BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0034.0207.p         (129 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774710.1| hypothetical protein Hsero_1286 [Herbaspiril...   168   3e-40
ref|YP_002946541.1| hypothetical protein Vapar_4670 [Variovorax ...   108   2e-22
ref|YP_285207.1| hypothetical protein Daro_1991 [Dechloromonas a...   103   8e-21
ref|YP_932134.1| hypothetical protein azo0630 [Azoarcus sp. BH72...   102   1e-20
ref|YP_004157565.1| hypothetical protein Varpa_5298 [Variovorax ...   100   6e-20

>ref|YP_003774710.1| hypothetical protein Hsero_1286 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62802.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 166

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 99/123 (80%)

Query: 7   AGIVKVVSGNVQVLRREQPSLAHVGDRVFSGDRLLTAEGAAVGITLRDDTLLSLGPKSNF 66
           A IVKV+ G VQ  R  +     VG+R++ GDR+LTA  ++VG TLRDDTL+SLGP S F
Sbjct: 44  AAIVKVMRGEVQAQREGKTRPLAVGERLYEGDRVLTAAASSVGFTLRDDTLISLGPNSQF 103

Query: 67  LLEQYNFDASSGEGNVAVRVVKGTLRYVTGLIGKHAPERQQVATPTATIGIRGTDFIVDV 126
           LLEQ+ F+  + EGN+AVR+VKGTLRYV+GLIGKHAPERQQ +TPTATIGIRGTDFIV+V
Sbjct: 104 LLEQFVFNEKTDEGNIAVRMVKGTLRYVSGLIGKHAPERQQFSTPTATIGIRGTDFIVEV 163

Query: 127 ADE 129
           A E
Sbjct: 164 AGE 166


>ref|YP_002946541.1| hypothetical protein Vapar_4670 [Variovorax paradoxus S110]
 gb|ACS21275.1| hypothetical protein Vapar_4670 [Variovorax paradoxus S110]
          Length = 164

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/119 (47%), Positives = 83/119 (69%), Gaps = 1/119 (0%)

Query: 7   AGIVKVVSGNVQVLRRE-QPSLAHVGDRVFSGDRLLTAEGAAVGITLRDDTLLSLGPKSN 65
           AG VK V GNVQ+L     P +A+ GD + + DR++T   ++  + LRDDT L +GP S 
Sbjct: 40  AGFVKSVRGNVQLLSTAGTPRVANAGDALAAVDRIVTGPDSSASVVLRDDTTLVVGPSSR 99

Query: 66  FLLEQYNFDASSGEGNVAVRVVKGTLRYVTGLIGKHAPERQQVATPTATIGIRGTDFIV 124
             L++++F+A++ EG V V +++G++R +TGLIGK  P+  +V T TATIGIRGTDFIV
Sbjct: 100 LDLKEFHFNATTHEGGVLVSLLRGSMRMITGLIGKTNPDAIRVETQTATIGIRGTDFIV 158


>ref|YP_285207.1| hypothetical protein Daro_1991 [Dechloromonas aromatica RCB]
 gb|AAZ46737.1| conserved hypothetical protein [Dechloromonas aromatica RCB]
          Length = 143

 Score =  103 bits (257), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 53/120 (44%), Positives = 78/120 (65%)

Query: 7   AGIVKVVSGNVQVLRREQPSLAHVGDRVFSGDRLLTAEGAAVGITLRDDTLLSLGPKSNF 66
           AG++KV  G V + R  +   A VG  V   DR+ TA   +VG+TLRD+TLLS GP S  
Sbjct: 18  AGMIKVSMGLVNIERDGKKLAAEVGTPVLVADRIRTAADGSVGVTLRDNTLLSAGPNSLI 77

Query: 67  LLEQYNFDASSGEGNVAVRVVKGTLRYVTGLIGKHAPERQQVATPTATIGIRGTDFIVDV 126
           +++++ FD ++ +GN++V + KGTL   +G I K  PE     TPT+ +G+RGT+FIV+V
Sbjct: 78  IIDRFAFDNTTQDGNMSVSIRKGTLSVASGKIAKRTPESVDFHTPTSVLGVRGTEFIVEV 137


>ref|YP_932134.1| hypothetical protein azo0630 [Azoarcus sp. BH72]
 emb|CAL93247.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
          Length = 147

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 83/123 (67%)

Query: 6   PAGIVKVVSGNVQVLRREQPSLAHVGDRVFSGDRLLTAEGAAVGITLRDDTLLSLGPKSN 65
           P G VK +SG+  ++       A VG  VF+GDR+ T    ++G+TL+D+T++++GP + 
Sbjct: 25  PIGYVKTLSGDAVIVGSSGEQAADVGSAVFAGDRIRTRANGSLGLTLKDNTMMAIGPDTE 84

Query: 66  FLLEQYNFDASSGEGNVAVRVVKGTLRYVTGLIGKHAPERQQVATPTATIGIRGTDFIVD 125
             ++++ +  +S +  +  R+++GTL++V+G+I K  PE   ++TPTATIG+RGT F+V 
Sbjct: 85  ISVDEFAYAPASEQLRLGARIMRGTLQFVSGIIAKLRPEAVTISTPTATIGVRGTRFLVK 144

Query: 126 VAD 128
           VA+
Sbjct: 145 VAE 147


>ref|YP_004157565.1| hypothetical protein Varpa_5298 [Variovorax paradoxus EPS]
 gb|ADU39454.1| hypothetical protein Varpa_5298 [Variovorax paradoxus EPS]
          Length = 161

 Score =  100 bits (250), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/119 (46%), Positives = 80/119 (67%), Gaps = 1/119 (0%)

Query: 7   AGIVKVVSGNVQVLRREQPSLAHVG-DRVFSGDRLLTAEGAAVGITLRDDTLLSLGPKSN 65
           AG VK V GNVQ+L     +      D + S DR++T   ++V + LRDDT L +GP S 
Sbjct: 37  AGFVKSVRGNVQLLSAAGTTRTAAAGDALGSVDRIVTGPDSSVAVVLRDDTTLVVGPSSR 96

Query: 66  FLLEQYNFDASSGEGNVAVRVVKGTLRYVTGLIGKHAPERQQVATPTATIGIRGTDFIV 124
             L++++FDA++ +G + V +++G++R +TGLIGK  P+  +V T TATIGIRGTDFIV
Sbjct: 97  LDLKEFHFDATTRDGGLLVSLLRGSMRMITGLIGKTNPDAVRVETQTATIGIRGTDFIV 155