BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0132.p (568 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774686.1| methyl-accepting chemotaxis protein I [Herba... 621 e-175 ref|YP_003776428.1| methyl-accepting chemotaxis transducer trans... 576 e-162 ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer ... 557 e-156 ref|YP_001351773.1| methyl-accepting chemotaxis protein [Janthin... 557 e-156 ref|YP_587740.1| methyl-accepting chemotaxis protein [Cupriavidu... 550 e-154 >ref|YP_003774686.1| methyl-accepting chemotaxis protein I [Herbaspirillum seropedicae SmR1] gb|ADJ62778.1| methyl-accepting chemotaxis protein I [Herbaspirillum seropedicae SmR1] Length = 541 Score = 621 bits (1602), Expect = e-175, Method: Compositional matrix adjust. Identities = 350/487 (71%), Positives = 400/487 (82%), Gaps = 3/487 (0%) Query: 1 MNFFANMNISKRLNLGFAIILFSAIAVIALSIWRLHEVAETTQSMMEKPLAKERLVSDWY 60 M +FANM I +RL LGFA+IL +A V+ALSIWRL +A T MM +PL KERLVSDWY Sbjct: 1 MRYFANMKIGRRLALGFAVILAAASVVVALSIWRLQGIAAATDEMMHEPLTKERLVSDWY 60 Query: 61 RTIHTSVRRTTAIAKSSDPSLSAFFAEDAATATKLSNEQQKTLEGLLGSDKEKALFAQLA 120 RTIHTSVRRTTAIAKSSDPSL+AFFA+DAA A+++S EQQK +E L+ SD+EKA+F +L Sbjct: 61 RTIHTSVRRTTAIAKSSDPSLAAFFADDAAAASRMSTEQQKAIEALIESDQEKAVFTKLG 120 Query: 121 TVRKSYIVARDAISKAKADGNVEEAARILAKDFPVAAKGYLDALQQLLDLQRSGIDEIAA 180 VRK YI RDAISKAKA+G EEAA+ILA F VA KGYLD LQQLL LQR+ ID++AA Sbjct: 121 EVRKDYIKYRDAISKAKAEGRTEEAAQILAGPFDVAGKGYLDLLQQLLTLQRANIDQVAA 180 Query: 181 SIQDQYKQSRNLLIAFGALLFVAGWVFAWRLALSIIRPLKQALGIAETVAAGDLSSRID- 239 IQ Y++SRNL++A L V GW+FA LAL I RPL+QA+ +AE VAAGDL+ RID Sbjct: 181 HIQTVYRESRNLMLALAFLQVVLGWLFARTLALGITRPLEQAVEVAEAVAAGDLTHRIDE 240 Query: 240 --TSRKDETGKLLLALKTMNDNLQRIVGQVRTGTDTISTASAEIASGNMDLSTRTEQQAG 297 +R DETGKL+ AL M NL RIVGQVR GTD I+TAS EIA+GN+DLS RTE+QAG Sbjct: 241 RLAARGDETGKLMHALHAMTGNLARIVGQVRGGTDAIATASKEIATGNLDLSARTERQAG 300 Query: 298 SLEETASAMEQLTSTVKQNADNARQANQLAVSASEVAVQGGSVVGQVVDTMGAINASSKK 357 +LEETASAME+LTSTV QNADNARQANQLA SAS VA QGG VV QV+ TMG+IN SS+K Sbjct: 301 ALEETASAMEELTSTVSQNADNARQANQLAASASSVAQQGGEVVSQVISTMGSINESSRK 360 Query: 358 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKEL 417 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIK L Sbjct: 361 IVDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKAL 420 Query: 418 ISDSVDKVDSGSKLVEQAGATMAEVVASVKRVTDIVGEISSASQEQSEGIEQVNRAIAQM 477 I DSV KV SGS+LV +AG+TM EVVASV++V DIV EIS+AS EQS+GI QVN AI M Sbjct: 421 IDDSVAKVGSGSELVTRAGSTMDEVVASVRQVADIVSEISAASSEQSDGISQVNLAITDM 480 Query: 478 DETTQQN 484 D+TTQQN Sbjct: 481 DQTTQQN 487 >ref|YP_003776428.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64520.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 536 Score = 576 bits (1485), Expect = e-162, Method: Compositional matrix adjust. Identities = 305/484 (63%), Positives = 373/484 (77%) Query: 1 MNFFANMNISKRLNLGFAIILFSAIAVIALSIWRLHEVAETTQSMMEKPLAKERLVSDWY 60 MN NMNI +RL LGFA+IL +I + + +WRL VA+ T+ MM +PL ERL++DWY Sbjct: 1 MNIIGNMNIGRRLTLGFALILTFSIIIAGIGLWRLDHVAQATREMMAEPLKTERLMADWY 60 Query: 61 RTIHTSVRRTTAIAKSSDPSLSAFFAEDAATATKLSNEQQKTLEGLLGSDKEKALFAQLA 120 + +RRT AIAKSSDP+L +FA + A ++K S E QK +E LL + +EKALF ++ Sbjct: 61 TNLVAGIRRTIAIAKSSDPALGPYFAAEVAASSKSSGEYQKQVEALLSTPEEKALFQKIG 120 Query: 121 TVRKSYIVARDAISKAKADGNVEEAARILAKDFPVAAKGYLDALQQLLDLQRSGIDEIAA 180 +RK Y+ +RD I+KAKA GN EEA RIL + F A Y D +++L+D QR +D+ A Sbjct: 121 ELRKLYLSSRDEINKAKAAGNTEEAMRILDQVFVPNATAYQDTMRKLVDFQRKEMDDTAR 180 Query: 181 SIQDQYKQSRNLLIAFGALLFVAGWVFAWRLALSIIRPLKQALGIAETVAAGDLSSRIDT 240 I +SR L++ L+ + G VFA L L I +PL +A+ ++ VA GDLSS I Sbjct: 181 EIDAIAAKSRTLILVLEGLILLLGIVFARYLTLGITKPLHRAVDVSRCVAEGDLSSEIAV 240 Query: 241 SRKDETGKLLLALKTMNDNLQRIVGQVRTGTDTISTASAEIASGNMDLSTRTEQQAGSLE 300 + +DETG+LL +LK MN +L+ IV VR+GTDTISTAS+EIA+GN+DLS+RTEQQA SL Sbjct: 241 TSRDETGQLLQSLKDMNQSLRGIVSNVRSGTDTISTASSEIAAGNLDLSSRTEQQASSLA 300 Query: 301 ETASAMEQLTSTVKQNADNARQANQLAVSASEVAVQGGSVVGQVVDTMGAINASSKKIVD 360 ETASAME+L STV+QNADNARQA+QLA SAS VA QGG VV QVVDTMGAINASS+KIVD Sbjct: 301 ETASAMEELISTVRQNADNARQASQLANSASAVAEQGGGVVSQVVDTMGAINASSRKIVD 360 Query: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELISD 420 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVR+LAQRSASAAKEIKELI+D Sbjct: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSASAAKEIKELIND 420 Query: 421 SVDKVDSGSKLVEQAGATMAEVVASVKRVTDIVGEISSASQEQSEGIEQVNRAIAQMDET 480 SV KVD GS+LVEQAG TM EVV+SV+RVTDIV EIS+AS EQ+ GIEQ+N AI QMD+ Sbjct: 421 SVGKVDDGSRLVEQAGNTMQEVVSSVRRVTDIVAEISAASTEQTHGIEQINLAITQMDQV 480 Query: 481 TQQN 484 TQQN Sbjct: 481 TQQN 484 >ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD69948.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 583 Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust. Identities = 290/494 (58%), Positives = 367/494 (74%) Query: 1 MNFFANMNISKRLNLGFAIILFSAIAVIALSIWRLHEVAETTQSMMEKPLAKERLVSDWY 60 M FA+M I KRL GFA++L A+ + + +W+L+ + T+ M +PLAKERL+SDW Sbjct: 1 MKIFASMKIGKRLGFGFAVVLAFAVLITGIGVWQLNALGNATREMTREPLAKERLISDWS 60 Query: 61 RTIHTSVRRTTAIAKSSDPSLSAFFAEDAATATKLSNEQQKTLEGLLGSDKEKALFAQLA 120 R I+ +V RTTA+AKSSDPSL FF+ +AA TK ++ K +E LL S +EK LF++++ Sbjct: 61 RNINVAVIRTTAVAKSSDPSLVPFFSTNAAEITKSTSALLKQIEPLLSSQEEKDLFSKVS 120 Query: 121 TVRKSYIVARDAISKAKADGNVEEAARILAKDFPVAAKGYLDALQQLLDLQRSGIDEIAA 180 VRK+Y+ +RD ++K KADG +EA R+L + AA Y+ + + L LQR +D A Sbjct: 121 DVRKAYLSSRDQVTKLKADGQADEANRLLESTYIPAADNYMKLVSEFLGLQRKNLDAKAV 180 Query: 181 SIQDQYKQSRNLLIAFGALLFVAGWVFAWRLALSIIRPLKQALGIAETVAAGDLSSRIDT 240 I SRN L+A AL+ G + AW L + I PL A+ +A VA GDL++ I T Sbjct: 181 EISGIETTSRNYLVALAALVLTFGVICAWLLTVGITGPLTNAVAVARRVADGDLATDIQT 240 Query: 241 SRKDETGKLLLALKTMNDNLQRIVGQVRTGTDTISTASAEIASGNMDLSTRTEQQAGSLE 300 KDET +LL AL M DNL RIVG VR G++ ++TASAEIA GN DLS RTEQQA +LE Sbjct: 241 EGKDETAQLLQALSAMKDNLARIVGNVRQGSEGVATASAEIAQGNNDLSARTEQQASALE 300 Query: 301 ETASAMEQLTSTVKQNADNARQANQLAVSASEVAVQGGSVVGQVVDTMGAINASSKKIVD 360 ETA++ME+L++TV+QNADNARQANQLA SAS VA++GG VV +VV+TM IN SSKKI D Sbjct: 301 ETAASMEELSATVRQNADNARQANQLAQSASTVAIKGGEVVSRVVETMKGINDSSKKISD 360 Query: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELISD 420 II VIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLA RSA AAKEIK LI+D Sbjct: 361 IIQVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAGRSADAAKEIKGLIND 420 Query: 421 SVDKVDSGSKLVEQAGATMAEVVASVKRVTDIVGEISSASQEQSEGIEQVNRAIAQMDET 480 SV +V+ GS LV+QAG TM EVV+S++RVTDI+GEIS+AS EQS+G+ QV+ A+ QMD+ Sbjct: 421 SVQRVEQGSTLVDQAGVTMTEVVSSIRRVTDIMGEISAASTEQSQGVAQVSEAVTQMDQV 480 Query: 481 TQQNAALVEQAAAA 494 TQQNAALVE+ AAA Sbjct: 481 TQQNAALVEEMAAA 494 >ref|YP_001351773.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR89417.1| methyl-accepting chemotaxis protein [Janthinobacterium sp. Marseille] Length = 566 Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust. Identities = 295/488 (60%), Positives = 366/488 (75%) Query: 1 MNFFANMNISKRLNLGFAIILFSAIAVIALSIWRLHEVAETTQSMMEKPLAKERLVSDWY 60 M FF+NM I RL LGF ++L +IA+ A I +LH V+ T+SM+E P+AKER+VSDW Sbjct: 1 MIFFSNMKIGARLMLGFGVVLALSIAIAADGIRQLHAVSAITRSMLELPIAKERMVSDWA 60 Query: 61 RTIHTSVRRTTAIAKSSDPSLSAFFAEDAATATKLSNEQQKTLEGLLGSDKEKALFAQLA 120 S+ RT +AKS+DP+L+ F A+ AA +K S E + LE LL +D+EK L+A++ Sbjct: 61 AITKASIARTIGVAKSADPALAQFSAKFAADDSKQSMEIIQKLEPLLNTDQEKELYAKIL 120 Query: 121 TVRKSYIVARDAISKAKADGNVEEAARILAKDFPVAAKGYLDALQQLLDLQRSGIDEIAA 180 VRKS++ R+ + K K +G EAA+ F AA + + + ++L+R +D A Sbjct: 121 DVRKSFLAGREGVMKLKTEGKEAEAAKYFDTTFLPAADSFKNHFTEFVELERKQMDAGTA 180 Query: 181 SIQDQYKQSRNLLIAFGALLFVAGWVFAWRLALSIIRPLKQALGIAETVAAGDLSSRIDT 240 + D S L+ A++ G AWRL + I RPLK A+ A VA GDL++ I Sbjct: 181 QLSDVEAASTRQLMLLSAMVLAFGIFCAWRLTIGITRPLKTAVDAARRVAGGDLTNDIKA 240 Query: 241 SRKDETGKLLLALKTMNDNLQRIVGQVRTGTDTISTASAEIASGNMDLSTRTEQQAGSLE 300 KDE G+LL ALK MND LQRIVG+VR GT+TI+TAS EIA+GN+DLS+RTEQQA SLE Sbjct: 241 ESKDECGQLLAALKDMNDGLQRIVGEVRLGTETITTASNEIAAGNLDLSSRTEQQASSLE 300 Query: 301 ETASAMEQLTSTVKQNADNARQANQLAVSASEVAVQGGSVVGQVVDTMGAINASSKKIVD 360 ETAS+ME+LTSTVKQNADNARQANQLAVSASEVA++GG VV QVV TM +IN SS+KIVD Sbjct: 301 ETASSMEELTSTVKQNADNARQANQLAVSASEVALKGGDVVSQVVQTMSSINESSRKIVD 360 Query: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELISD 420 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVA+EVRSLAQRSASAAKEIK LI D Sbjct: 361 IISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVATEVRSLAQRSASAAKEIKALIGD 420 Query: 421 SVDKVDSGSKLVEQAGATMAEVVASVKRVTDIVGEISSASQEQSEGIEQVNRAIAQMDET 480 SV KVD+G+KLV +AGATM E+V S++RVTDI+GEI++ASQEQS GIEQ+N+AI QMD Sbjct: 421 SVGKVDTGNKLVAEAGATMDEIVNSIRRVTDIMGEITAASQEQSAGIEQINQAIGQMDHV 480 Query: 481 TQQNAALV 488 TQQNA+LV Sbjct: 481 TQQNASLV 488 >ref|YP_587740.1| methyl-accepting chemotaxis protein [Cupriavidus metallidurans CH34] gb|ABF12471.1| Methyl-accepting chemotaxis protein II (MCP-II) (Aspartate chemoreceptor protein) [Cupriavidus metallidurans CH34] Length = 513 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 281/479 (58%), Positives = 360/479 (75%) Query: 6 NMNISKRLNLGFAIILFSAIAVIALSIWRLHEVAETTQSMMEKPLAKERLVSDWYRTIHT 65 N+ I RL +GF ++L + + L + RL +VA T +MM++PLAKER+VSDWYR ++ Sbjct: 3 NLGIGVRLGIGFGVVLLLSTFMTVLGVVRLEDVAGRTHAMMQQPLAKERIVSDWYRLMYA 62 Query: 66 SVRRTTAIAKSSDPSLSAFFAEDAATATKLSNEQQKTLEGLLGSDKEKALFAQLATVRKS 125 SVRRTTAI +SSDPSL FFA + T+ + + ++ +L SD EKA F ++ VR Sbjct: 63 SVRRTTAITRSSDPSLGQFFAAETKTSAETIAAMRDKIKPMLTSDAEKAAFERILVVRNP 122 Query: 126 YIVARDAISKAKADGNVEEAARILAKDFPVAAKGYLDALQQLLDLQRSGIDEIAASIQDQ 185 Y +RD I+K K DG E+A ++L +F A YL +Q+LLD+QR+ ID A I Sbjct: 123 YNESRDKIAKLKQDGQAEDAIKVLETEFVPAGDAYLVEIQKLLDIQRTSIDATAEEINRI 182 Query: 186 YKQSRNLLIAFGALLFVAGWVFAWRLALSIIRPLKQALGIAETVAAGDLSSRIDTSRKDE 245 Y+ +RN LIA G + G FAW L + I RPL +A+G A TVAAGDL+ RID +DE Sbjct: 183 YESARNGLIALGVIALAIGVAFAWWLTIGITRPLHRAVGFARTVAAGDLTGRIDVDSRDE 242 Query: 246 TGKLLLALKTMNDNLQRIVGQVRTGTDTISTASAEIASGNMDLSTRTEQQAGSLEETASA 305 TG+LL AL+ MN+N+ IV +VR GT+ I+T +++IA+GN DLS RTE+QA SL+ETAS+ Sbjct: 243 TGQLLAALREMNENILGIVKEVRKGTEAIATGTSQIAAGNTDLSQRTEEQASSLQETASS 302 Query: 306 MEQLTSTVKQNADNARQANQLAVSASEVAVQGGSVVGQVVDTMGAINASSKKIVDIISVI 365 ME+LTS V+QNAD+A+QA+ LAV+AS+VA QGG VVGQVV TM INA+S+K+V+IISVI Sbjct: 303 MEELTSIVRQNADSAKQASGLAVNASDVATQGGEVVGQVVHTMDEINAASRKVVEIISVI 362 Query: 366 DGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSASAAKEIKELISDSVDKV 425 +GIAFQTNILALNAAVEAARAGEQGRGFAVVA EVRSLAQRSA+AAKEIK LI DS D+V Sbjct: 363 EGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSATAAKEIKSLIGDSADRV 422 Query: 426 DSGSKLVEQAGATMAEVVASVKRVTDIVGEISSASQEQSEGIEQVNRAIAQMDETTQQN 484 + GS+LV QAG TM E+V++VKRVTDI+GEIS+AS EQS GIEQVN+A+ QMD TQQN Sbjct: 423 ERGSQLVAQAGQTMEEIVSAVKRVTDIMGEISAASVEQSAGIEQVNQAVTQMDTVTQQN 481