BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0209.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACL37096.1| hypothetical protein [uncultured bacterium fCS1] 508 e-142 ref|YP_003777176.1| hypothetical protein Hsero_3790 [Herbaspiril... 507 e-142 emb|CBA33652.1| hypothetical protein Csp_B20130 [Curvibacter put... 499 e-139 ref|YP_725508.1| hypothetical protein H16_A0997 [Ralstonia eutro... 496 e-138 ref|YP_004684778.1| hypothetical protein CNE_1c09390 [Cupriavidu... 495 e-138 >gb|ACL37096.1| hypothetical protein [uncultured bacterium fCS1] Length = 305 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 243/302 (80%), Positives = 267/302 (88%), Gaps = 1/302 (0%) Query: 2 NDEELVRRIHRELADSYDEELELEIEDRTIEQLAGGVDA-VSEQDKADRRLYFRELFRLQ 60 +D+EL+RRIHR+L D YDEELE+E EDRT+ +L G + QDK RR YFRELFRLQ Sbjct: 4 SDDELMRRIHRDLIDGYDEELEMEFEDRTVAELTGDASPDFTAQDKEARRQYFRELFRLQ 63 Query: 61 AELVKLQDWVVATGHKVVILFEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRERTQ 120 ELVKLQDWVVATG KVVI+FEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRERTQ Sbjct: 64 GELVKLQDWVVATGKKVVIVFEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRERTQ 123 Query: 121 WYFQRYISHLPAAGEIVLFDRSWYNRAGVERVMGFCSDDQYEEFFRSAPEFERMLVRSGI 180 WYFQRYISHLPAAGE+VLFDRSWYNRAGVERVMGFC+DDQYEEFFR+ PEFE+MLVRSGI Sbjct: 124 WYFQRYISHLPAAGEMVLFDRSWYNRAGVERVMGFCNDDQYEEFFRTVPEFEKMLVRSGI 183 Query: 181 QLVKYWFSITDEEQHMRFLSRIHDPLKQWKLSPMDLESRRRWEDYTKAKEIMLERTHIAE 240 QL+KYWFSI+D+EQ++RFL RIHDPLKQWKLSPMDLESRRRWEDYTKAKEIMLERTHI E Sbjct: 184 QLIKYWFSISDDEQNLRFLGRIHDPLKQWKLSPMDLESRRRWEDYTKAKEIMLERTHIPE 243 Query: 241 APWWVVQAVDKKKARLNCIHHLLNQMPYGEVEHAPISLPERERHDDYFRREVSSEILVPE 300 APWWVV A DKKKARLNCI HLL QM Y EV H I LP+R RH+DY R+ V S I+VP+ Sbjct: 244 APWWVVPADDKKKARLNCIGHLLGQMDYNEVAHPAIVLPQRVRHEDYVRQPVPSNIMVPQ 303 Query: 301 VY 302 +Y Sbjct: 304 IY 305 >ref|YP_003777176.1| hypothetical protein Hsero_3790 [Herbaspirillum seropedicae SmR1] gb|ADJ65268.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 304 Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust. Identities = 251/303 (82%), Positives = 274/303 (90%), Gaps = 1/303 (0%) Query: 1 MNDEELVRRIHRELADSYDEELELEIEDRTIEQLAGGVDAV-SEQDKADRRLYFRELFRL 59 M+ EELV+R+HRELADSYDEE+ELE+EDRTI+ + G + E++K RRLYFRELFRL Sbjct: 2 MDKEELVKRVHRELADSYDEEMELELEDRTIDPVTGEFSSAHGEEEKEYRRLYFRELFRL 61 Query: 60 QAELVKLQDWVVATGHKVVILFEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRERT 119 Q ELVKLQDWVV TGHKVVI+FEGRDAAGKGGVIKRITQRLNPRV RVAALPAPNDRERT Sbjct: 62 QGELVKLQDWVVQTGHKVVIVFEGRDAAGKGGVIKRITQRLNPRVARVAALPAPNDRERT 121 Query: 120 QWYFQRYISHLPAAGEIVLFDRSWYNRAGVERVMGFCSDDQYEEFFRSAPEFERMLVRSG 179 QWYFQRY+SHLPAAGEIVLFDRSWYNRAGVERVMGFCSD+QYEEFFRS PEFERML R+G Sbjct: 122 QWYFQRYVSHLPAAGEIVLFDRSWYNRAGVERVMGFCSDEQYEEFFRSVPEFERMLTRAG 181 Query: 180 IQLVKYWFSITDEEQHMRFLSRIHDPLKQWKLSPMDLESRRRWEDYTKAKEIMLERTHIA 239 IQ++KYWFSITDEEQH+RFLSRIHDPLKQWKLSPMDLESRRRWE+YTKAKE+MLERTHI Sbjct: 182 IQVIKYWFSITDEEQHLRFLSRIHDPLKQWKLSPMDLESRRRWEEYTKAKEVMLERTHIP 241 Query: 240 EAPWWVVQAVDKKKARLNCIHHLLNQMPYGEVEHAPISLPERERHDDYFRREVSSEILVP 299 EAPWWVVQAVDKKKARLNCIHHLL QMPY EV H P+ LPERERH+DY R V ++VP Sbjct: 242 EAPWWVVQAVDKKKARLNCIHHLLQQMPYAEVPHPPVLLPERERHEDYERHPVPDSMIVP 301 Query: 300 EVY 302 E Y Sbjct: 302 EFY 304 >emb|CBA33652.1| hypothetical protein Csp_B20130 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 323 Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust. Identities = 234/302 (77%), Positives = 264/302 (87%), Gaps = 1/302 (0%) Query: 2 NDEELVRRIHRELADSYDEELELEIEDRTIEQLAGGVDA-VSEQDKADRRLYFRELFRLQ 60 ++EE++RRI ++ DSYDEELE+E++D ++LA G+ +S Q K DRR YFRELFR+Q Sbjct: 22 SEEEMIRRIRSDMLDSYDEELEMELDDHNQDELADGLSPELSAQQKQDRRTYFRELFRMQ 81 Query: 61 AELVKLQDWVVATGHKVVILFEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRERTQ 120 ELVKLQDWVVATGHKVV++FEGRDAAGKGG IKRITQRLNPRVCRVAALPAPNDRERTQ Sbjct: 82 GELVKLQDWVVATGHKVVVIFEGRDAAGKGGAIKRITQRLNPRVCRVAALPAPNDRERTQ 141 Query: 121 WYFQRYISHLPAAGEIVLFDRSWYNRAGVERVMGFCSDDQYEEFFRSAPEFERMLVRSGI 180 WYFQRY+SHLPAAGEIVLFDRSWYNRAGVERVMGFC+D+Q EEFFR+ PEFE+MLVRSGI Sbjct: 142 WYFQRYVSHLPAAGEIVLFDRSWYNRAGVERVMGFCNDEQLEEFFRTVPEFEKMLVRSGI 201 Query: 181 QLVKYWFSITDEEQHMRFLSRIHDPLKQWKLSPMDLESRRRWEDYTKAKEIMLERTHIAE 240 Q++KYWFSI+DEEQH RFL RIHDPLKQWKLSPMDL+SR RWE YT AKE MLERTHI E Sbjct: 202 QVIKYWFSISDEEQHTRFLGRIHDPLKQWKLSPMDLQSRVRWEAYTHAKEAMLERTHIPE 261 Query: 241 APWWVVQAVDKKKARLNCIHHLLNQMPYGEVEHAPISLPERERHDDYFRREVSSEILVPE 300 APWWVVQAVDKKKARLNCI HLL QMPY E+ H P+ LPER RH DY R V +E+ VPE Sbjct: 262 APWWVVQAVDKKKARLNCIQHLLGQMPYEEIPHPPVELPERVRHQDYERHPVPAEMYVPE 321 Query: 301 VY 302 +Y Sbjct: 322 IY 323 >ref|YP_725508.1| hypothetical protein H16_A0997 [Ralstonia eutropha H16] emb|CAJ92140.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 305 Score = 496 bits (1278), Expect = e-138, Method: Compositional matrix adjust. Identities = 241/304 (79%), Positives = 267/304 (87%), Gaps = 5/304 (1%) Query: 2 NDEELVRRIHRELADSYDEELELEIEDRTIEQLAGG---VDAVSEQDKADRRLYFRELFR 58 + ELVRRIH E+AD YDEE+ELE++DR + G +D +EQD RR YFRELFR Sbjct: 4 GEAELVRRIHNEVADYYDEEIELELDDREASEAFGDPVHLDDEAEQDS--RRHYFRELFR 61 Query: 59 LQAELVKLQDWVVATGHKVVILFEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRER 118 LQ ELV+LQ WV ATGHK+VI+FEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRER Sbjct: 62 LQGELVRLQSWVAATGHKIVIIFEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRER 121 Query: 119 TQWYFQRYISHLPAAGEIVLFDRSWYNRAGVERVMGFCSDDQYEEFFRSAPEFERMLVRS 178 TQWYFQRY++HLPAAGEIVLFDRSWYNRAGVERVMGFCSDDQYEEFFRS PEFERMLVRS Sbjct: 122 TQWYFQRYVAHLPAAGEIVLFDRSWYNRAGVERVMGFCSDDQYEEFFRSVPEFERMLVRS 181 Query: 179 GIQLVKYWFSITDEEQHMRFLSRIHDPLKQWKLSPMDLESRRRWEDYTKAKEIMLERTHI 238 GIQ+ KYWFSIT +EQ +RFLSRIHDPLKQWKLSPMDLES+RRWEDYTKAKEIMLERTHI Sbjct: 182 GIQVFKYWFSITHDEQRLRFLSRIHDPLKQWKLSPMDLESQRRWEDYTKAKEIMLERTHI 241 Query: 239 AEAPWWVVQAVDKKKARLNCIHHLLNQMPYGEVEHAPISLPERERHDDYFRREVSSEILV 298 AEAPWWVVQA DKK+ARLNCIHHLL+Q+PY EVE + LP RERH+DY R+ V E++V Sbjct: 242 AEAPWWVVQADDKKRARLNCIHHLLSQVPYAEVEAPSVVLPGRERHEDYVRQPVPKEMIV 301 Query: 299 PEVY 302 P+VY Sbjct: 302 PDVY 305 >ref|YP_004684778.1| hypothetical protein CNE_1c09390 [Cupriavidus necator N-1] gb|AEI76297.1| hypothetical protein CNE_1c09390 [Cupriavidus necator N-1] Length = 305 Score = 495 bits (1274), Expect = e-138, Method: Compositional matrix adjust. Identities = 239/304 (78%), Positives = 268/304 (88%), Gaps = 5/304 (1%) Query: 2 NDEELVRRIHRELADSYDEELELEIEDRTIEQLAGG---VDAVSEQDKADRRLYFRELFR 58 + ELVRRIH E+AD YDEE+ELE++DR + G +D +EQD RR YFRELFR Sbjct: 4 GEAELVRRIHNEVADYYDEEIELELDDREASEAFGDPVHLDDEAEQDS--RRHYFRELFR 61 Query: 59 LQAELVKLQDWVVATGHKVVILFEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRER 118 LQ ELV+LQ WV ATGHK+VI+FEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRER Sbjct: 62 LQGELVRLQSWVAATGHKIVIIFEGRDAAGKGGVIKRITQRLNPRVCRVAALPAPNDRER 121 Query: 119 TQWYFQRYISHLPAAGEIVLFDRSWYNRAGVERVMGFCSDDQYEEFFRSAPEFERMLVRS 178 TQWYFQRY++HLPAAGEIVLFDRSWYNRAGVERVMGFCSD+QYEEFFRS PEFE+MLVRS Sbjct: 122 TQWYFQRYVAHLPAAGEIVLFDRSWYNRAGVERVMGFCSDEQYEEFFRSVPEFEKMLVRS 181 Query: 179 GIQLVKYWFSITDEEQHMRFLSRIHDPLKQWKLSPMDLESRRRWEDYTKAKEIMLERTHI 238 GIQ++KYWFSIT +EQ +RFLSRIHDPLKQWKLSPMDLES+RRWEDYTKAKEIMLERTHI Sbjct: 182 GIQVIKYWFSITHDEQRLRFLSRIHDPLKQWKLSPMDLESQRRWEDYTKAKEIMLERTHI 241 Query: 239 AEAPWWVVQAVDKKKARLNCIHHLLNQMPYGEVEHAPISLPERERHDDYFRREVSSEILV 298 AEAPWWVVQA DKK+ARLNCIHHLL+Q+PY EVE + LP RERH+DY R+ V E++V Sbjct: 242 AEAPWWVVQADDKKRARLNCIHHLLSQVPYAEVEAPSVVLPGRERHEDYVRQPVPKEMIV 301 Query: 299 PEVY 302 P+VY Sbjct: 302 PDVY 305