BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0172.p (237 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001353356.1| hypothetical protein mma_1666 [Janthinobacte... 182 4e-44 ref|YP_001564897.1| hypothetical protein Daci_3881 [Delftia acid... 180 2e-43 ref|YP_004488306.1| hypothetical protein DelCs14_2941 [Delftia s... 177 1e-42 ref|YP_004681700.1| hypothetical protein CNE_2c15050 [Cupriavidu... 174 1e-41 ref|ZP_03541307.1| conserved hypothetical protein [Comamonas tes... 168 7e-40 >ref|YP_001353356.1| hypothetical protein mma_1666 [Janthinobacterium sp. Marseille] gb|ABR91258.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 246 Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 97/235 (41%), Positives = 142/235 (60%), Gaps = 11/235 (4%) Query: 6 MIATVAVHGLLGMQSAFAAGAMN--------VDDAQVLGANKCQLEAWGKFNRDGTERWL 57 ++ A+H LLG+ + AAG++N DDA+++ A CQ+E+W K N+ TE W Sbjct: 10 LLRHPALHALLGL--SLAAGSLNSHAARPMITDDARIVDAKACQVESWVKDNKGSTEYWA 67 Query: 58 NPSCNLTGNLEVSWGNSWQRDGAGMYLANSQLQGKTVFREMSPDSYGVGMLAGVVRQTDS 117 P+CN TGNLEVS+G S LQGKT+F+ + + +G+G+ G Q S Sbjct: 68 IPACNFTGNLEVSFGGSAINQNGRTQNQGYVLQGKTLFKPLEKNGWGIGLAFGNSMQPRS 127 Query: 118 GDDGRQRSWNVYSKLLTSFSFKDDAVLLHTNLGAIRKGKEQTTRLTWGLGNETKLADRLS 177 D R + Y+ + SFSF+DD V+LHTN+G + R TWGLG+ET+L++R Sbjct: 128 -DTERHLLSSPYAYVPASFSFRDDRVVLHTNVGWLHDKPNNRNRATWGLGSETQLSERSW 186 Query: 178 FIGEVFGENKGKPSYQAGVRATLVPEHVELDLTYGNTFGADTRGRYVVLGLRFIT 232 I E F ++ GKP YQ GVR LVP+HV++D TYGN FG+ + R++ +GLR ++ Sbjct: 187 LIAETFDQSAGKPFYQIGVRHWLVPDHVQIDTTYGNRFGSGSEERWISIGLRLLS 241 >ref|YP_001564897.1| hypothetical protein Daci_3881 [Delftia acidovorans SPH-1] gb|ABX36512.1| conserved hypothetical protein [Delftia acidovorans SPH-1] Length = 237 Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 87/216 (40%), Positives = 132/216 (61%), Gaps = 3/216 (1%) Query: 17 GMQSAFAAGAMNVDDAQVLGANKCQLEAWGKFNRDGTERWLNPSCNLTGNLEVSWGNSWQ 76 G A AA M DDA+++ A CQLE+W K +D TE W P+CN TGNLE++ G + Sbjct: 20 GTSPAHAARPMITDDARIVDAKSCQLESWVKSKKDSTEFWAQPACNFTGNLELTLGAART 79 Query: 77 RDGAGMYLANSQLQGKTVFREMSPDSYGVGMLAGVVRQTDSGDDGRQRSWNVYSKLLTSF 136 R+ + +QGKT+F+E+ P+ +G G+ G R + D+G+ R ++Y+ + +F Sbjct: 80 REDGSSRTTDVVIQGKTLFKELQPNGWGWGLAVGNARHPN--DEGQGRG-DLYAYVPVTF 136 Query: 137 SFKDDAVLLHTNLGAIRKGKEQTTRLTWGLGNETKLADRLSFIGEVFGENKGKPSYQAGV 196 S +DD + HTN+G +R + +TWGL E +L+ I E FG+N+GKP YQ G+ Sbjct: 137 SMRDDRLFFHTNVGWLRTAQTHRNLMTWGLATEAQLSQSTWLIAETFGQNQGKPFYQMGL 196 Query: 197 RATLVPEHVELDLTYGNTFGADTRGRYVVLGLRFIT 232 R LVP HV++D TYGN G+ T+ R+ +GLR ++ Sbjct: 197 RYWLVPGHVQIDATYGNRAGSSTQERWFSIGLRLLS 232 >ref|YP_004488306.1| hypothetical protein DelCs14_2941 [Delftia sp. Cs1-4] gb|AEF89951.1| hypothetical protein DelCs14_2941 [Delftia sp. Cs1-4] Length = 237 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 85/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%) Query: 21 AFAAGAMNVDDAQVLGANKCQLEAWGKFNRDGTERWLNPSCNLTGNLEVSWGNSWQRDGA 80 A AA M DDA+++ A CQLE+W K +D TE W P+CN TGNLE++ G + R+ Sbjct: 24 AHAARPMITDDARIVDAKSCQLESWAKSKKDSTEFWAQPACNFTGNLELTLGAARTREDG 83 Query: 81 GMYLANSQLQGKTVFREMSPDSYGVGMLAGVVRQTDSGDDGRQRSWNVYSKLLTSFSFKD 140 + +QGKT+F+E+ P+ +G G+ G R + D+G+ R ++Y+ + +FS + Sbjct: 84 SSRTTDVVIQGKTLFKELQPNGWGWGLAVGNARHPN--DEGQGRG-DLYAYVPVTFSLRG 140 Query: 141 DAVLLHTNLGAIRKGKEQTTRLTWGLGNETKLADRLSFIGEVFGENKGKPSYQAGVRATL 200 D + HTN+G +R + +TWGL E +L+ I E FG+N+GKP YQ G+R L Sbjct: 141 DRLFFHTNVGWLRTAQTHRNLMTWGLATEAQLSQSTWLIAETFGQNQGKPFYQMGLRYWL 200 Query: 201 VPEHVELDLTYGNTFGADTRGRYVVLGLRFIT 232 VP HV++D TYGN G+ T+ R+ +GLR ++ Sbjct: 201 VPGHVQIDATYGNRAGSSTQERWFSIGLRLLS 232 >ref|YP_004681700.1| hypothetical protein CNE_2c15050 [Cupriavidus necator N-1] gb|AEI80468.1| hypothetical protein CNE_2c15050 [Cupriavidus necator N-1] Length = 237 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 83/206 (40%), Positives = 121/206 (58%), Gaps = 2/206 (0%) Query: 30 DDAQVLGANKCQLEAWGKFNRDGTERWLNPSCNLTGNLEVSWGNSWQRDGAGMYLANSQL 89 DDA+++ CQLE+W +F G E W P CN TGNLE++ G S QR G+ N Q Sbjct: 32 DDARIVDPKSCQLESWMQFQSGGNELWALPGCNPTGNLELTLGGSLQRIDGGLDATNVQF 91 Query: 90 QGKTVFREMSPDSYGVGMLAGVVRQTDSGDDGRQRSWNVYSKLLTSFSFKDDAVLLHTNL 149 Q KT+ + + + YG+ + AG++ ++ + R+ N+Y + S SF DD + H N+ Sbjct: 92 QAKTLLKPLETNGYGIALSAGLIHHPNA--EQRKLFGNLYLNVPVSVSFADDRFVAHLNV 149 Query: 150 GAIRKGKEQTTRLTWGLGNETKLADRLSFIGEVFGENKGKPSYQAGVRATLVPEHVELDL 209 GA R + TR+TWG G ET L R+ + E FGEN+G P +QAG R +V + V++D Sbjct: 150 GANRDTENNQTRMTWGFGTETALHPRVFLVAETFGENRGNPLFQAGFRFWVVQDRVQVDT 209 Query: 210 TYGNTFGADTRGRYVVLGLRFITPEL 235 TYGN FG T R+ +GLR ++P Sbjct: 210 TYGNVFGGGTGARFFTIGLRLLSPAF 235 >ref|ZP_03541307.1| conserved hypothetical protein [Comamonas testosteroni KF-1] gb|EED65593.1| conserved hypothetical protein [Comamonas testosteroni KF-1] Length = 246 Score = 168 bits (425), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 92/230 (40%), Positives = 133/230 (57%), Gaps = 6/230 (2%) Query: 3 KHMMIATVAVHGLLGMQSAFAAGAMNVDDAQVLGANKCQLEAWGKFNRDGTERWLNPSCN 62 + M + T A+ L G SA AA MN DDA+++ A CQLE+W + + E W P+CN Sbjct: 18 RPMTLLTAAMAVLAG--SAHAARPMNTDDARIVDAKACQLESWVRHPKGHAEFWALPACN 75 Query: 63 LTGNLEVSWGNSWQRDGAGMYLANSQLQGKTVFREMSPDSYGVGMLAGVVRQTDSGDDGR 122 TGNLE++ G + R + +QGKT+F+ + + +GVG++ G+ R G Sbjct: 76 FTGNLELTMGGALTRMDGSTRASAQVIQGKTLFKPLETNGWGVGLVMGLARDPRRDAGGG 135 Query: 123 QRSWNVYSKLLTSFSFKDDAVLLHTNLGAIRKGKEQTTRLTWGLGNETKLADRLSFIGEV 182 + Y+ + SFSF DD V+LHTN+G R + R TWGLG+ET+L R I E Sbjct: 136 H---DTYAYVPASFSFLDDKVVLHTNVGWRRDQGVHSNRFTWGLGSETQLTGRTWLIAET 192 Query: 183 FGENKGKPSYQAGVRATLVPEHVELDLTYGNTFGADTRGRYVVLGLRFIT 232 +G G+P Q G+R LVP+ V++D TYGN FG D R++ +GLR +T Sbjct: 193 YGGGSGRPLAQVGLRHWLVPDRVQIDATYGNRFG-DGSQRWISVGLRLLT 241