BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0221.p (320 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003607064.1| methyl-accepting chemotaxis sensory transduc... 248 9e-64 ref|ZP_03266706.1| methyl-accepting chemotaxis sensory transduce... 223 4e-56 ref|YP_972147.1| methyl-accepting chemotaxis sensory transducer ... 221 1e-55 ref|YP_004236194.1| methyl-accepting chemotaxis sensory transduc... 221 2e-55 emb|CBA27946.1| Methyl-accepting chemotaxis protein I [Curvibact... 206 3e-51 >ref|YP_003607064.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1002] gb|ADG17553.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. CCGE1002] Length = 532 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 151/322 (46%), Positives = 210/322 (65%), Gaps = 18/322 (5%) Query: 1 MHSFLPLAYQIDKLARRLAGSYPDTFSTDARELLVVGAETTPVLRNGAEVLNLNFGRIDS 60 M+S LPL Q+ + AR LAG +P F+ D + + TP L NG+ +LNLN+G +D Sbjct: 1 MYSLLPLKAQVRRHARTLAGYFPAPFTRDESSGVDILGVMTPRLLNGSTLLNLNYGEVDR 60 Query: 61 FSAATGGSATIFVQRGKDFVRISTSVKKENGERAIGTLLDHAHAGYRDLLAGRSYTGFAQ 120 F+ T + T+FV G DFVR++TSVK++ GERA+GT+LD +H GYR L +G+ YTG+A Sbjct: 61 FTDKTRATGTVFVAIGDDFVRVATSVKRQTGERAVGTVLDRSHPGYRMLRSGQPYTGYAT 120 Query: 121 LFGRQYMTRYDPVRDAQGRVVAVLYVGIDVSQRFQVGIGARLGMLAFGIAGTVL----GA 176 LFG+QYMTRY+P+RD+ G V+ LYVG+DVS+ + + IG RL +L A TVL G Sbjct: 121 LFGKQYMTRYEPIRDSSGDVIGALYVGLDVSEVWNLSIGGRLALLTLA-ANTVLLLGYGR 179 Query: 177 YVWASVAAVSALPPATSGAPAIIAALLLHYGAIALGLL-ALGMGGLYWLAQRM-VTRPLV 234 + A + A P T +P + A G I GLL AL + L ++ R + L+ Sbjct: 180 LLQAVILPDQASP--TGASPPFLPA-----GVIGFGLLCALLVSALVFVTTRRGLGMQLL 232 Query: 235 DATAAAQQLAKGDLTTMIHVGRRDEIGQLTQAINGVAQGLATIVGAVRGSSERINIAAHE 294 +A AAA++LA GDLT +HV RRDE+GQL QA+NG++ GLA++VG VR +S+ I + A E Sbjct: 233 EAKAAAEKLAAGDLTAQVHVSRRDELGQLMQAMNGISVGLASVVGNVRRASDMIALGARE 292 Query: 295 IAAGNDDLSARAEAPRRAQAGA 316 IAAGN +LS+R E AQAG+ Sbjct: 293 IAAGNAELSSRTE----AQAGS 310 >ref|ZP_03266706.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. H160] gb|EEA01727.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp. H160] Length = 532 Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 148/318 (46%), Positives = 204/318 (64%), Gaps = 10/318 (3%) Query: 1 MHSFLPLAYQIDKLARRLAGSYPDTFSTDARELLVVGAETTPVLRNGAEVLNLNFGRIDS 60 MHS LPL Q+ + AR LAG +P F+ D + + TP L NG +LNLN+G +D Sbjct: 1 MHSLLPLKAQVRRHARTLAGYFPAPFTRDESNGVDILGVMTPRLLNGNTLLNLNYGEVDR 60 Query: 61 FSAATGGSATIFVQRGKDFVRISTSVKKENGERAIGTLLDHAHAGYRDLLAGRSYTGFAQ 120 F+ T + T+FV G DFVR++TSVK + GERA+GT+LD H GYR L +G+ YTG+A Sbjct: 61 FTVNTRATGTLFVAIGGDFVRVATSVKTQTGERAVGTVLDRTHPGYRMLRSGQPYTGYAT 120 Query: 121 LFGRQYMTRYDPVRDAQGRVVAVLYVGIDVSQRFQVGIGARLGMLAFGIAGTVLGAYVWA 180 LFG+QYMTRY+P+RD+ G V+ +YVG+DVS+ + + IGARL +L +L Y Sbjct: 121 LFGKQYMTRYEPIRDSAGEVIGAMYVGLDVSEVWNLSIGARLALLTLAANTVLLLGYGR- 179 Query: 181 SVAAVSALPPATSGAPAIIAALLLHYGAIALGLL-ALGMGGLYWLAQRM-VTRPLVDATA 238 + A+ PA +PA L G I GL AL + L ++ R + L++A A Sbjct: 180 ---LLQAVIPADRPSPAAALPTFLQTGVIGFGLFGALLVSALVFVTTRRGLGMQLLEAKA 236 Query: 239 AAQQLAKGDLTTMIHVGRRDEIGQLTQAINGVAQGLATIVGAVRGSSERINIAAHEIAAG 298 AA++LA GDLT +HV RRDE+GQL QA+NG++ GLA++VG VR +S+ I + A EIAAG Sbjct: 237 AAEKLAAGDLTAQVHVSRRDELGQLMQAMNGISVGLASVVGNVRRASDMIALGAREIAAG 296 Query: 299 NDDLSARAEAPRRAQAGA 316 N +LS+R E AQAG+ Sbjct: 297 NAELSSRTE----AQAGS 310 >ref|YP_972147.1| methyl-accepting chemotaxis sensory transducer [Acidovorax citrulli AAC00-1] gb|ABM34373.1| methyl-accepting chemotaxis sensory transducer [Acidovorax citrulli AAC00-1] Length = 506 Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 130/276 (47%), Positives = 172/276 (62%), Gaps = 18/276 (6%) Query: 32 ELLVVGAETTPVLRNGAEVLNLNFGRIDSFSAATGGSATIFVQRGKDFVRISTSVKKENG 91 EL A PVLR G VLN +F ID F+A TG AT+F ++G DFVRI+TSV+K++G Sbjct: 26 ELQPAPAGQPPVLRCGGRVLNGDFAAIDRFTAQTGVRATVFGRQGDDFVRIATSVRKQDG 85 Query: 92 ERAIGTLLDHAHAGYRDLLAGRSYTGFAQLFGRQYMTRYDPVRDAQGRVVAVLYVGIDVS 151 ERA+GTLLD +H YR L GRSY G+A +FGRQ +TRYDPVRDA G VV VLYVG+DVS Sbjct: 86 ERAVGTLLDRSHPAYRALTTGRSYAGYATVFGRQNLTRYDPVRDAAGHVVGVLYVGLDVS 145 Query: 152 QRFQVGIGARLGMLAFGIAGTVLGAYVWASVAAVSALPPATSGAPAIIAALLLHYGAIAL 211 A L+ +A +GA W LPP L + A+++ Sbjct: 146 G-MPALGAAARLALSVVVAQYAIGAVAWM------LLPP-----------LQPAWLAVSV 187 Query: 212 GLLALGMGGLYWLAQRMVTRPLVDATAAAQQLAKGDLTTMIHVGRRDEIGQLTQAINGVA 271 L + ++ LA+R +TRP+ + +AAQ++A GDLTT +HV RRDE+GQ+ QAING+ Sbjct: 188 ALPPVVAAVVHALARRGITRPVAEGCSAAQRVASGDLTTQMHVDRRDEVGQMLQAINGIG 247 Query: 272 QGLATIVGAVRGSSERINIAAHEIAAGNDDLSARAE 307 GL +V VR +E + +A EIA GN DL++R E Sbjct: 248 VGLTGLVTQVRQGAEALRVATREIAEGNGDLASRTE 283 >ref|YP_004236194.1| methyl-accepting chemotaxis sensory transducer [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX47627.1| methyl-accepting chemotaxis sensory transducer [Acidovorax avenae subsp. avenae ATCC 19860] Length = 506 Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 127/266 (47%), Positives = 170/266 (63%), Gaps = 18/266 (6%) Query: 42 PVLRNGAEVLNLNFGRIDSFSAATGGSATIFVQRGKDFVRISTSVKKENGERAIGTLLDH 101 PVLR G VLN +F ID F+ TG T+F ++G DFVRI+TSV+K++GERA+GTLLD Sbjct: 36 PVLRCGGRVLNGDFAAIDRFTGQTGVRGTVFARQGDDFVRIATSVRKQDGERAVGTLLDR 95 Query: 102 AHAGYRDLLAGRSYTGFAQLFGRQYMTRYDPVRDAQGRVVAVLYVGIDVSQRFQVGIGAR 161 +H YR L AGR Y G+A +FGRQ +TRYDPVRDA G+VV VLYVG+DVS A Sbjct: 96 SHPAYRALAAGRPYAGYATVFGRQNLTRYDPVRDAAGQVVGVLYVGLDVSG-MPALGAAA 154 Query: 162 LGMLAFGIAGTVLGAYVWASVAAVSALPPATSGAPAIIAALLLHYGAIALGLLALGMGGL 221 L+ +A +GA WA LPP L L + A+++ L + + Sbjct: 155 RLALSVVVAQYAIGAVAWA------LLPP-----------LQLAWLAVSVALPPVVAAVV 197 Query: 222 YWLAQRMVTRPLVDATAAAQQLAKGDLTTMIHVGRRDEIGQLTQAINGVAQGLATIVGAV 281 Y LA+R +TRP+ + +AA+++A GDLTT +HV RRDE+GQ+ QAING+ GL +V V Sbjct: 198 YVLARRGITRPVAEGCSAARRVAAGDLTTQMHVDRRDEVGQMLQAINGIGVGLTGLVTQV 257 Query: 282 RGSSERINIAAHEIAAGNDDLSARAE 307 R +E + +A EIA GN DL++R E Sbjct: 258 RQGAESLRVATREIAEGNGDLASRTE 283 >emb|CBA27946.1| Methyl-accepting chemotaxis protein I [Curvibacter putative symbiont of Hydra magnipapillata] Length = 547 Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 121/313 (38%), Positives = 179/313 (57%), Gaps = 29/313 (9%) Query: 1 MHSFLPLAYQIDKLARRLAGSYPDTFSTDARELLVVGAETTPVLRNGAEVLNLNFGRIDS 60 M F L ++D AR+LA F+ D + + V LRNG+ VLNL+F DS Sbjct: 35 MLFFTGLQRRVDNGARKLAAGLNGAFTLDMAQRVNVQGRNVGTLRNGSRVLNLDFALPDS 94 Query: 61 FSAATGGSATIFVQRGKDFVRISTSVKKENGERAIGTLLDHAHAGYRDLLAGRSYTGFAQ 120 F+ TG AT+F + G DF+R++TSV+K +GERA+GT LD + + Y D++ GR++ G+A Sbjct: 95 FTGQTGMVATVFARDGDDFIRVTTSVRKLDGERAVGTPLDRSQSAYTDVMQGRAHVGYAI 154 Query: 121 LFGRQYMTRYDPVRDAQGRVVAVLYVGIDVSQRFQVGIGARLGM-LAFGIAGTVLGAYVW 179 +FG+QY+T Y+P+RD G+V+ VL+VG+D++ A GM L+ +A + Y + Sbjct: 155 IFGKQYITHYEPIRDNSGQVIGVLFVGLDIT--------ASPGMSLSASMAWRISAVYGF 206 Query: 180 ASVAAVSALPPATSGAPAIIAALLLHYGAIALGLLALGMGGLYW-----LAQRMVTRPLV 234 V I AL + ++A + L M L W L R V PL Sbjct: 207 GEV---------------IFLALSGKFDSVAEVGMGLFMIALLWVTTYALMNRYVAAPLK 251 Query: 235 DATAAAQQLAKGDLTTMIHVGRRDEIGQLTQAINGVAQGLATIVGAVRGSSERINIAAHE 294 +A+Q++A GDLT IHVG D+IGQ+ AIN + GL T++G VR +SE +++ +E Sbjct: 252 AGRSASQRMASGDLTRQIHVGSSDDIGQVLMAINSINVGLTTLIGKVRSASEVVSMGTNE 311 Query: 295 IAAGNDDLSARAE 307 IA GN DL+ R E Sbjct: 312 IADGNVDLANRTE 324