BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0117.p (222 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05638270.1| GntR family transcriptional regulator [Pseudo... 253 1e-65 ref|YP_001861914.1| GntR family transcriptional regulator [Burkh... 243 2e-62 ref|YP_003907320.1| GntR family transcriptional regulator [Burkh... 243 2e-62 ref|ZP_02886208.1| transcriptional regulator, GntR family [Burkh... 238 3e-61 ref|ZP_06839413.1| transcriptional regulator, GntR family [Burkh... 230 1e-58 >ref|ZP_05638270.1| GntR family transcriptional regulator [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH88357.1| GntR family transcriptional regulator [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 226 Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 127/212 (59%), Positives = 165/212 (77%) Query: 1 LRSQVENYLREAIMNGRFKPGEKLSERELCELLDVSRPSLREALRKLEAEKLITMVLHRG 60 LR VE +LREAIMNGRF PGE+L ERELC+ L VSRP LREALRKLEAEKL+ +V HRG Sbjct: 15 LRGHVEGFLREAIMNGRFAPGERLIERELCDYLKVSRPPLREALRKLEAEKLVEIVPHRG 74 Query: 61 PVVSSISVSEARDLYAIRGLLESHAASEFAKLASDDTVAALGVAVKNLNQEAASGDRKRL 120 PVV+S+ ++EAR+LYA+RGLLE AA EFA+LAS + A+ AVKNL+++A++ DR+ L Sbjct: 75 PVVASLDIAEARELYALRGLLEGFAAYEFARLASAKEITAMEKAVKNLHKQASNPDRRAL 134 Query: 121 LAAKADFYDVILNGCGNQLIKEMLLSLLSRINLLRSTSFSHADRLSESLKEIDQLYACIK 180 + AK+ YDV+L GCGN+LI E+L LL+RINLLR+TSFS +RL ESL EID+L IK Sbjct: 135 IQAKSKIYDVLLGGCGNRLITEVLHGLLTRINLLRATSFSRPERLHESLAEIDELLERIK 194 Query: 181 ARNATAAGKAARLHIQNAEKAALDVLSQQQTQ 212 R++ A + A LHI+NAE AA+++L + + Sbjct: 195 DRDSEGAQRMATLHIKNAENAAMEMLESKAAE 226 >ref|YP_001861914.1| GntR family transcriptional regulator [Burkholderia phymatum STM815] gb|ACC74868.1| transcriptional regulator, GntR family [Burkholderia phymatum STM815] Length = 227 Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 124/210 (59%), Positives = 156/210 (74%) Query: 1 LRSQVENYLREAIMNGRFKPGEKLSERELCELLDVSRPSLREALRKLEAEKLITMVLHRG 60 LR QVEN LR+AIM+GRF PG +L ERELCE L VSR S+REALRKLEAEKL+ V H+G Sbjct: 13 LRHQVENVLRQAIMSGRFAPGARLIERELCETLGVSRTSVREALRKLEAEKLVRSVPHKG 72 Query: 61 PVVSSISVSEARDLYAIRGLLESHAASEFAKLASDDTVAALGVAVKNLNQEAASGDRKRL 120 P+V+ +S EA +LYA+RGLLE AA EFA+LASDD +A G A K L +A + D+ + Sbjct: 73 PIVAVMSQQEASELYALRGLLEGFAAHEFARLASDDAIAQFGEAAKELRAQATAHDQAGV 132 Query: 121 LAAKADFYDVILNGCGNQLIKEMLLSLLSRINLLRSTSFSHADRLSESLKEIDQLYACIK 180 L AK YDV+L+ CGN L+KE+L SL SR+NLLR+TS H DRL SL+EID+LY +K Sbjct: 133 LKAKTALYDVLLDNCGNALVKEILNSLYSRVNLLRATSLMHPDRLPSSLREIDKLYKALK 192 Query: 181 ARNATAAGKAARLHIQNAEKAALDVLSQQQ 210 ARNA A + AR H+ NAEKAA+ +L + + Sbjct: 193 ARNADEAQELARQHVANAEKAAMRMLGESE 222 >ref|YP_003907320.1| GntR family transcriptional regulator [Burkholderia sp. CCGE1003] gb|ADN58029.1| transcriptional regulator, GntR family [Burkholderia sp. CCGE1003] Length = 236 Score = 243 bits (619), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 126/215 (58%), Positives = 159/215 (73%) Query: 1 LRSQVENYLREAIMNGRFKPGEKLSERELCELLDVSRPSLREALRKLEAEKLITMVLHRG 60 LR +VEN LR+AIM+GRF PG +L ERELCE L VSR S+REALRKLEAEKL+ V H+G Sbjct: 13 LRHRVENVLRQAIMSGRFAPGARLIERELCETLGVSRTSVREALRKLEAEKLVRNVPHKG 72 Query: 61 PVVSSISVSEARDLYAIRGLLESHAASEFAKLASDDTVAALGVAVKNLNQEAASGDRKRL 120 PVV+ +S +EA +LYA+R LLE AA EFA+LASD+ +A G A K L A + D++ + Sbjct: 73 PVVAVMSRAEAAELYALRALLEGFAAHEFARLASDEAIAEFGSAAKTLRAHATAHDQEGV 132 Query: 121 LAAKADFYDVILNGCGNQLIKEMLLSLLSRINLLRSTSFSHADRLSESLKEIDQLYACIK 180 L AKA YDV+L+ CGN L+KE+L SL SR+NLLR+TS H DRL SL+EID+LY +K Sbjct: 133 LKAKAALYDVLLDHCGNHLVKEILNSLYSRVNLLRATSLMHPDRLPSSLREIDKLYKALK 192 Query: 181 ARNATAAGKAARLHIQNAEKAALDVLSQQQTQPPP 215 AR+A AA + AR H+ NAEKAAL +L +Q P Sbjct: 193 ARDAEAAQQLARQHVLNAEKAALRMLEEQDEDDAP 227 >ref|ZP_02886208.1| transcriptional regulator, GntR family [Burkholderia graminis C4D1M] gb|EDT08336.1| transcriptional regulator, GntR family [Burkholderia graminis C4D1M] Length = 237 Score = 238 bits (608), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 124/209 (59%), Positives = 156/209 (74%) Query: 1 LRSQVENYLREAIMNGRFKPGEKLSERELCELLDVSRPSLREALRKLEAEKLITMVLHRG 60 LR QVEN LR+AIM+GRF PG +L ERELCE L VSR S+REALRKLEAEKL+ V H+G Sbjct: 14 LRHQVENVLRQAIMSGRFAPGARLIERELCETLGVSRTSVREALRKLEAEKLVRNVPHKG 73 Query: 61 PVVSSISVSEARDLYAIRGLLESHAASEFAKLASDDTVAALGVAVKNLNQEAASGDRKRL 120 PVV+ +S EA +LYA+R LLE AA EFA+LASD+ +A G A K L A + D+ + Sbjct: 74 PVVAVMSREEATELYALRALLEGFAAHEFARLASDEAIAQFGDAAKTLRVHATAQDQDGV 133 Query: 121 LAAKADFYDVILNGCGNQLIKEMLLSLLSRINLLRSTSFSHADRLSESLKEIDQLYACIK 180 L AKA YDV+L+ CGN L+KE+L SL SR+NLLR+TS H DRL SL+EID+L+ +K Sbjct: 134 LKAKASLYDVLLDNCGNHLVKEILNSLYSRVNLLRATSLMHPDRLPSSLREIDKLHKALK 193 Query: 181 ARNATAAGKAARLHIQNAEKAALDVLSQQ 209 AR+A AA + AR H+ NAEKAAL +L ++ Sbjct: 194 ARDADAAQQLARQHVLNAEKAALRMLGEE 222 >ref|ZP_06839413.1| transcriptional regulator, GntR family [Burkholderia sp. Ch1-1] gb|EFG72954.1| transcriptional regulator, GntR family [Burkholderia sp. Ch1-1] Length = 222 Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 119/206 (57%), Positives = 154/206 (74%) Query: 1 LRSQVENYLREAIMNGRFKPGEKLSERELCELLDVSRPSLREALRKLEAEKLITMVLHRG 60 LR VEN LR+AI++GRF PG +L ERELCE L VSR S+REALR+LEAEKL+ V H+G Sbjct: 13 LRHHVENVLRQAIVSGRFAPGARLIERELCESLGVSRTSVREALRRLEAEKLVRSVPHKG 72 Query: 61 PVVSSISVSEARDLYAIRGLLESHAASEFAKLASDDTVAALGVAVKNLNQEAASGDRKRL 120 P+V+ +S EA +LYA+RGLLE AA EFA+LA+DD +A G K L EAA+ ++ + Sbjct: 73 PIVAVMSKEEAVELYALRGLLEGFAAHEFARLANDDAIARFGEVAKELRVEAAAQNQAGV 132 Query: 121 LAAKADFYDVILNGCGNQLIKEMLLSLLSRINLLRSTSFSHADRLSESLKEIDQLYACIK 180 L AK YD++L CGN L++E+L SL SRINLLR+TS H +RL +SL+EID+LY +K Sbjct: 133 LRAKTALYDLLLENCGNALVREILNSLYSRINLLRTTSLMHPERLPDSLREIDRLYKALK 192 Query: 181 ARNATAAGKAARLHIQNAEKAALDVL 206 AR+ AA + ARLH+ NAEKAAL +L Sbjct: 193 ARDGEAAQEIARLHVANAEKAALRML 218