BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0176.p (274 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769932.1| ABC transporter permease protein [Bradyrhizobiu... 366 2e-99 ref|YP_002490106.1| binding-protein-dependent transport systems ... 357 1e-96 ref|YP_001767462.1| binding-protein-dependent transport systems ... 353 1e-95 ref|YP_001527290.1| ABC transporter permease [Azorhizobium cauli... 350 1e-94 ref|YP_555991.1| nitrate/sulfonate/bicarbonate ABC transporter i... 346 2e-93 >ref|NP_769932.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48557.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 283 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 179/258 (69%), Positives = 208/258 (80%) Query: 17 RFAVPIFLVLFWEAFSRSGAIPASLLPAPSRVFATWMDWIFGYSEAAQDSSGRWIFDAMA 76 R VP L+ WEAF+RSG +P +LLPAPS V DW+FG+ E Q SG W+ DA+A Sbjct: 25 RVVVPALLIAGWEAFARSGMLPPALLPAPSAVLHALGDWVFGFDETTQTYSGHWLRDALA 84 Query: 77 SCMRVTAGYLIAAMSGIALGVAIGWWRWVEKAIEPTVQMLRPIPPVSWIPLAIIWFGIAN 136 S +RV G+ +A+ GI GVAIGW R EK +EPT+QMLRPIPPVSWIPLAIIWFGIA+ Sbjct: 85 SALRVFGGFALASALGILAGVAIGWSRLFEKTLEPTLQMLRPIPPVSWIPLAIIWFGIAD 144 Query: 137 KPAIFLVFLGAFFPILMNTVHGVKTSDRNLLRAAAMAGANQSQLLRFVILPAAMPSIFAG 196 KPAIFLVFLGAFFP+LMN++HGVKT D NL+RA AM GA+Q Q+L ++LPAA+PSIFAG Sbjct: 145 KPAIFLVFLGAFFPVLMNSIHGVKTVDHNLVRAGAMMGASQRQMLTDIVLPAALPSIFAG 204 Query: 197 LRIGIGSAWMLTVTAEMVAVKSGLGYALWDSYYFLRYDLVIAAMISIGLLGYLADLILKL 256 LRI +GSAWMLTVTAEMVAVKSGLGY LWDSYYFLRYD+V+AAMISIGLLGYL+DL LK Sbjct: 205 LRIAVGSAWMLTVTAEMVAVKSGLGYVLWDSYYFLRYDIVLAAMISIGLLGYLSDLGLKA 264 Query: 257 IMNSVLRWQHVATVQGKA 274 IM LRWQ TVQG+A Sbjct: 265 IMARTLRWQQTTTVQGRA 282 >ref|YP_002490106.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] gb|ACL62939.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium nodulans ORS 2060] Length = 283 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 174/257 (67%), Positives = 206/257 (80%) Query: 17 RFAVPIFLVLFWEAFSRSGAIPASLLPAPSRVFATWMDWIFGYSEAAQDSSGRWIFDAMA 76 R VP+ ++ WEAFSRSG +P SLLP PS V DW+ G + QD SG W+ A++ Sbjct: 25 RVVVPVLILAGWEAFSRSGYLPQSLLPPPSAVLHALGDWVLGVDGSTQDYSGTWLRHALS 84 Query: 77 SCMRVTAGYLIAAMSGIALGVAIGWWRWVEKAIEPTVQMLRPIPPVSWIPLAIIWFGIAN 136 S RV AG++IA +SGI +G AIGW R EK +EPT+QMLRP+PPVSWIPLAIIWFGIA+ Sbjct: 85 STWRVLAGFVIAGLSGILIGTAIGWSRSAEKTLEPTLQMLRPVPPVSWIPLAIIWFGIAD 144 Query: 137 KPAIFLVFLGAFFPILMNTVHGVKTSDRNLLRAAAMAGANQSQLLRFVILPAAMPSIFAG 196 KPAIFLVFLGAFFP LMNT+HGVKT DRNL+RA AM GA QLL +++PAA+PSIFAG Sbjct: 145 KPAIFLVFLGAFFPTLMNTIHGVKTIDRNLIRAGAMMGATGRQLLMHIVVPAALPSIFAG 204 Query: 197 LRIGIGSAWMLTVTAEMVAVKSGLGYALWDSYYFLRYDLVIAAMISIGLLGYLADLILKL 256 LRI IGSAWMLTVTAEMVAVKSG+GY LWDSYYFLRYD+VIA+M+SIGLLGYL+D +K Sbjct: 205 LRIAIGSAWMLTVTAEMVAVKSGVGYVLWDSYYFLRYDMVIASMVSIGLLGYLSDFAIKQ 264 Query: 257 IMNSVLRWQHVATVQGK 273 +M+ VLRWQ TVQG+ Sbjct: 265 LMSVVLRWQRNTTVQGR 281 >ref|YP_001767462.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] gb|ACA15028.1| binding-protein-dependent transport systems inner membrane component [Methylobacterium sp. 4-46] Length = 288 Score = 353 bits (907), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 184/267 (68%), Positives = 217/267 (81%) Query: 7 LMRSLSEAKWRFAVPIFLVLFWEAFSRSGAIPASLLPAPSRVFATWMDWIFGYSEAAQDS 66 L R L+ R A+P+ LV WEAF+RSGA+P +LLPAPS V DW+ G E+ Q S Sbjct: 22 LRRRLAGWAERAALPLVLVAGWEAFARSGALPPALLPAPSAVLHALADWMLGLDESTQSS 81 Query: 67 SGRWIFDAMASCMRVTAGYLIAAMSGIALGVAIGWWRWVEKAIEPTVQMLRPIPPVSWIP 126 SG W DA+AS RV AGY IAA+ G+ LGVAIGWWR VE+ +EPT+QMLRPIPPVSWIP Sbjct: 82 SGHWPSDALASLSRVLAGYAIAALCGVGLGVAIGWWRLVERTVEPTLQMLRPIPPVSWIP 141 Query: 127 LAIIWFGIANKPAIFLVFLGAFFPILMNTVHGVKTSDRNLLRAAAMAGANQSQLLRFVIL 186 LAIIWFGIA++PAIFLVFLGAFFPILMNT+HGV++ DRNL+RA AM GA++ QLL ++L Sbjct: 142 LAIIWFGIADRPAIFLVFLGAFFPILMNTIHGVRSVDRNLIRAGAMMGASERQLLARIVL 201 Query: 187 PAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKSGLGYALWDSYYFLRYDLVIAAMISIGLL 246 PAA+P+I +GLRI IGSAWMLTVTAEMVAVKSGLGY LWDSYYFLRYD+V+AAMISIGLL Sbjct: 202 PAALPAIVSGLRIAIGSAWMLTVTAEMVAVKSGLGYVLWDSYYFLRYDIVLAAMISIGLL 261 Query: 247 GYLADLILKLIMNSVLRWQHVATVQGK 273 GYL+DL LK + +VL WQ TVQG+ Sbjct: 262 GYLSDLCLKAVAATVLHWQRGTTVQGR 288 >ref|YP_001527290.1| ABC transporter permease [Azorhizobium caulinodans ORS 571] dbj|BAF90372.1| ABC transporter permease protein [Azorhizobium caulinodans ORS 571] Length = 270 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 182/257 (70%), Positives = 210/257 (81%) Query: 17 RFAVPIFLVLFWEAFSRSGAIPASLLPAPSRVFATWMDWIFGYSEAAQDSSGRWIFDAMA 76 RF VP+ ++ WE FSRSGA+P +LLPAPS V W+DW+F Q +G WIFD MA Sbjct: 12 RFVVPVLILAGWEMFSRSGALPPALLPAPSAVAWAWLDWVFDIDGNTQSYAGHWIFDVMA 71 Query: 77 SCMRVTAGYLIAAMSGIALGVAIGWWRWVEKAIEPTVQMLRPIPPVSWIPLAIIWFGIAN 136 S RV AG+ IA + + LGVAIGW R++E IEPT+QMLRPIPPVSWIPLAIIWFGIA+ Sbjct: 72 STWRVAAGFGIATVMAVFLGVAIGWSRFIEVTIEPTLQMLRPIPPVSWIPLAIIWFGIAD 131 Query: 137 KPAIFLVFLGAFFPILMNTVHGVKTSDRNLLRAAAMAGANQSQLLRFVILPAAMPSIFAG 196 KPAIFLVFLGAFFPIL+NT+HGVKT DRNL+RA AM G Q QLLRF++LPAAMPSIFAG Sbjct: 132 KPAIFLVFLGAFFPILLNTIHGVKTVDRNLIRAGAMVGGGQRQLLRFIVLPAAMPSIFAG 191 Query: 197 LRIGIGSAWMLTVTAEMVAVKSGLGYALWDSYYFLRYDLVIAAMISIGLLGYLADLILKL 256 LRIGIGSAWMLTVTAEMVAVKSG+GY LWDSYYFLRYD+V+AAM SIGLLGYL+DL+++L Sbjct: 192 LRIGIGSAWMLTVTAEMVAVKSGVGYVLWDSYYFLRYDIVLAAMASIGLLGYLSDLLIRL 251 Query: 257 IMNSVLRWQHVATVQGK 273 I VLRWQ T+ G Sbjct: 252 ISARVLRWQQGTTLSGS 268 >ref|YP_555991.1| nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein [Burkholderia xenovorans LB400] gb|ABE36641.1| ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit [Burkholderia xenovorans LB400] Length = 273 Score = 346 bits (888), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 167/257 (64%), Positives = 205/257 (79%) Query: 17 RFAVPIFLVLFWEAFSRSGAIPASLLPAPSRVFATWMDWIFGYSEAAQDSSGRWIFDAMA 76 R VP+ L+ WEAFSRSG +PA+LLPAPS+V W DWIF Q SG W+FD A Sbjct: 15 RGIVPVLLLAGWEAFSRSGILPAALLPAPSQVLIAWADWIFATDGNTQTYSGHWLFDIAA 74 Query: 77 SCMRVTAGYLIAAMSGIALGVAIGWWRWVEKAIEPTVQMLRPIPPVSWIPLAIIWFGIAN 136 S RV AG+ IA + G+A+G+AIGW R VE +EPT+Q LRP+PPVSWIPLAIIWFGIAN Sbjct: 75 SSGRVFAGFGIATVLGVAIGMAIGWSRAVESLVEPTLQTLRPVPPVSWIPLAIIWFGIAN 134 Query: 137 KPAIFLVFLGAFFPILMNTVHGVKTSDRNLLRAAAMAGANQSQLLRFVILPAAMPSIFAG 196 KPAIFLVF+G+FFP+L++T+HGVKT DR+LLRA AM G + LLR ++ PAA+PSIF+G Sbjct: 135 KPAIFLVFMGSFFPVLLSTIHGVKTCDRDLLRAGAMTGGSPQMLLRHIVFPAALPSIFSG 194 Query: 197 LRIGIGSAWMLTVTAEMVAVKSGLGYALWDSYYFLRYDLVIAAMISIGLLGYLADLILKL 256 LRI IGSAWMLTVTAEMVAVKSG+GY LWDSYYFLRYD+VIA+M+SIGLLG+ +D ++K Sbjct: 195 LRIAIGSAWMLTVTAEMVAVKSGVGYVLWDSYYFLRYDIVIASMVSIGLLGFASDYVIKR 254 Query: 257 IMNSVLRWQHVATVQGK 273 I +LRWQ +T+Q + Sbjct: 255 IAARILRWQRGSTLQAR 271