BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0127.p (271 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer ... 188 8e-46 ref|YP_003776428.1| methyl-accepting chemotaxis transducer trans... 179 4e-43 ref|YP_002008280.1| chemotaxis sensory transducer protein [Cupri... 178 9e-43 ref|ZP_04765383.1| methyl-accepting chemotaxis sensory transduce... 173 2e-41 ref|YP_587740.1| methyl-accepting chemotaxis protein [Cupriavidu... 171 9e-41 >ref|YP_523479.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] gb|ABD69948.1| methyl-accepting chemotaxis sensory transducer [Rhodoferax ferrireducens T118] Length = 583 Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 95/203 (46%), Positives = 132/203 (65%) Query: 2 TAIAKSTDPALAPFFAKEDAASSKISTELLKKLQPILESEQELTLFKKIETQRSLYVAAR 61 TA+AKS+DP+L PFF+ A +K ++ LLK+++P+L S++E LF K+ R Y+++R Sbjct: 71 TAVAKSSDPSLVPFFSTNAAEITKSTSALLKQIEPLLSSQEEKDLFSKVSDVRKAYLSSR 130 Query: 62 DQMRKAKAAGDLDEANRLLESAFMPRANDLKDALQNLLTMQRKSIDDTATDIERMAQTGR 121 DQ+ K KA G DEANRLLES ++P A++ + L +QRK++D A +I + T R Sbjct: 131 DQVTKLKADGQADEANRLLESTYIPAADNYMKLVSEFLGLQRKNLDAKAVEISGIETTSR 190 Query: 122 TLLIVLGVLILLFGVSSAWYLTVNITRPLTVAVGVARSIADGDLTAHIEVRSKDEVGMLL 181 L+ L L+L FGV AW LTV IT PLT AV VAR +ADGDL I+ KDE LL Sbjct: 191 NYLVALAALVLTFGVICAWLLTVGITGPLTNAVAVARRVADGDLATDIQTEGKDETAQLL 250 Query: 182 SALKDMNGSLLKIVGDVRGGTDA 204 AL M +L +IVG+VR G++ Sbjct: 251 QALSAMKDNLARIVGNVRQGSEG 273 >ref|YP_003776428.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64520.1| methyl-accepting chemotaxis transducer transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 536 Score = 179 bits (454), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 104/201 (51%), Positives = 144/201 (71%) Query: 3 AIAKSTDPALAPFFAKEDAASSKISTELLKKLQPILESEQELTLFKKIETQRSLYVAARD 62 AIAKS+DPAL P+FA E AASSK S E K+++ +L + +E LF+KI R LY+++RD Sbjct: 72 AIAKSSDPALGPYFAAEVAASSKSSGEYQKQVEALLSTPEEKALFQKIGELRKLYLSSRD 131 Query: 63 QMRKAKAAGDLDEANRLLESAFMPRANDLKDALQNLLTMQRKSIDDTATDIERMAQTGRT 122 ++ KAKAAG+ +EA R+L+ F+P A +D ++ L+ QRK +DDTA +I+ +A RT Sbjct: 132 EINKAKAAGNTEEAMRILDQVFVPNATAYQDTMRKLVDFQRKEMDDTAREIDAIAAKSRT 191 Query: 123 LLIVLGVLILLFGVSSAWYLTVNITRPLTVAVGVARSIADGDLTAHIEVRSKDEVGMLLS 182 L++VL LILL G+ A YLT+ IT+PL AV V+R +A+GDL++ I V S+DE G LL Sbjct: 192 LILVLEGLILLLGIVFARYLTLGITKPLHRAVDVSRCVAEGDLSSEIAVTSRDETGQLLQ 251 Query: 183 ALKDMNGSLLKIVGDVRGGTD 203 +LKDMN SL IV +VR GTD Sbjct: 252 SLKDMNQSLRGIVSNVRSGTD 272 >ref|YP_002008280.1| chemotaxis sensory transducer protein [Cupriavidus taiwanensis LMG 19424] emb|CAQ72226.1| chemotaxis sensory transducer protein [Cupriavidus taiwanensis LMG 19424] Length = 496 Score = 178 bits (451), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 97/203 (47%), Positives = 133/203 (65%) Query: 2 TAIAKSTDPALAPFFAKEDAASSKISTELLKKLQPILESEQELTLFKKIETQRSLYVAAR 61 TA+A+S DP+L FFA E AS + +L KLQP+L SEQE F+KI + R Y R Sbjct: 51 TAVARSADPSLGQFFAAETKASIEGIAQLRDKLQPMLSSEQEKAAFQKILSVRDPYNNGR 110 Query: 62 DQMRKAKAAGDLDEANRLLESAFMPRANDLKDALQNLLTMQRKSIDDTATDIERMAQTGR 121 D++ + K G +EAN++LE F+P + +Q LL +QR SID TA +I + R Sbjct: 111 DKITRLKQEGLTEEANQVLEKEFVPAGDAYLAEIQKLLDIQRASIDATAREINAIYVNAR 170 Query: 122 TLLIVLGVLILLFGVSSAWYLTVNITRPLTVAVGVARSIADGDLTAHIEVRSKDEVGMLL 181 LI LGV++L G++ A++LT+ ITRPL AV VAR++A GDLT+ IEV S+DE G LL Sbjct: 171 NSLIGLGVVVLGIGIAFAFWLTIGITRPLHRAVAVARTVASGDLTSRIEVDSRDETGQLL 230 Query: 182 SALKDMNGSLLKIVGDVRGGTDA 204 AL DMN ++L+IV VR GT++ Sbjct: 231 QALADMNANILRIVRQVRAGTES 253 >ref|ZP_04765383.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] gb|EER57813.1| methyl-accepting chemotaxis sensory transducer [Acidovorax delafieldii 2AN] Length = 527 Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/203 (46%), Positives = 132/203 (65%) Query: 2 TAIAKSTDPALAPFFAKEDAASSKISTELLKKLQPILESEQELTLFKKIETQRSLYVAAR 61 TAI KSTDP+LA FFA++ A S++ S +L +++P+L + E L+ I+ R Y+++R Sbjct: 68 TAIVKSTDPSLAGFFAEDAAMSTRESGKLQDRIEPLLSNPAEKELWVTIKKARVTYLSSR 127 Query: 62 DQMRKAKAAGDLDEANRLLESAFMPRANDLKDALQNLLTMQRKSIDDTATDIERMAQTGR 121 DQ KAKA G L+EA R L ++P A +Q LL +QR SID TA DI+ + R Sbjct: 128 DQAVKAKADGQLEEAERTLTQVYLPAAEKYMALIQQLLDLQRASIDATAKDIQGVYAESR 187 Query: 122 TLLIVLGVLILLFGVSSAWYLTVNITRPLTVAVGVARSIADGDLTAHIEVRSKDEVGMLL 181 L++L VL + G AW+LT ITRPL+ AV VAR++AD DLT +EV S+DE G L+ Sbjct: 188 MWLMLLCVLAVAVGGVCAWWLTHGITRPLSEAVRVARAVADNDLTTTVEVHSRDETGQLM 247 Query: 182 SALKDMNGSLLKIVGDVRGGTDA 204 AL+ MN SL ++VG VR GT+ Sbjct: 248 EALQHMNTSLAQVVGRVRAGTEG 270 >ref|YP_587740.1| methyl-accepting chemotaxis protein [Cupriavidus metallidurans CH34] gb|ABF12471.1| Methyl-accepting chemotaxis protein II (MCP-II) (Aspartate chemoreceptor protein) [Cupriavidus metallidurans CH34] Length = 513 Score = 171 bits (434), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 91/203 (44%), Positives = 135/203 (66%) Query: 2 TAIAKSTDPALAPFFAKEDAASSKISTELLKKLQPILESEQELTLFKKIETQRSLYVAAR 61 TAI +S+DP+L FFA E S++ + K++P+L S+ E F++I R+ Y +R Sbjct: 68 TAITRSSDPSLGQFFAAETKTSAETIAAMRDKIKPMLTSDAEKAAFERILVVRNPYNESR 127 Query: 62 DQMRKAKAAGDLDEANRLLESAFMPRANDLKDALQNLLTMQRKSIDDTATDIERMAQTGR 121 D++ K K G ++A ++LE+ F+P + +Q LL +QR SID TA +I R+ ++ R Sbjct: 128 DKIAKLKQDGQAEDAIKVLETEFVPAGDAYLVEIQKLLDIQRTSIDATAEEINRIYESAR 187 Query: 122 TLLIVLGVLILLFGVSSAWYLTVNITRPLTVAVGVARSIADGDLTAHIEVRSKDEVGMLL 181 LI LGV+ L GV+ AW+LT+ ITRPL AVG AR++A GDLT I+V S+DE G LL Sbjct: 188 NGLIALGVIALAIGVAFAWWLTIGITRPLHRAVGFARTVAAGDLTGRIDVDSRDETGQLL 247 Query: 182 SALKDMNGSLLKIVGDVRGGTDA 204 +AL++MN ++L IV +VR GT+A Sbjct: 248 AALREMNENILGIVKEVRKGTEA 270