BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0140.p (412 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774402.1| fosmidomycin resistance protein [Herbaspiril... 570 e-160 ref|ZP_07775761.1| fosmidomycin resistance protein [Pseudomonas ... 547 e-153 gb|ADX60323.1| fosmidomycin resistance protein [Pseudomonas fluo... 541 e-151 ref|YP_002873013.1| putative fosmidomycin resistance protein [Ps... 537 e-150 ref|YP_350485.1| major facilitator transporter [Pseudomonas fluo... 535 e-150 >ref|YP_003774402.1| fosmidomycin resistance protein [Herbaspirillum seropedicae SmR1] gb|ADJ62494.1| fosmidomycin resistance protein [Herbaspirillum seropedicae SmR1] Length = 413 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 313/414 (75%), Positives = 356/414 (85%), Gaps = 4/414 (0%) Query: 1 MTIQTSSPAVLSDAPAASAPAATQAG--SSPLVLRIVLAVGFAHLINDLIQALLPSIYPM 58 MT T+S A + A+ PA + AG + PLV+ I+LA G AHLIND+IQALLPSIYPM Sbjct: 1 MTSATNSTAAAPSS--ATTPANSPAGLAAQPLVMSIILACGGAHLINDMIQALLPSIYPM 58 Query: 59 LKQNYGLSFTQVGLITLTFQVTASLIQPWIGMYTDKHPKPLLLPCGALFTLLGIVLLSMA 118 LK +YGLSFTQVGLITLTFQVTASL+QPWIGMYTD+HP+P LLP GA+ TL+GIVLLSMA Sbjct: 59 LKTSYGLSFTQVGLITLTFQVTASLLQPWIGMYTDRHPQPWLLPSGAVATLVGIVLLSMA 118 Query: 119 GSFGWFLLAAGLIGVGSSTFHPEASRIARMASGGRFGFAQSTFQVGGNAGSALGPLLAAA 178 GSF FLLAA L+G+GSSTFHPEASRIARMASGGRFG AQSTFQVGGNAGSA GPLLAAA Sbjct: 119 GSFPAFLLAAALVGIGSSTFHPEASRIARMASGGRFGLAQSTFQVGGNAGSAFGPLLAAA 178 Query: 179 IVVPFGQPNIAWFCIFAVVAIVVLSRVSNWYRHHLAAGAKKARATVHHHLSSGTVKKALL 238 IVVPFGQ N+AWF + A+++I+VL+RVS WYR HLAA + + H L + TV++AL+ Sbjct: 179 IVVPFGQANVAWFVLLALLSILVLTRVSGWYRSHLAATKGRTKPRATHSLPAATVRRALV 238 Query: 239 VLALLVFSKYFYMAGFTSYFTFYLIDRFHLTVGDSQILLFLFLGAVAAGTFFGGPIGDKI 298 VLALLVFSKYFYMA FTSYFTFYLIDRFHL+V SQ+ LFLFLGAVA GTF GGPIGD+I Sbjct: 239 VLALLVFSKYFYMASFTSYFTFYLIDRFHLSVASSQLYLFLFLGAVAVGTFVGGPIGDRI 298 Query: 299 GRKRVIWFSILGAAPFALLLPHANLFWTGVLCVFVGFILASAFSAIVVYAQELVPGKVGL 358 GRK VIW SILGAAPFAL+LPHANLFWT VL V +G +++SAFSAIVVYAQELVPGKVG+ Sbjct: 299 GRKLVIWISILGAAPFALMLPHANLFWTAVLSVVIGLVISSAFSAIVVYAQELVPGKVGM 358 Query: 359 ISGVFFGLMFGFGGIGAALLGHLADLYGIANVYLLCSLLPLAGVLTVFLPDLKE 412 I+GVFFGLMFGFGGIGAALLGHLADLYGIA VY LC+ LPLAG+LTVFLPD++E Sbjct: 359 IAGVFFGLMFGFGGIGAALLGHLADLYGIAWVYGLCAFLPLAGILTVFLPDVRE 412 >ref|ZP_07775761.1| fosmidomycin resistance protein [Pseudomonas fluorescens WH6] gb|EFQ63490.1| fosmidomycin resistance protein [Pseudomonas fluorescens WH6] Length = 403 Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust. Identities = 282/411 (68%), Positives = 329/411 (80%), Gaps = 10/411 (2%) Query: 1 MTIQTSSPAVLSDAPAASAPAATQAGSSPLVLRIVLAVGFAHLINDLIQALLPSIYPMLK 60 M+ T+SPA + P S PLV+RI+ A AHLINDLIQA+LPSIYPMLK Sbjct: 1 MSTLTASPAAATSTPHVS----------PLVMRILGACALAHLINDLIQAVLPSIYPMLK 50 Query: 61 QNYGLSFTQVGLITLTFQVTASLIQPWIGMYTDKHPKPLLLPCGALFTLLGIVLLSMAGS 120 NYGL+FTQVG+ITLTFQ+TASL+QPWIG +TD+HPKP LLP G + TL+GI++L+ G+ Sbjct: 51 ANYGLTFTQVGMITLTFQLTASLLQPWIGYHTDRHPKPWLLPAGMVCTLVGILMLAFVGT 110 Query: 121 FGWFLLAAGLIGVGSSTFHPEASRIARMASGGRFGFAQSTFQVGGNAGSALGPLLAAAIV 180 F LLAAGL+GVGSSTFHPE SR+AR+ASGGR+G AQSTFQVGGN GSALGPLLAAAI+ Sbjct: 111 FPAILLAAGLVGVGSSTFHPETSRVARLASGGRYGLAQSTFQVGGNTGSALGPLLAAAII 170 Query: 181 VPFGQPNIAWFCIFAVVAIVVLSRVSNWYRHHLAAGAKKARATVHHHLSSGTVKKALLVL 240 +P+GQ NIAWF +FAV AI+VL +S WYR+HL K H LS G V AL+VL Sbjct: 171 IPYGQGNIAWFGLFAVFAILVLYGLSRWYRNHLNLFKLKQGGKATHGLSKGRVTFALVVL 230 Query: 241 ALLVFSKYFYMAGFTSYFTFYLIDRFHLTVGDSQILLFLFLGAVAAGTFFGGPIGDKIGR 300 A+LVFSKYFYM+ TSYFTFYLI++F L+V SQ+ LFLFLGAVAAGTFFGGPIGD+IGR Sbjct: 231 AVLVFSKYFYMSSLTSYFTFYLIEKFSLSVASSQLYLFLFLGAVAAGTFFGGPIGDRIGR 290 Query: 301 KRVIWFSILGAAPFALLLPHANLFWTGVLCVFVGFILASAFSAIVVYAQELVPGKVGLIS 360 K+VIWFSILGAAPF L LP+ +LFWT VL V +GFILASAFSAIVV+AQELVPG VG+I+ Sbjct: 291 KKVIWFSILGAAPFTLALPYVDLFWTAVLSVVIGFILASAFSAIVVFAQELVPGNVGMIA 350 Query: 361 GVFFGLMFGFGGIGAALLGHLADLYGIANVYLLCSLLPLAGVLTVFLPDLK 411 GVFFGLMFGF GIGAALLG LAD +GI VY LCS LPL G+LT+ LP K Sbjct: 351 GVFFGLMFGFSGIGAALLGLLADNHGIEYVYKLCSFLPLVGILTILLPSTK 401 >gb|ADX60323.1| fosmidomycin resistance protein [Pseudomonas fluorescens] Length = 405 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 293/412 (71%), Positives = 336/412 (81%), Gaps = 8/412 (1%) Query: 1 MTIQTSSPAVLSDAPAASAPAATQAGSSPLVLRIVLAVGFAHLINDLIQALLPSIYPMLK 60 M + S P+V A+ PAA Q +SPLV+R++ AV AHLINDLIQ++LPSIYPMLK Sbjct: 1 MALSNSQPSV------ATTPAAGQ--TSPLVMRVIGAVALAHLINDLIQSVLPSIYPMLK 52 Query: 61 QNYGLSFTQVGLITLTFQVTASLIQPWIGMYTDKHPKPLLLPCGALFTLLGIVLLSMAGS 120 NYGL+FTQVGLITLTFQ+TASL+QPW+G YTD+HPKP LLPCG + TL+GI+++S GS Sbjct: 53 ANYGLTFTQVGLITLTFQLTASLLQPWVGYYTDRHPKPYLLPCGMICTLVGILMMSQVGS 112 Query: 121 FGWFLLAAGLIGVGSSTFHPEASRIARMASGGRFGFAQSTFQVGGNAGSALGPLLAAAIV 180 F LLAAGLIG+GSSTFHPEASR+AR+ASGGR+G AQSTFQVGGNAGSA GPLLAAAI+ Sbjct: 113 FPLILLAAGLIGIGSSTFHPEASRVARLASGGRYGLAQSTFQVGGNAGSAFGPLLAAAII 172 Query: 181 VPFGQPNIAWFCIFAVVAIVVLSRVSNWYRHHLAAGAKKARATVHHHLSSGTVKKALLVL 240 +PFGQ N+AWF +FAV A+ VL +S WY HHL K H LS G V AL+VL Sbjct: 173 IPFGQGNVAWFGLFAVFALFVLYAISRWYAHHLNLFKLKQGQAATHGLSKGRVLSALVVL 232 Query: 241 ALLVFSKYFYMAGFTSYFTFYLIDRFHLTVGDSQILLFLFLGAVAAGTFFGGPIGDKIGR 300 LLVFSKYFYMA FTSYFTFYLI++F L+V SQ+ LFLFLGAVAAGTFFGGPIGDKIGR Sbjct: 233 GLLVFSKYFYMASFTSYFTFYLIEKFDLSVASSQLHLFLFLGAVAAGTFFGGPIGDKIGR 292 Query: 301 KRVIWFSILGAAPFALLLPHANLFWTGVLCVFVGFILASAFSAIVVYAQELVPGKVGLIS 360 K VIWFSILG APF LLLPH +LFWT +L V +GFILASAFSAIVVYAQELVPG VG+I+ Sbjct: 293 KAVIWFSILGVAPFTLLLPHVDLFWTSILSVVIGFILASAFSAIVVYAQELVPGNVGMIA 352 Query: 361 GVFFGLMFGFGGIGAALLGHLADLYGIANVYLLCSLLPLAGVLTVFLPDLKE 412 GVFFGLMFGFGGIGAALLGHLAD++GI VY LCS LPL GVL + LP K+ Sbjct: 353 GVFFGLMFGFGGIGAALLGHLADIHGIEYVYTLCSFLPLFGVLAILLPRTKK 404 >ref|YP_002873013.1| putative fosmidomycin resistance protein [Pseudomonas fluorescens SBW25] emb|CAY49670.1| putative fosmidomycin resistance protein [Pseudomonas fluorescens SBW25] Length = 403 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 274/384 (71%), Positives = 317/384 (82%) Query: 28 SPLVLRIVLAVGFAHLINDLIQALLPSIYPMLKQNYGLSFTQVGLITLTFQVTASLIQPW 87 SPLV+RI+ A AHLINDLIQA+LPSIYPMLK NYGLSFTQVGLITLTFQ+TASL+QPW Sbjct: 18 SPLVMRILGACALAHLINDLIQAVLPSIYPMLKANYGLSFTQVGLITLTFQLTASLLQPW 77 Query: 88 IGMYTDKHPKPLLLPCGALFTLLGIVLLSMAGSFGWFLLAAGLIGVGSSTFHPEASRIAR 147 IG +TD+HPKP LLP G + TL+GI++L+ G+F LLAAGL+GVGSSTFHPE SR+AR Sbjct: 78 IGYHTDRHPKPWLLPAGMVCTLIGILMLAFVGNFPAILLAAGLVGVGSSTFHPETSRVAR 137 Query: 148 MASGGRFGFAQSTFQVGGNAGSALGPLLAAAIVVPFGQPNIAWFCIFAVVAIVVLSRVSN 207 +ASGGR+G AQSTFQVGGN GSALGPLLAAAI++P+GQ +IAWF +FAV AI+VL +S Sbjct: 138 LASGGRYGLAQSTFQVGGNTGSALGPLLAAAIIIPYGQGHIAWFGLFAVFAILVLYGLSR 197 Query: 208 WYRHHLAAGAKKARATVHHHLSSGTVKKALLVLALLVFSKYFYMAGFTSYFTFYLIDRFH 267 WYR+HL K H LS G V AL+VLA+LVFSKY+YM TSYFTFYLI++F Sbjct: 198 WYRNHLNLFKLKQGGKATHGLSKGRVTFALVVLAVLVFSKYWYMTSLTSYFTFYLIEKFQ 257 Query: 268 LTVGDSQILLFLFLGAVAAGTFFGGPIGDKIGRKRVIWFSILGAAPFALLLPHANLFWTG 327 L+V SQ+ LFLFLGAVA GTF GGPIGDKIGRK+VIWFSILGAAPF L LP+ +LFWT Sbjct: 258 LSVSSSQMYLFLFLGAVAVGTFAGGPIGDKIGRKKVIWFSILGAAPFTLALPYVDLFWTA 317 Query: 328 VLCVFVGFILASAFSAIVVYAQELVPGKVGLISGVFFGLMFGFGGIGAALLGHLADLYGI 387 VL V +GFI+ASAFSAIVV+AQELVPG VG+I+G+FFGLMFGF GIGAALLG LAD +GI Sbjct: 318 VLSVVIGFIIASAFSAIVVFAQELVPGNVGMIAGIFFGLMFGFSGIGAALLGLLADTHGI 377 Query: 388 ANVYLLCSLLPLAGVLTVFLPDLK 411 VY LCS LPL G+LTV LP K Sbjct: 378 EYVYKLCSFLPLVGILTVLLPSTK 401 >ref|YP_350485.1| major facilitator transporter [Pseudomonas fluorescens Pf0-1] gb|ABA76494.1| putative fosmidomycin resistance protein [Pseudomonas fluorescens Pf0-1] Length = 405 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 288/383 (75%), Positives = 324/383 (84%) Query: 30 LVLRIVLAVGFAHLINDLIQALLPSIYPMLKQNYGLSFTQVGLITLTFQVTASLIQPWIG 89 LV+RI+ AV AHLINDLIQ++LPSIYPMLK NYGLSFTQVGLITLTFQ+TASL+QPW+G Sbjct: 22 LVMRIIGAVALAHLINDLIQSVLPSIYPMLKANYGLSFTQVGLITLTFQLTASLLQPWVG 81 Query: 90 MYTDKHPKPLLLPCGALFTLLGIVLLSMAGSFGWFLLAAGLIGVGSSTFHPEASRIARMA 149 +TD+HPKP LLP G++ TL+GIV++SM GSF LLAA LIG+GSSTFHPEASRIAR+A Sbjct: 82 YHTDRHPKPWLLPAGSVCTLIGIVMMSMVGSFPLILLAAALIGIGSSTFHPEASRIARLA 141 Query: 150 SGGRFGFAQSTFQVGGNAGSALGPLLAAAIVVPFGQPNIAWFCIFAVVAIVVLSRVSNWY 209 SGGRFG AQSTFQVGGNAGSA GPLLAAAI++PFGQ N+AWF +FAV A+ VL R+S WY Sbjct: 142 SGGRFGLAQSTFQVGGNAGSAFGPLLAAAIIIPFGQGNVAWFGLFAVFALFVLYRISRWY 201 Query: 210 RHHLAAGAKKARATVHHHLSSGTVKKALLVLALLVFSKYFYMAGFTSYFTFYLIDRFHLT 269 HHL KA H LS G V AL+VL LLVFSKYFYMA TSYFTFYLI++F L+ Sbjct: 202 AHHLNLFKLKAGQAATHGLSKGRVISALVVLGLLVFSKYFYMASLTSYFTFYLIEKFDLS 261 Query: 270 VGDSQILLFLFLGAVAAGTFFGGPIGDKIGRKRVIWFSILGAAPFALLLPHANLFWTGVL 329 V SQ+ LFLFLGAVAAGTFFGGPIGDKIGRK VIWFSILG APF LL+PH +LFWT VL Sbjct: 262 VASSQLHLFLFLGAVAAGTFFGGPIGDKIGRKAVIWFSILGVAPFTLLMPHVDLFWTSVL 321 Query: 330 CVFVGFILASAFSAIVVYAQELVPGKVGLISGVFFGLMFGFGGIGAALLGHLADLYGIAN 389 V +GFILASAFSAIVVYAQELVPG VG+I+GVFFGLMFGFGGIGAALLGHLAD++GI Sbjct: 322 SVVIGFILASAFSAIVVYAQELVPGNVGMIAGVFFGLMFGFGGIGAALLGHLADIHGIEY 381 Query: 390 VYLLCSLLPLAGVLTVFLPDLKE 412 VY LCS LPL GVLT+FLP K+ Sbjct: 382 VYFLCSFLPLFGVLTIFLPRTKK 404