BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0112.p (255 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06689159.1| branched-chain amino acid ABC superfamily ATP... 355 4e-96 ref|YP_003982012.1| ABC transporter [Achromobacter xylosoxidans ... 352 3e-95 ref|YP_001416469.1| ABC transporter-like protein [Xanthobacter a... 280 2e-73 ref|YP_003401563.1| ABC transporter [Archaeoglobus profundus DSM... 233 2e-59 ref|YP_003450608.1| branched-chain amino acid transport system A... 232 4e-59 >ref|ZP_06689159.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] gb|EFF73942.1| branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein [Achromobacter piechaudii ATCC 43553] Length = 246 Score = 355 bits (911), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 176/237 (74%), Positives = 200/237 (84%) Query: 14 FLEVSHVTRRFGGLTAVNDVSFSVNRGDIIGLIGPNGAGKTTLFNLLVGLTKPNQGQVVL 73 L+VS+V RRFGGL AV++VSFSV RGDI+GLIGPNGAGKTTLFNLLVGL G++ L Sbjct: 4 ILKVSNVQRRFGGLKAVDNVSFSVARGDILGLIGPNGAGKTTLFNLLVGLYASQGGRIEL 63 Query: 74 DGVSIGGSKPSRIATAGMTKTFQNVALFAEMTVLDNVLVGGLLRHSVEDARALAEKNLAR 133 DG + G +P +IA GMTKTFQNVALF EMTVLDNVLVGGLLRH V AR LA NL R Sbjct: 64 DGEDVSGLRPHQIAARGMTKTFQNVALFPEMTVLDNVLVGGLLRHDVPRARQLARDNLDR 123 Query: 134 VGLAAIAGKKAGDLSFPERARVEMARALCTGPKLLLLDEVMAALNETEMDALLELIRSLR 193 VG++AIA K AG+LSFPE+ARVE+ARALCT PK+ LLDEVMAALNETEMDALL+LIR+LR Sbjct: 124 VGVSAIAAKPAGELSFPEQARVELARALCTDPKVFLLDEVMAALNETEMDALLDLIRTLR 183 Query: 194 DNEGLTFIVVEHHMRAIMNLCNRIIVLCFGQKIAEGTPADIASDPAVIDAYLGSSID 250 D G+TFIVVEHHMRAIM LCNRI+VL FGQKIAEG+PA IASDP VI+ YLG S++ Sbjct: 184 DEAGITFIVVEHHMRAIMRLCNRILVLSFGQKIAEGSPAAIASDPTVIEVYLGKSME 240 >ref|YP_003982012.1| ABC transporter [Achromobacter xylosoxidans A8] gb|ADP19297.1| ABC transporter family protein 96 [Achromobacter xylosoxidans A8] Length = 246 Score = 352 bits (903), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 179/243 (73%), Positives = 203/243 (83%), Gaps = 1/243 (0%) Query: 14 FLEVSHVTRRFGGLTAVNDVSFSVNRGDIIGLIGPNGAGKTTLFNLLVGLTKPNQGQVVL 73 L+VSHV RRFGGL AV+DVSF+V RGDI+GLIGPNGAGKTTLFNLLVGL + N G++ L Sbjct: 4 ILKVSHVQRRFGGLKAVDDVSFNVARGDILGLIGPNGAGKTTLFNLLVGLYRGNGGRIEL 63 Query: 74 DGVSIGGSKPSRIATAGMTKTFQNVALFAEMTVLDNVLVGGLLRHSVEDARALAEKNLAR 133 +G I G +P +IA GMTKTFQNVALF EMTVLDNVLVGGLLRH V AR LA NL R Sbjct: 64 EGRDISGLRPHQIAGLGMTKTFQNVALFPEMTVLDNVLVGGLLRHDVGRARRLALDNLDR 123 Query: 134 VGLAAIAGKKAGDLSFPERARVEMARALCTGPKLLLLDEVMAALNETEMDALLELIRSLR 193 V LA IA K AG+LSFPE+ARVE+ARALCT PK+ LLDEVMAALNE+EMDALL+LIR+LR Sbjct: 124 VDLAGIARKPAGELSFPEQARVELARALCTDPKVFLLDEVMAALNESEMDALLDLIRTLR 183 Query: 194 DNEGLTFIVVEHHMRAIMNLCNRIIVLCFGQKIAEGTPADIASDPAVIDAYLGSSID-TE 252 D G+TFIVVEHHMRAIM LCNRI+VL FGQKIAEG+PA IA+DP VI+ YLG S++ E Sbjct: 184 DESGITFIVVEHHMRAIMRLCNRILVLSFGQKIAEGSPAQIAADPTVIEVYLGKSLEQVE 243 Query: 253 VSA 255 V A Sbjct: 244 VPA 246 >ref|YP_001416469.1| ABC transporter-like protein [Xanthobacter autotrophicus Py2] gb|ABS66812.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 246 Score = 280 bits (715), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 138/233 (59%), Positives = 180/233 (77%), Gaps = 1/233 (0%) Query: 14 FLEVSHVTRRFGGLTAVNDVSFSVNRGDIIGLIGPNGAGKTTLFNLLVGLTKPNQGQVVL 73 L+ + FGGL AV+ VSFS+ G+IIGLIGPNGAGKTTLFN LVGL G+VVL Sbjct: 4 LLQADAIAVTFGGLKAVDGVSFSLKAGEIIGLIGPNGAGKTTLFNALVGLQPLTSGKVVL 63 Query: 74 DGVSIGGSKPSRIATAGMTKTFQNVALFAEMTVLDNVLVGGLLRHSVEDARALAEKNLAR 133 DG ++ G KP ++A GMTKTFQN ALF +M+V++NV+ LLRH + ARA AE+ L + Sbjct: 64 DGDTVSGLKPHKVAAKGMTKTFQNAALFPDMSVVENVMTAALLRHDLAGARATAERVLDK 123 Query: 134 VGLAAIAGKKAGDLSFPERARVEMARALCTGPKLLLLDEVMAALNETEMDALLELIRSLR 193 +GL+ IA DL+FP++A VEMARAL T P++LLLDEVMAAL EMD ++ +IR+L+ Sbjct: 124 LGLSPIAEADVADLTFPQKALVEMARALATEPRVLLLDEVMAALTPNEMDEVMGVIRALK 183 Query: 194 DNEGLTFIVVEHHMRAIMNLCNRIIVLCFGQKIAEGTPADIASDPAVIDAYLG 246 EGL+F+VVEHHMRAIM LC+R++V+ FG+ IA+GTPA++A+DPAVI+AYLG Sbjct: 184 -AEGLSFLVVEHHMRAIMALCDRLLVVNFGRLIAQGTPAEVAADPAVIEAYLG 235 >ref|YP_003401563.1| ABC transporter [Archaeoglobus profundus DSM 5631] gb|ADB58890.1| ABC transporter related protein [Archaeoglobus profundus DSM 5631] Length = 247 Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 118/238 (49%), Positives = 168/238 (70%), Gaps = 4/238 (1%) Query: 14 FLEVSHVTRRFGGLTAVNDVSFSVNRGDIIGLIGPNGAGKTTLFNLLVGLTKPNQGQVVL 73 L+V VT+RFGGL A+++VSF V R +I+G+IGPNGAGKTTLFN++ G+ KP +G+V+ Sbjct: 2 ILKVEGVTKRFGGLVALDNVSFEVKRKEIVGIIGPNGAGKTTLFNVISGVYKPEEGRVIF 61 Query: 74 DGVSIGGSKPSRIATAGMTKTFQNVALFAEMTVLDNVLVG---GLLRHSVEDARALAEKN 130 +G I G P +IA G+ +TFQ V +E++V +NV+VG G +E A +A+ Sbjct: 62 NGKDITGLPPFKIARLGIARTFQIVKPLSELSVKENVMVGACFGKEYMDLESAEKIADDV 121 Query: 131 LARVGLAAIAGKKAGDLSFPERARVEMARALCTGPKLLLLDEVMAALNETEMDALLELIR 190 L V L A AG L+ PE+ R+E+ARAL + P LLLLDEV+A LN E+ ++E+IR Sbjct: 122 LKLVKLNEKADLPAGKLNVPEKKRLELARALASKPDLLLLDEVLAGLNPAEVSEMIEIIR 181 Query: 191 SLRDNEGLTFIVVEHHMRAIMNLCNRIIVLCFGQKIAEGTPADIASDPAVIDAYLGSS 248 +RD+ G+T +++EH M AIMN+ +R+IVL +G+KIAEG P D+A+DP VI+AYLG Sbjct: 182 DIRDS-GITILMIEHLMHAIMNVSDRVIVLDYGKKIAEGKPEDVANDPKVIEAYLGDP 238 >ref|YP_003450608.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] dbj|BAI74064.1| branched-chain amino acid transport system ATP-binding protein [Azospirillum sp. B510] Length = 242 Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 118/236 (50%), Positives = 167/236 (70%), Gaps = 1/236 (0%) Query: 14 FLEVSHVTRRFGGLTAVNDVSFSVNRGDIIGLIGPNGAGKTTLFNLLVGLTKPNQGQVVL 73 LE+ +++RF GL AV++V FSV G I+ LIGPNGAGKTT FNL+ G+ P++G+V L Sbjct: 4 LLEIERLSKRFRGLKAVSEVGFSVPEGCILALIGPNGAGKTTTFNLIAGVFPPDEGRVTL 63 Query: 74 DGVSIGGSKPSRIATAGMTKTFQNVALFAEMTVLDNVLVGGLLR-HSVEDARALAEKNLA 132 G ++ G KP+ + AG+ +TFQ V F ++TV DNV+VG L R SVE AR A L Sbjct: 64 KGRNLTGLKPNLVCAAGIGRTFQIVKPFGQLTVEDNVVVGALARERSVEAARIQARVVLE 123 Query: 133 RVGLAAIAGKKAGDLSFPERARVEMARALCTGPKLLLLDEVMAALNETEMDALLELIRSL 192 R+ LA A + A L+ P+R R+E+ARAL T P LLLLDEV+A L TE+D ++E++R L Sbjct: 124 RLELADQANRPARSLTLPDRKRLEVARALATRPTLLLLDEVLAGLRPTEVDRMVEVLRDL 183 Query: 193 RDNEGLTFIVVEHHMRAIMNLCNRIIVLCFGQKIAEGTPADIASDPAVIDAYLGSS 248 EGLT +++EH MRA+M L +R++VL G+KIA+G PA++ +DP V+++YLG+ Sbjct: 184 NRREGLTILMIEHVMRAVMALSDRVVVLDHGEKIADGVPAEVVADPRVVESYLGAE 239