BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0114.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06689157.1| branched-chain amino acid ABC superfamily ATP... 409 e-112 ref|YP_003982010.1| inner-membrane translocator [Achromobacter x... 382 e-104 ref|YP_001416467.1| inner-membrane translocator [Xanthobacter au... 324 9e-87 ref|YP_002491943.1| inner-membrane translocator [Anaeromyxobacte... 203 2e-50 ref|YP_002133798.1| inner-membrane translocator [Anaeromyxobacte... 202 4e-50 >ref|ZP_06689157.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] gb|EFF73940.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, permease protein [Achromobacter piechaudii ATCC 43553] Length = 286 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 208/275 (75%), Positives = 245/275 (89%) Query: 1 LIGGVYAVISIGLTLVFGVVGIINFAQSQFLMVGMFIAFFAWKFLGLDPLFGAVLAFAGV 60 L+GGVYAVISIGLTLVFGVV I+NFAQ++FLMVGMF+A+FAWK LGLDPL G++L+FA Sbjct: 12 LLGGVYAVISIGLTLVFGVVSIVNFAQAEFLMVGMFVAYFAWKLLGLDPLIGSLLSFAVA 71 Query: 61 FVLGALIQKYLISRVLKAPEVSQIFLTVGLLIVLENLALIVFGSEFRSVQTAYQTSAWRL 120 FVLG L QK+LI+RVLKAP V+QIFLTVGLLIV+ENLALI+FGSEFRSVQT+YQ +A L Sbjct: 72 FVLGVLTQKFLINRVLKAPAVAQIFLTVGLLIVMENLALILFGSEFRSVQTSYQMTALAL 131 Query: 121 GGLMFNVPYVAAFAVSAVTGLLIWWVLKKTWWGWAVRATSQDVMAAQLVGISPARVHQMA 180 G ++F+ PY+ AF V++V GL +WWVLKKTWWG AVRAT+QD MAA+L GIS RVHQ+A Sbjct: 132 GPILFSAPYLLAFTVASVAGLTLWWVLKKTWWGMAVRATAQDPMAARLSGISTHRVHQLA 191 Query: 181 FGLGVGLTALGGAIILPYLTVSPTIGDQFGVLMFTVVVLGGLGNILGAVVGGLAVGMIQS 240 FGLGVGLTALGG IILPYLT S T+G QF VLMFT VVLGGLG+++GAVVGG+AVG+IQS Sbjct: 192 FGLGVGLTALGGGIILPYLTASTTVGAQFSVLMFTAVVLGGLGSVMGAVVGGIAVGVIQS 251 Query: 241 ISSLVMPIQLQNLALFLIFILVLAVRPEGLLKKAS 275 +SSLV+P+QLQNL LF IFILVLAVRPEGLLK+A+ Sbjct: 252 LSSLVLPMQLQNLVLFAIFILVLAVRPEGLLKRAA 286 >ref|YP_003982010.1| inner-membrane translocator [Achromobacter xylosoxidans A8] gb|ADP19295.1| inner-membrane translocator 63 [Achromobacter xylosoxidans A8] Length = 286 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 207/274 (75%), Positives = 243/274 (88%) Query: 1 LIGGVYAVISIGLTLVFGVVGIINFAQSQFLMVGMFIAFFAWKFLGLDPLFGAVLAFAGV 60 L+GGVYAVISIGLTLVFGVV I+NFAQ++FLMVGMF+A+FAWK LGLDPL G++L+FA Sbjct: 12 LLGGVYAVISIGLTLVFGVVSIVNFAQAEFLMVGMFVAYFAWKLLGLDPLLGSLLSFAVA 71 Query: 61 FVLGALIQKYLISRVLKAPEVSQIFLTVGLLIVLENLALIVFGSEFRSVQTAYQTSAWRL 120 FVLG L QKYLI+RVLKAP V+QIFLTVGLLIV+ENLALI+FGSEFRSVQT YQ +A + Sbjct: 72 FVLGVLTQKYLINRVLKAPAVAQIFLTVGLLIVMENLALILFGSEFRSVQTPYQMTALAV 131 Query: 121 GGLMFNVPYVAAFAVSAVTGLLIWWVLKKTWWGWAVRATSQDVMAAQLVGISPARVHQMA 180 G ++ + PY+ AFAV++V GL +WWVLKKTWWG AVRAT+QD MAA+L GIS RVHQ+A Sbjct: 132 GPILLSAPYLLAFAVASVAGLALWWVLKKTWWGMAVRATAQDPMAARLSGISTHRVHQLA 191 Query: 181 FGLGVGLTALGGAIILPYLTVSPTIGDQFGVLMFTVVVLGGLGNILGAVVGGLAVGMIQS 240 FGLGVG+TALGG IILPYLT S T+G QF VLMFT VVLGGLG+++GAVVGG+AVG+IQS Sbjct: 192 FGLGVGMTALGGGIILPYLTASTTVGAQFSVLMFTAVVLGGLGSVIGAVVGGVAVGVIQS 251 Query: 241 ISSLVMPIQLQNLALFLIFILVLAVRPEGLLKKA 274 +SSL +P+QLQNLALF IFILVLAVRPEGLLK+A Sbjct: 252 LSSLALPMQLQNLALFAIFILVLAVRPEGLLKRA 285 >ref|YP_001416467.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] gb|ABS66810.1| inner-membrane translocator [Xanthobacter autotrophicus Py2] Length = 283 Score = 324 bits (830), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 165/274 (60%), Positives = 217/274 (79%) Query: 1 LIGGVYAVISIGLTLVFGVVGIINFAQSQFLMVGMFIAFFAWKFLGLDPLFGAVLAFAGV 60 L+GGVY VI+ GL+LVFGV+G++NFA ++FLM+GM++A+FAW++LGLDPL G+VL+F V Sbjct: 10 LLGGVYGVIATGLSLVFGVLGVVNFAHAEFLMLGMYVAWFAWRYLGLDPLIGSVLSFVVV 69 Query: 61 FVLGALIQKYLISRVLKAPEVSQIFLTVGLLIVLENLALIVFGSEFRSVQTAYQTSAWRL 120 F +G +Q+ LI RVLKAP +Q+FLTVGL+IV+EN AL+VFGS+FRSV YQ +RL Sbjct: 70 FAVGYGVQRTLIQRVLKAPPAAQVFLTVGLMIVIENAALMVFGSDFRSVSVPYQVEGYRL 129 Query: 121 GGLMFNVPYVAAFAVSAVTGLLIWWVLKKTWWGWAVRATSQDVMAAQLVGISPARVHQMA 180 G + PY+ AF + + +W L ++W G A+RA +QD MAA LVG+ R + +A Sbjct: 130 GDIFIGAPYLYAFIAAVILAAALWLFLDRSWMGRAIRAVAQDPMAATLVGVDTRRTYGLA 189 Query: 181 FGLGVGLTALGGAIILPYLTVSPTIGDQFGVLMFTVVVLGGLGNILGAVVGGLAVGMIQS 240 FGLGV LTA GGA+ILPY+TVSPTIG QF VLMFTVVVLGGLG++ GA+ GG+ VG++QS Sbjct: 190 FGLGVALTAFGGAVILPYITVSPTIGGQFVVLMFTVVVLGGLGSVAGALAGGIMVGIVQS 249 Query: 241 ISSLVMPIQLQNLALFLIFILVLAVRPEGLLKKA 274 +S+LV PIQLQNL LF+IFI VLA+RP+GL+K A Sbjct: 250 LSTLVFPIQLQNLCLFVIFIAVLALRPQGLIKGA 283 >ref|YP_002491943.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] gb|ACL64877.1| inner-membrane translocator [Anaeromyxobacter dehalogenans 2CP-1] Length = 288 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 116/274 (42%), Positives = 185/274 (67%), Gaps = 2/274 (0%) Query: 1 LIGGVYAVISIGLTLVFGVVGIINFAQSQFLMVGMFIAFFAWKFLGLDPLFGAVLAFAGV 60 L+GGVYA+I IGLTL+FGV+ + NFA + LM+GM++A+ A+ L LDP VL + Sbjct: 13 LVGGVYALIGIGLTLIFGVMRVTNFAHGELLMLGMYLAWLAFTGLHLDPFLSIVLVAPAM 72 Query: 61 FVLGALIQKYLISRVLKAPEVSQIFLTVGLLIVLENLALIVFGSEFRSVQTAYQTSAWRL 120 F+ GA +QK ++RVL A +QI LT+GL +++ N +++F S++R + T Y +S+++L Sbjct: 73 FLWGAFLQKSFVNRVLGALPQNQILLTIGLGLIMSNTVMLIFTSDYRILTTTYSSSSYKL 132 Query: 121 GGLMFNVPYVAAFAVS-AVTGLLIWWVLKKTWWGWAVRATSQDVMAAQLVGISPARVHQM 179 GL + P + AF ++ A+TG L W++L KT G A+RAT+QD AAQL+GI+ R+ + Sbjct: 133 AGLSISQPLLYAFLITVAITGALYWFLL-KTDTGQAIRATAQDRDAAQLMGINVRRMSVL 191 Query: 180 AFGLGVGLTALGGAIILPYLTVSPTIGDQFGVLMFTVVVLGGLGNILGAVVGGLAVGMIQ 239 AFG+G L GA+I P + P +G F + F +VVLGG+G+++GA +GG+ +G+ + Sbjct: 192 AFGIGSALAGTAGALISPTYYIFPQVGSAFTLKAFVIVVLGGMGSVVGATLGGIIIGVAE 251 Query: 240 SISSLVMPIQLQNLALFLIFILVLAVRPEGLLKK 273 S+S++ + L+ L F++F+ +L +P GLL K Sbjct: 252 SLSAVYIASGLKELVTFVLFLALLLFKPAGLLGK 285 >ref|YP_002133798.1| inner-membrane translocator [Anaeromyxobacter sp. K] gb|ACG72669.1| inner-membrane translocator [Anaeromyxobacter sp. K] Length = 288 Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 115/274 (41%), Positives = 185/274 (67%), Gaps = 2/274 (0%) Query: 1 LIGGVYAVISIGLTLVFGVVGIINFAQSQFLMVGMFIAFFAWKFLGLDPLFGAVLAFAGV 60 L+GGVYA+I IGLTL+FGV+ + NFA + LM+GM++A+ A+ L +DP VL + Sbjct: 13 LVGGVYALIGIGLTLIFGVMRVTNFAHGELLMLGMYLAWLAFTGLHIDPFLSIVLVAPAM 72 Query: 61 FVLGALIQKYLISRVLKAPEVSQIFLTVGLLIVLENLALIVFGSEFRSVQTAYQTSAWRL 120 F+ GA +QK ++RVL A +QI LT+GL +++ N +++F S++R + T Y +S+++L Sbjct: 73 FLWGAFLQKSFVNRVLGALPQNQILLTIGLGLIMSNTVMLIFTSDYRILTTTYSSSSYKL 132 Query: 121 GGLMFNVPYVAAFAVS-AVTGLLIWWVLKKTWWGWAVRATSQDVMAAQLVGISPARVHQM 179 GL + P + AF ++ A+TG L W++L KT G A+RAT+QD AAQL+GI+ R+ + Sbjct: 133 AGLSISQPLLYAFLITVAITGALYWFLL-KTDTGQAIRATAQDRDAAQLMGINVRRMSVL 191 Query: 180 AFGLGVGLTALGGAIILPYLTVSPTIGDQFGVLMFTVVVLGGLGNILGAVVGGLAVGMIQ 239 AFG+G L GA+I P + P +G F + F +VVLGG+G+++GA +GG+ +G+ + Sbjct: 192 AFGIGSALAGTAGALISPTYYIFPQVGSAFTLKAFVIVVLGGMGSVVGATLGGIIIGVAE 251 Query: 240 SISSLVMPIQLQNLALFLIFILVLAVRPEGLLKK 273 S+S++ + L+ L F++F+ +L +P GLL K Sbjct: 252 SLSAVYIASGLKELVTFVLFLALLLFKPAGLLGK 285