BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0197.p (199 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777171.1| transcription regulator protein [Herbaspiril... 282 2e-74 ref|YP_004752169.1| TetR family transcriptional regulator [Colli... 257 6e-67 ref|YP_284326.1| TetR family transcriptional regulator [Dechloro... 210 8e-53 gb|EGD02526.1| TetR family regulatory protein [Burkholderia sp. ... 207 7e-52 ref|ZP_04941717.1| Transcriptional regulator [Burkholderia cenoc... 206 1e-51 >ref|YP_003777171.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] gb|ADJ65263.1| transcription regulator protein [Herbaspirillum seropedicae SmR1] Length = 201 Score = 282 bits (721), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 139/199 (69%), Positives = 159/199 (79%), Gaps = 1/199 (0%) Query: 1 MRDTYAETKFSILQAGRRLIAQKGFTGVGLNELLAAADIPKGSFYHYFGSKERYGRELIE 60 MR+ Y E K +IL AGR LIAQKG++ VGL+E+LAAA IPKGSFYHYFGSKE+YGRELIE Sbjct: 1 MREHYGENKRNILMAGRALIAQKGYSSVGLSEILAAAAIPKGSFYHYFGSKEQYGRELIE 60 Query: 61 QYVDEYLQRLDKSFSADGQSDTTARERLLTYWGYWLETQCCEIAEHKCLVVKLSAEVADL 120 YV YL+ L++ D +ARERLLTYWGYWLE+QCC+ E +CLVVKLSAEVADL Sbjct: 61 HYVAGYLESLERVL-GDPAHGASARERLLTYWGYWLESQCCQELEQRCLVVKLSAEVADL 119 Query: 121 SDDMRVALHTGTEAFIARIAEAIRTGVAEGSLHTVLEPYRTAQMLYQMWLGASLLSKLSR 180 S+DMR ALH GT+AFI RIA I G+AEGSLHTVL P TA MLYQ WLGASLLS+LSR Sbjct: 120 SEDMRQALHQGTQAFIERIAACIAQGIAEGSLHTVLHPLATATMLYQQWLGASLLSRLSR 179 Query: 181 DREALESAMDVTRRVLVAP 199 DR +E+AM VTRRVLV P Sbjct: 180 DRAPMEAAMLVTRRVLVLP 198 >ref|YP_004752169.1| TetR family transcriptional regulator [Collimonas fungivorans Ter331] gb|AEK61346.1| transcriptional regulator, TetR family [Collimonas fungivorans Ter331] Length = 204 Score = 257 bits (657), Expect = 6e-67, Method: Compositional matrix adjust. Identities = 129/200 (64%), Positives = 153/200 (76%), Gaps = 1/200 (0%) Query: 1 MRDTYAETKFSILQAGRRLIAQKGFTGVGLNELLAAADIPKGSFYHYFGSKERYGRELIE 60 MRD Y TK IL AG+R+IA KGF+GVGL+E+L AA IPKGSFYHYFGSKE+YGR L+E Sbjct: 1 MRDKYDTTKRHILDAGQRIIAVKGFSGVGLSEILNAAAIPKGSFYHYFGSKEQYGRALME 60 Query: 61 QYVDEYLQRLDKSFSADGQ-SDTTARERLLTYWGYWLETQCCEIAEHKCLVVKLSAEVAD 119 QYVD YLQ +D+ Q + ARERLL YWG+WL+TQ A KCLVVKLSAEV+D Sbjct: 61 QYVDNYLQAMDEVLQVTLQPAQEPARERLLRYWGHWLDTQSGAEAMDKCLVVKLSAEVSD 120 Query: 120 LSDDMRVALHTGTEAFIARIAEAIRTGVAEGSLHTVLEPYRTAQMLYQMWLGASLLSKLS 179 LSDDMR+AL GT +AR+A+ I G+A+GSL LEP +TAQMLYQ+WLGASLL+KL Sbjct: 121 LSDDMRLALCEGTTQVMARLADCIAEGIADGSLRIELEPQKTAQMLYQLWLGASLLAKLQ 180 Query: 180 RDREALESAMDVTRRVLVAP 199 RDR ALE+AMDVT +L P Sbjct: 181 RDRSALENAMDVTLNILAPP 200 >ref|YP_284326.1| TetR family transcriptional regulator [Dechloromonas aromatica RCB] gb|AAZ45856.1| transcriptional regulator, TetR family [Dechloromonas aromatica RCB] Length = 194 Score = 210 bits (535), Expect = 8e-53, Method: Compositional matrix adjust. Identities = 108/196 (55%), Positives = 135/196 (68%), Gaps = 4/196 (2%) Query: 1 MRDTYAETKFSILQAGRRLIAQKGFTGVGLNELLAAADIPKGSFYHYFGSKERYGRELIE 60 M + + T+ IL+ G R+IA KGF VGLNE+L +A +PKGSFYHYF SKE+YG+ L++ Sbjct: 1 MNNRHDNTRQHILETGHRIIAGKGFASVGLNEILTSAGVPKGSFYHYFESKEQYGQALLQ 60 Query: 61 QYVDEYLQRLDKSFSADGQSDTTARERLLTYWGYWLETQCCEIAEHKCLVVKLSAEVADL 120 +Y D YL LD+ F+AD S ERL+ YW WL Q AE KCLVVKL+ EV+DL Sbjct: 61 EYFDHYLADLDELFAADAAS---GHERLIRYWQRWLGKQLEACAEQKCLVVKLAGEVSDL 117 Query: 121 SDDMRVALHTGTEAFIARIAEAIRTGVAEGSLHTVLEPYRTAQMLYQMWLGASLLSKLSR 180 SD MR+ L GT+ + RIA I GVA+GS+ L+P TAQ LYQMWLGASLL KL R Sbjct: 118 SDAMRITLRDGTDQIVKRIARIIEAGVADGSV-PPLDPQMTAQTLYQMWLGASLLGKLHR 176 Query: 181 DREALESAMDVTRRVL 196 D ALE+AM TR++L Sbjct: 177 DTAALENAMVFTRKLL 192 >gb|EGD02526.1| TetR family regulatory protein [Burkholderia sp. TJI49] Length = 206 Score = 207 bits (527), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 104/195 (53%), Positives = 132/195 (67%), Gaps = 4/195 (2%) Query: 6 AETKFSILQAGRRLIAQKGFTGVGLNELLAAADIPKGSFYHYFGSKERYGRELIEQYVDE 65 AE + IL + ++ KGF+ VGLNE+LAAA IPKGSFYHYFGSKE +G L+E Y D Sbjct: 7 AEVRQHILNIAKPIMLHKGFSAVGLNEILAAAGIPKGSFYHYFGSKEAFGEALLESYFDG 66 Query: 66 YLQRLDKSFSADGQSDTTARERLLTYWGYWLETQCCEIAEHKCLVVKLSAEVADLSDDMR 125 YL LDK G T ERL+TYW WL TQC + E KCL VKL AEV+DLS+ MR Sbjct: 67 YLAHLDKLLRHQG---GTGAERLMTYWSNWLHTQCADDPEGKCLAVKLGAEVSDLSEAMR 123 Query: 126 VALHTGTEAFIARIAEAIRTGVAEGSLHTVLEPYRTAQMLYQMWLGASLLSKLSRDREAL 185 L GT + RIA I G+A+GSL + +P +TA +LY++WLGA+LL K+ R+R+ L Sbjct: 124 AVLRRGTSQIVERIAGGIDAGLADGSLSGIDDPPQTAALLYELWLGATLLEKIHRNRKPL 183 Query: 186 ESAMDVTRRVL-VAP 199 E+AM TRR+L +AP Sbjct: 184 ETAMAATRRMLNLAP 198 >ref|ZP_04941717.1| Transcriptional regulator [Burkholderia cenocepacia PC184] gb|EAY64888.1| Transcriptional regulator [Burkholderia cenocepacia PC184] Length = 206 Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 104/194 (53%), Positives = 128/194 (65%), Gaps = 3/194 (1%) Query: 6 AETKFSILQAGRRLIAQKGFTGVGLNELLAAADIPKGSFYHYFGSKERYGRELIEQYVDE 65 AE + IL + ++ KGF+ VGLNE+LAAA IPKGSFYHYFGSKE +G L+E Y + Sbjct: 7 AEVRQHILNIAKPIMLHKGFSAVGLNEILAAAGIPKGSFYHYFGSKEAFGEALLESYFEG 66 Query: 66 YLQRLDKSFSADGQSDTTARERLLTYWGYWLETQCCEIAEHKCLVVKLSAEVADLSDDMR 125 YL LD Q T ERL+TYWG WL TQC + E KCL VKL AEV+DLS+ MR Sbjct: 67 YLAHLDNLLK---QQAGTGAERLMTYWGNWLHTQCADDPEGKCLAVKLGAEVSDLSEAMR 123 Query: 126 VALHTGTEAFIARIAEAIRTGVAEGSLHTVLEPYRTAQMLYQMWLGASLLSKLSRDREAL 185 L GT I R+A I G+A+GSL V +P TA +LY++WLGA+LL K+ RDR+ L Sbjct: 124 AVLRRGTSQIIERLAGGIEAGLADGSLSGVDDPSYTAAILYELWLGATLLEKIHRDRKPL 183 Query: 186 ESAMDVTRRVLVAP 199 E AM TRR+L P Sbjct: 184 ERAMAETRRMLNLP 197