BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0137.p (243 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003608247.1| cytochrome C biogenesis protein transmembran... 358 4e-97 ref|ZP_03269945.1| cytochrome c biogenesis protein transmembrane... 357 1e-96 ref|YP_001355018.1| cytochrome c-type biogenesis protein [Janthi... 265 3e-69 gb|EGP48202.1| cytochrome c-type biogenesis protein [Achromobact... 255 3e-66 gb|EFV84202.1| cytochrome c-type biogenesis protein [Achromobact... 254 8e-66 >ref|YP_003608247.1| cytochrome C biogenesis protein transmembrane region [Burkholderia sp. CCGE1002] gb|ADG18736.1| cytochrome c biogenesis protein transmembrane region [Burkholderia sp. CCGE1002] Length = 238 Score = 358 bits (919), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 185/239 (77%), Positives = 210/239 (87%), Gaps = 7/239 (2%) Query: 5 MHSFLETPFALLAGLLTIASPCVLPVLPILLGSAVTEPGKSPNRTRPLFIIAGFILSFSA 64 MHS LETP ALLAGLLTIASPCVLPV+PILLG++V + P+RTRPLFI+AGFIL+F++ Sbjct: 1 MHSTLETPLALLAGLLTIASPCVLPVMPILLGTSV----ERPSRTRPLFIVAGFILTFAS 56 Query: 65 FAMLLGAVSGTVHVAQEALRNTAIALLALSGLLRLWPRPYEWLVAHLQAPLQRMHAARGV 124 FA+LLGAVS TVHVAQ+ LRNT IALLALSGLLR+WPRPY+WLVA LQ PL R+ AA Sbjct: 57 FALLLGAVSSTVHVAQQVLRNTGIALLALSGLLRIWPRPYDWLVAQLQGPLDRIGAAMA- 115 Query: 125 PKVH--AGNTGGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLLLMYAIGAAI 182 P +GN GGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLL +YAIGAAI Sbjct: 116 PGTQPGSGNAGGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLLTLYAIGAAI 175 Query: 183 PMLAILYGGQYISRHVRMVSRHSQRLQQLFGVLVMLTALAIYLQYDVLISASLSSLFSS 241 PMLAI+YGG Y++RHVR+VSRH++RLQQ+FGVLVMLTALAIYLQYDVL+ A L+ LF S Sbjct: 176 PMLAIIYGGHYVTRHVRVVSRHAERLQQVFGVLVMLTALAIYLQYDVLLYARLAGLFPS 234 >ref|ZP_03269945.1| cytochrome c biogenesis protein transmembrane region [Burkholderia sp. H160] gb|EDZ98469.1| cytochrome c biogenesis protein transmembrane region [Burkholderia sp. H160] Length = 238 Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 185/239 (77%), Positives = 211/239 (88%), Gaps = 7/239 (2%) Query: 5 MHSFLETPFALLAGLLTIASPCVLPVLPILLGSAVTEPGKSPNRTRPLFIIAGFILSFSA 64 MHS LETP ALLAGLLTIASPCVLPV+PILLG++V +P +RTRPLFIIAGFIL+F++ Sbjct: 1 MHSTLETPLALLAGLLTIASPCVLPVMPILLGTSVEQP----SRTRPLFIIAGFILTFAS 56 Query: 65 FAMLLGAVSGTVHVAQEALRNTAIALLALSGLLRLWPRPYEWLVAHLQAPLQRMHA--AR 122 FA+LLGAVS TVHVAQ+ LRNT IALLALSGLLR+WPRPY+WLVA LQ PL R+ A A Sbjct: 57 FALLLGAVSSTVHVAQQVLRNTGIALLALSGLLRIWPRPYDWLVAQLQGPLDRIGAVIAP 116 Query: 123 GVPKVHAGNTGGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLLLMYAIGAAI 182 G + +GN GGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLL +YAIGAAI Sbjct: 117 GT-QPGSGNAGGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLLTLYAIGAAI 175 Query: 183 PMLAILYGGQYISRHVRMVSRHSQRLQQLFGVLVMLTALAIYLQYDVLISASLSSLFSS 241 PMLAI+YGG Y++RHVR+V+RH++RLQQ+FGVLVMLTALAIYLQYDVL+ A L+ LF S Sbjct: 176 PMLAIIYGGHYVTRHVRVVARHAERLQQVFGVLVMLTALAIYLQYDVLLYARLAGLFPS 234 >ref|YP_001355018.1| cytochrome c-type biogenesis protein [Janthinobacterium sp. Marseille] gb|ABR91053.1| cytochrome c-type biogenesis protein [Janthinobacterium sp. Marseille] Length = 235 Score = 265 bits (678), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 146/237 (61%), Positives = 188/237 (79%), Gaps = 6/237 (2%) Query: 5 MHSFLETPFALLAGLLTIASPCVLPVLPILLGSAVTEPGKSPNRTRPLFIIAGFILSFSA 64 M++ +E PFALLAG+LTIASPCVLP+LPI+LG+++ GK RPLFI+AGF+LSF+A Sbjct: 1 MNNLIEAPFALLAGVLTIASPCVLPILPIILGTSIKRAGK----LRPLFIVAGFVLSFAA 56 Query: 65 FAMLLGAVSGTVHVAQEALRNTAIALLALSGLLRLWPRPYEWLVAHLQAPLQRMHAARGV 124 MLL +VS +V VA E LR I LL L+GL LW RPYEWL++HL PL R+ ++ Sbjct: 57 LGMLLASVSQSVAVAHETLRLAGIGLLLLAGLAMLWRRPYEWLISHLSGPLDRIGSS--G 114 Query: 125 PKVHAGNTGGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLLLMYAIGAAIPM 184 +GN GGFVLGMSLGA+WTPCAGPVLASILVLV +AQ+LGWSA LL++YAIGA IPM Sbjct: 115 GNAGSGNLGGFVLGMSLGAIWTPCAGPVLASILVLVAQAQNLGWSASLLILYAIGAGIPM 174 Query: 185 LAILYGGQYISRHVRMVSRHSQRLQQLFGVLVMLTALAIYLQYDVLISASLSSLFSS 241 LAI YGGQ+++ VR V+++++RLQ++FGVL++LTA+AIY QYDV+I A +S LF + Sbjct: 175 LAIAYGGQFMTTRVRAVAKYAERLQKIFGVLIVLTAIAIYFQYDVVIYAWISDLFPN 231 >gb|EGP48202.1| cytochrome c-type biogenesis protein [Achromobacter xylosoxidans AXX-A] Length = 230 Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 134/236 (56%), Positives = 173/236 (73%), Gaps = 6/236 (2%) Query: 5 MHSFLETPFALLAGLLTIASPCVLPVLPILLGSAVTEPGKSPNRTRPLFIIAGFILSFSA 64 M ++++TP AL AG+LT+ASPCVLP+LPILLGSAV G R RPLFI+ GF+ +FS Sbjct: 1 MTTYIDTPLALAAGMLTVASPCVLPLLPILLGSAVERAG----RLRPLFIVLGFVAAFSG 56 Query: 65 FAMLLGAVSGTVHVAQEALRNTAIALLALSGLLRLWPRPYEWLVAHLQAPLQRMHAARGV 124 + L +SG V A EA+R+ ++A LAL GL R+WPRPY+WL A L PLQ + Sbjct: 57 LGIALSLLSGAVESAHEAVRSVSVAALALFGLARIWPRPYDWLAARLSGPLQGVIGLG-- 114 Query: 125 PKVHAGNTGGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLLLMYAIGAAIPM 184 K +GN GGF+LGMSLGAVWTPCAGPVLASIL+L +A +L S+LLLL+Y +GA IPM Sbjct: 115 DKGGSGNAGGFLLGMSLGAVWTPCAGPVLASILILAARADNLAHSSLLLLVYGLGAGIPM 174 Query: 185 LAILYGGQYISRHVRMVSRHSQRLQQLFGVLVMLTALAIYLQYDVLISASLSSLFS 240 LAI YGG + +R V ++RH+ RLQ+ FGVL++ +A+AI+ QYDVL A +S LFS Sbjct: 175 LAIAYGGGFAARRVGAIARHAVRLQRAFGVLLVASAIAIHFQYDVLAYAWISRLFS 230 >gb|EFV84202.1| cytochrome c-type biogenesis protein [Achromobacter xylosoxidans C54] Length = 230 Score = 254 bits (649), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 136/238 (57%), Positives = 174/238 (73%), Gaps = 10/238 (4%) Query: 5 MHSFLETPFALLAGLLTIASPCVLPVLPILLGSAVTEPGKSPNRTRPLFIIAGFILSFSA 64 M + ++TP AL AG+LT+ASPCVLP+LPILLGSAV G R RPL I+ GF+L+FS Sbjct: 1 MTTLIDTPLALAAGMLTVASPCVLPLLPILLGSAVERAG----RLRPLCIVLGFVLAFSG 56 Query: 65 FAMLLGAVSGTVHVAQEALRNTAIALLALSGLLRLWPRPYEWLVAHLQAPLQRM--HAAR 122 + L +SG V A EA+R+ ++A LAL GL R+WPRPY+WL A L PLQ + AR Sbjct: 57 LGIALSLLSGAVESAHEAVRSVSVAALALFGLARIWPRPYDWLAARLSGPLQGVIGLGAR 116 Query: 123 GVPKVHAGNTGGFVLGMSLGAVWTPCAGPVLASILVLVVKAQDLGWSALLLLMYAIGAAI 182 G +GN GGF+LGMSLGAVWTPCAGPVLASIL+L +AQDL S+LLLL+Y +GA I Sbjct: 117 G----GSGNAGGFLLGMSLGAVWTPCAGPVLASILILAARAQDLAHSSLLLLVYGLGAGI 172 Query: 183 PMLAILYGGQYISRHVRMVSRHSQRLQQLFGVLVMLTALAIYLQYDVLISASLSSLFS 240 PML I YGG + +R V ++RH+ RLQ+ FGVL++ +A+AI+ QYDVL A +S LF+ Sbjct: 173 PMLVIAYGGGFAARRVGAIARHAVRLQRAFGVLLVASAIAIHFQYDVLAYAWISRLFA 230