BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0220.p (155 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002551837.1| Cache sensor-containing methyl-accepting che... 99 2e-19 ref|ZP_08403480.1| methyl-accepting chemotaxis sensory transduce... 86 2e-15 ref|ZP_04765068.1| methyl-accepting chemotaxis sensory transduce... 83 2e-14 ref|YP_001566096.1| methyl-accepting chemotaxis sensory transduc... 80 7e-14 ref|ZP_02367062.1| putative methyl-accepting chemotaxis protein ... 80 9e-14 >ref|YP_002551837.1| Cache sensor-containing methyl-accepting chemotaxis sensory transducer [Acidovorax ebreus TPSY] gb|ACM31837.1| methyl-accepting chemotaxis sensory transducer with Cache sensor [Acidovorax ebreus TPSY] Length = 564 Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 95/185 (51%), Gaps = 31/185 (16%) Query: 1 MDNFSAAMRNNASHTQQAGNLVDNASTHAGEGGKVVGSVVATMGAIRASSHKVADIIGVI 60 M+ A +R NA + +QA L NAST A +GG+VV VV TM I SS K+ADIIGVI Sbjct: 308 MEQLGATVRQNADNARQANQLAMNASTVAVQGGEVVSEVVDTMRGINESSRKIADIIGVI 367 Query: 61 XPVRTRSP-------------------------------TSSACGAMSGIETAIGSVATI 89 + ++ A M+ + TAI V I Sbjct: 368 DGIAFQTNILALNAAVEAAKEIKQLITASVERVEQGSQLVDKAGATMTEVVTAIRRVTDI 427 Query: 90 MRDIATAGAGQTEDIGEVTRAVGDIDQMTQQNAALIEQAATAAESLRHEAEKLVEQVGAF 149 M +I+ A + Q+ + +V A+ +DQ TQQNAAL+E+ A AA SL +A +LVE V F Sbjct: 428 MGEISAASSEQSSGVAQVGEAITQMDQATQQNAALVEEMAAAASSLSGQARELVEAVAVF 487 Query: 150 KLAQR 154 KLAQ+ Sbjct: 488 KLAQK 492 >ref|ZP_08403480.1| methyl-accepting chemotaxis sensory transducer [Rubrivivax benzoatilyticus JA2] gb|EGJ11813.1| methyl-accepting chemotaxis sensory transducer [Rubrivivax benzoatilyticus JA2] Length = 646 Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 66/213 (30%), Positives = 96/213 (45%), Gaps = 59/213 (27%) Query: 1 MDNFSAAMRNNASHTQQAGNLVDNASTHAGEGGKVVGSVVATMGAIRASSHKVADIIGVI 60 M+ +A + + H QA + + AG GG+VV V ATM I A + ++ DI+G I Sbjct: 435 MEQMTATVAQTSEHATQASRMASATAEAAGRGGEVVQRVAATMAEIEAGARRIGDIVGTI 494 Query: 61 XPV------------------------------RTRSPTSSACGAMSGIETAIGS----- 85 + R+ + + A + T IGS Sbjct: 495 DAIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVRALSQRSAEAAREVRTLIGSSTAAV 554 Query: 86 -----------------------VATIMRDIATAGAGQTEDIGEVTRAVGDIDQMTQQNA 122 VAT++ +I A + QTE IG+V AVGD+D+ TQQNA Sbjct: 555 DAGGALAREAGQEMQAIVEQVQRVATLIAEITAASSEQTEGIGQVNAAVGDLDRTTQQNA 614 Query: 123 ALIEQAATAAESLRHEAEKLVEQVGAFKLAQRG 155 AL+EQ+A AA+SLR +A +L VG F+L +RG Sbjct: 615 ALVEQSAAAADSLRQQAARLSAAVGVFRL-ERG 646 >ref|ZP_04765068.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] gb|EER58128.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] Length = 544 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 58/213 (27%) Query: 1 MDNFSAAMRNNASHTQQAGNLVDNASTHAGEGGKVVGSVVATMGAIRASSHKVADIIG-- 58 + ++ + AS +Q A L +AS A GG VV VA+M I ASS K+ DIIG Sbjct: 311 LSQLTSTVEQTASSSQMANQLATSASGTATRGGSVVEQAVASMHEISASSRKINDIIGLI 370 Query: 59 ------------------------------VIXPVRTRSPTSSACG-------------- 74 V VR+ + S+A Sbjct: 371 DSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAASDIKGLISSSVTAV 430 Query: 75 ------------AMSGIETAIGSVATIMRDIATAGAGQTEDIGEVTRAVGDIDQMTQQNA 122 AM I ++ V I+ +I A + Q+ IG+V ++VG+ID+MTQQNA Sbjct: 431 DGGVRHVEDAGSAMKDIVGSVQRVGDIIGEITAAASEQSSGIGQVNQSVGEIDRMTQQNA 490 Query: 123 ALIEQAATAAESLRHEAEKLVEQVGAFKLAQRG 155 AL+EQ+A AAESLR +A++L + V F+L+ G Sbjct: 491 ALVEQSAAAAESLREQAQRLSQVVQQFRLSDEG 523 >ref|YP_001566096.1| methyl-accepting chemotaxis sensory transducer [Delftia acidovorans SPH-1] gb|ABX37711.1| methyl-accepting chemotaxis sensory transducer [Delftia acidovorans SPH-1] Length = 589 Score = 80.5 bits (197), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 63/186 (33%), Positives = 85/186 (45%), Gaps = 58/186 (31%) Query: 25 ASTHAGEGGKVVGSVVATMGAIRASSHKVADIIGVI------------------------ 60 AS A GG+VV VV TM I SS ++ADI+GVI Sbjct: 329 ASQVAQRGGEVVARVVETMKGINDSSRQIADIVGVIDSIAFQTNILALNAAVEAARAGEQ 388 Query: 61 --------XPVRTRSPTSSACG--------------------------AMSGIETAIGSV 86 VRT + S+A AM GI ++ V Sbjct: 389 GRGFAVVASEVRTLAQRSAAAAKEIRQLIGASVERVEDGARLVGDAGTAMDGIVQSVQRV 448 Query: 87 ATIMRDIATAGAGQTEDIGEVTRAVGDIDQMTQQNAALIEQAATAAESLRHEAEKLVEQV 146 A + +I A + Q+ + +V +AVG +DQMTQQNAAL+EQ+A AA+SLR +AE+L V Sbjct: 449 ADTIGEITAASSEQSAGVAQVNQAVGQLDQMTQQNAALVEQSAAAAQSLREQAEQLSRTV 508 Query: 147 GAFKLA 152 FK+A Sbjct: 509 AVFKVA 514 >ref|ZP_02367062.1| putative methyl-accepting chemotaxis protein [Burkholderia oklahomensis C6786] Length = 601 Score = 80.1 bits (196), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 58/210 (27%) Query: 1 MDNFSAAMRNNASHTQQAGNLVDNASTHAGEGGKVVGSVVATMGAIRASSHKVADIIGVI 60 ++ ++ + +A +QA ++ NA++ A GG VV VV+TM I +S K++DIIGVI Sbjct: 392 IEEITSTVTQSAGAARQANDIATNAASVASRGGTVVSDVVSTMHEIEGASGKISDIIGVI 451 Query: 61 X--------------------------------PVRT-----------------RSPTSS 71 VRT S TS Sbjct: 452 DGIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRTLAQRSAQAAKEIKALIASSVTSV 511 Query: 72 ACGA---------MSGIETAIGSVATIMRDIATAGAGQTEDIGEVTRAVGDIDQMTQQNA 122 + GA MS I + +V TIMR+I+ A QT I EV RAV +D+M QQNA Sbjct: 512 STGATLVQEAGQTMSDIVGTVSNVTTIMREISNAADEQTRGIQEVNRAVAQLDEMVQQNA 571 Query: 123 ALIEQAATAAESLRHEAEKLVEQVGAFKLA 152 AL+EQ+A AA +L+ +A +L E VG F++A Sbjct: 572 ALVEQSAAAASALQTQAVELAEAVGQFRVA 601