirmans PsJN] gb|ACD15399.1| short-chain dehydrogenase/reductase SDR [Burkholderia phytofirmans PsJN] Length = 263 Score = 337 bits (864), Expect = 8e-91, Method: Compositional matrix adjust. Identities = 177/263 (67%), Positives = 213/263 (80%), Gaps = 25/263 (9%) Query: 1 MKTVDLLKPDAGLRVFISGAATGIGAAIAEAFLETGAAVYVCDINPAAVEAIRKKHPGIH 60 MKT+DLL+P GLRV ISGAA GIGAAIA+AFL+ GA VY+CD++PAA++ R HP +H Sbjct: 1 MKTIDLLRPTPGLRVLISGAAAGIGAAIAQAFLDVGANVYICDVDPAAIDRARTAHPQLH 60 Query: 61 AGVX-------------------------INNAGIAGPTGAVEDLDADAWDQTINTNLNS 95 AGV INNAGIAGPTGAVEDLD W++TI TNLNS Sbjct: 61 AGVADVSDCAQVDRIIDDARSKLGGLDLLINNAGIAGPTGAVEDLDPAEWERTIGTNLNS 120 Query: 96 QFYFLKRAVPLLKKTSENPGIITLSSVAGRLGYQFRTPYASTKWAIVGLMKSLAVELGPS 155 QFYFL++AVPLLK+TS NPGII ++SVAGRLGY FRTPYA++KWAIVG++KSLA+ELGP+ Sbjct: 121 QFYFLRKAVPLLKETSANPGIIAMASVAGRLGYAFRTPYAASKWAIVGMVKSLAIELGPN 180 Query: 156 NIRVNAILPGVVEGERMDGVIAARAKTLGVSFDEMREDYVKKISLRRLVTTRDVAAMALF 215 N+RVNAILPGVVEGERMD VI+ARA++LG+ FD+M+ +Y++KISLRR+VT DVAAMALF Sbjct: 181 NVRVNAILPGVVEGERMDRVISARAESLGIGFDQMKGEYLQKISLRRMVTVHDVAAMALF 240 Query: 216 LASPAARNISGQAISVDGNLEYL 238 LASPA +NISGQAISVDGN+EYL Sbjct: 241 LASPAGQNISGQAISVDGNVEYL 263 >ref|YP_004227517.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1001] gb|ADX54457.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1001] Length = 263 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 168/263 (63%), Positives = 202/263 (76%), Gaps = 25/263 (9%) Query: 1 MKTVDLLKPDAGLRVFISGAATGIGAAIAEAFLETGAAVYVCDINPAAVEAIRKKHPGIH 60 M ++LL+P GLRV +SG A GIGAAIA+AF + A VYVCD++P+A+E R++HP IH Sbjct: 1 MNILELLRPQPGLRVLVSGGAAGIGAAIADAFSQADATVYVCDVDPSAIERTRQRHPTIH 60 Query: 61 AGVX-------------------------INNAGIAGPTGAVEDLDADAWDQTINTNLNS 95 G+ INNAGIAGPTG ++ ++ D W++T++TNLNS Sbjct: 61 TGIANVSNGAQVEAIMDDVHAKLGGLDILINNAGIAGPTGGIDAIEPDDWERTVSTNLNS 120 Query: 96 QFYFLKRAVPLLKKTSENPGIITLSSVAGRLGYQFRTPYASTKWAIVGLMKSLAVELGPS 155 Q+YFL++AVPLLK TS +P II +SSVAGRLGY FRTPYASTKWAIVGL+KSLA+ELGPS Sbjct: 121 QYYFLRKAVPLLKATSASPSIIAMSSVAGRLGYAFRTPYASTKWAIVGLVKSLAIELGPS 180 Query: 156 NIRVNAILPGVVEGERMDGVIAARAKTLGVSFDEMREDYVKKISLRRLVTTRDVAAMALF 215 NIRVNAILPGVVEGERM VIAARA+ GVSFDEM+ Y+ KISLRR+VT D+AAM LF Sbjct: 181 NIRVNAILPGVVEGERMYRVIAARAEATGVSFDEMKGQYLAKISLRRMVTVDDIAAMTLF 240 Query: 216 LASPAARNISGQAISVDGNLEYL 238 LASPA RNISGQAISVDGN+EYL Sbjct: 241 LASPAGRNISGQAISVDGNVEYL 263 >ref|YP_003910256.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1003] gb|ADN60965.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1003] Length = 263 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 173/263 (65%), Positives = 208/263 (79%), Gaps = 25/263 (9%) Query: 1 MKTVDLLKPDAGLRVFISGAATGIGAAIAEAFLETGAAVYVCDINPAAVEAIRKKHPGIH 60 M T +LLKP AGLRV ISGAA+GIGAAIA+AF+E A VY+CD++ +AVE ++ +H Sbjct: 1 MNTFELLKPRAGLRVLISGAASGIGAAIADAFVEADAQVYICDVDRSAVEKASSRNARLH 60 Query: 61 AGVX-------------------------INNAGIAGPTGAVEDLDADAWDQTINTNLNS 95 GV INNAGIAGPTG VE ++ D WD+TI+TNLNS Sbjct: 61 TGVADVASREQVDSVIDDTRAKLGGLDILINNAGIAGPTGEVEAIEPDDWDRTISTNLNS 120 Query: 96 QFYFLKRAVPLLKKTSENPGIITLSSVAGRLGYQFRTPYASTKWAIVGLMKSLAVELGPS 155 Q+YFL++AVPLLK+TS+ PGII +SSVAGRLGY +RTPYA+TKWAIVGL+KSLA+ELGPS Sbjct: 121 QYYFLRKAVPLLKETSDCPGIIAMSSVAGRLGYAYRTPYAATKWAIVGLVKSLAIELGPS 180 Query: 156 NIRVNAILPGVVEGERMDGVIAARAKTLGVSFDEMREDYVKKISLRRLVTTRDVAAMALF 215 NIRVNAILPGVV+GERMD VIAARA++ GVSFDEM+E Y+KKISLRR+VT D+AAM LF Sbjct: 181 NIRVNAILPGVVQGERMDRVIAARAQSTGVSFDEMKEQYLKKISLRRMVTVDDIAAMTLF 240 Query: 216 LASPAARNISGQAISVDGNLEYL 238 LASPA +NI+GQAISVDGN+EYL Sbjct: 241 LASPAGQNITGQAISVDGNVEYL 263 >ref|ZP_02884952.1| short-chain dehydrogenase/reductase SDR [Burkholderia graminis C4D1M] gb|EDT09384.1| short-chain dehydrogenase/reductase SDR [Burkholderia graminis C4D1M] Length = 263 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 169/263 (64%), Positives = 204/263 (77%), Gaps = 25/263 (9%) Query: 1 MKTVDLLKPDAGLRVFISGAATGIGAAIAEAFLETGAAVYVCDINPAAVEAIRKKHPGIH 60 M T +LLKP GLRV ISGAA GIGAAIA+AF++ A VY+CD++ +AVE ++++P ++ Sbjct: 1 MNTFELLKPRPGLRVLISGAAAGIGAAIADAFVQADAQVYICDVDASAVEKAKERNPKLY 60 Query: 61 AGVX-------------------------INNAGIAGPTGAVEDLDADAWDQTINTNLNS 95 GV INNAGIAGPTG VE + W++TI+TNLNS Sbjct: 61 TGVADVANREQVDQIIDDARARLGGLDVLINNAGIAGPTGDVESIQPHDWERTISTNLNS 120 Query: 96 QFYFLKRAVPLLKKTSENPGIITLSSVAGRLGYQFRTPYASTKWAIVGLMKSLAVELGPS 155 Q+YFL +AVPLLK+TS+ P II +SSVAGRLGY FRTPYA+TKWAIVGL+KSLA+ELGP Sbjct: 121 QYYFLHKAVPLLKETSDCPAIIAMSSVAGRLGYAFRTPYAATKWAIVGLVKSLAIELGPE 180 Query: 156 NIRVNAILPGVVEGERMDGVIAARAKTLGVSFDEMREDYVKKISLRRLVTTRDVAAMALF 215 NIRVNAILPGVV+GERMD VIAARA++ GVSFDEM+E Y+KKISLRR+VT D+AAMALF Sbjct: 181 NIRVNAILPGVVQGERMDRVIAARAESTGVSFDEMKEQYLKKISLRRMVTVDDIAAMALF 240 Query: 216 LASPAARNISGQAISVDGNLEYL 238 LASPA NI+GQAISVDGN+EYL Sbjct: 241 LASPAGYNITGQAISVDGNVEYL 263 >ref|YP_004350000.1| short-chain dehydrogenase/reductase SDR [Burkholderia gladioli BSR3] gb|AEA64488.1| short-chain dehydrogenase/reductase SDR [Burkholderia gladioli BSR3] Length = 263 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 166/263 (63%), Positives = 199/263 (75%), Gaps = 25/263 (9%) Query: 1 MKTVDLLKPDAGLRVFISGAATGIGAAIAEAFLETGAAVYVCDINPAAVEAIRKKHPGIH 60 M T +LLKP GLRV +SGAA+GIGAAIAEAFL+ A V +CD++PAA+E R +HPG+H Sbjct: 1 MNTFELLKPRPGLRVVVSGAASGIGAAIAEAFLQVDARVCICDVDPAAIERARARHPGLH 60 Query: 61 A-------------------------GVXINNAGIAGPTGAVEDLDADAWDQTINTNLNS 95 A + +NNAGIAGPTG +E + + W++TI TNLNS Sbjct: 61 ATLADVGDRAQVDRLFDEVSRHFGGLDLLVNNAGIAGPTGGIETIAPEDWERTIATNLNS 120 Query: 96 QFYFLKRAVPLLKKTSENPGIITLSSVAGRLGYQFRTPYASTKWAIVGLMKSLAVELGPS 155 Q+ FL+RAVPLLK + GII +SSVAGRLGY FRTPYA++KWAIVGLMKSLAVELGPS Sbjct: 121 QYTFLRRAVPLLKANPDGGGIIAMSSVAGRLGYAFRTPYAASKWAIVGLMKSLAVELGPS 180 Query: 156 NIRVNAILPGVVEGERMDGVIAARAKTLGVSFDEMREDYVKKISLRRLVTTRDVAAMALF 215 +IRVNAILPGVVEGERMD VIAARA++ G SF+ M+E Y+ KISL R+V+ D+AAMALF Sbjct: 181 DIRVNAILPGVVEGERMDRVIAARAQSTGTSFEAMKEQYLGKISLHRMVSMADIAAMALF 240 Query: 216 LASPAARNISGQAISVDGNLEYL 238 LASPA RN+SGQAI VDGNLEYL Sbjct: 241 LASPAGRNVSGQAIGVDGNLEYL 263