BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0034.0108.p (417 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003166900.1| L-carnitine dehydratase/bile acid-inducible ... 489 e-136 ref|YP_003320048.1| L-carnitine dehydratase/bile acid-inducible ... 488 e-135 ref|ZP_06972318.1| L-carnitine dehydratase/bile acid-inducible p... 484 e-134 ref|YP_713621.1| putative alpha-methylacyl-CoA racemase [Frankia... 477 e-132 ref|NP_542054.1| alpha-methylacyl-CoA racemase [Brucella meliten... 467 e-129 >ref|YP_003166900.1| L-carnitine dehydratase/bile acid-inducible protein F [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gb|ACV34971.1| L-carnitine dehydratase/bile acid-inducible protein F [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 392 Score = 489 bits (1258), Expect = e-136, Method: Compositional matrix adjust. Identities = 232/392 (59%), Positives = 288/392 (73%) Query: 26 MKPLEGIKVVSLEQAIAAPFASRQLGELGARVIKVERPGVGDFARAYDDKVRGMSSQFMW 85 M+PL+GI VV+LE AIAAPF +RQL +LGARVIKVERP GDFARAYD++VRG++S F+W Sbjct: 1 MRPLDGITVVTLEHAIAAPFCTRQLADLGARVIKVERPVTGDFARAYDERVRGLASHFVW 60 Query: 86 TNRSKESITLDLKEAEGLEVLKRLLADADVFIQNLAPGAIARLGLSDEVLRAEFPQLIIC 145 TNRSKES+TLD+K AE +L RLL ADV +QNLAPGA ARLGLS EVLR + P+LI+C Sbjct: 61 TNRSKESLTLDVKHAEAAGILARLLEQADVLVQNLAPGAAARLGLSYEVLREQHPRLIVC 120 Query: 146 HISGYGRSGPYANKKAYDLLVQCELGVPGINGTPGGQAKIGIAVADIATGMYAYSGILTS 205 ISGYG SGPY +KKAYDLL+Q E G I G+P AK G ++ADIA GMYAYS IL + Sbjct: 121 DISGYGASGPYRDKKAYDLLIQSESGFLSITGSPDAPAKAGCSIADIAAGMYAYSNILAA 180 Query: 206 LIQRGRTGKGVIFEVSLFDALAEWMSYPIYYQKYGGVDLPRTGTRHSAISPYGPFKASDG 265 L+QRGR+G+G EVS+ +++ EWMSYP+YY G PR G H+ I+PYGPF A DG Sbjct: 181 LLQRGRSGRGCHIEVSMLESMVEWMSYPLYYAFDGATPPPRAGAAHATITPYGPFTAGDG 240 Query: 266 KEVFLGIQNEREWKNFCDQVLLAPQVATDPRFINNSLRVVNRDALEALVAQHFQRFDSEQ 325 K V LG+QNEREW+ FC VL P++A DPRF ++S R NR LEAL+ F SEQ Sbjct: 241 KTVMLGLQNEREWEVFCRAVLERPELAADPRFSSSSRRTANRQELEALIVASFASLSSEQ 300 Query: 326 AIARLESAGIANARLNSIMELLSHPQFTQRGRWRQVDSPVGPVEMLLPPVTSDDFEPQLG 385 I RL++A IANAR+N + ++ HPQ RGRW +V +P GP+ LLPP D F P++ Sbjct: 301 LIGRLDAAQIANARMNDMHDVWEHPQLRARGRWAEVATPAGPIPALLPPGAVDAFTPRMD 360 Query: 386 AVPAVGQHTDSVLAALGFDSAAIAALRDKHII 417 AVPA+GQHTD++L LG+D+AAI LR I Sbjct: 361 AVPALGQHTDAILGELGWDAAAIERLRQAGAI 392 >ref|YP_003320048.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphaerobacter thermophilus DSM 20745] gb|ACZ39226.1| L-carnitine dehydratase/bile acid-inducible protein F [Sphaerobacter thermophilus DSM 20745] Length = 392 Score = 488 bits (1255), Expect = e-135, Method: Compositional matrix adjust. Identities = 228/392 (58%), Positives = 286/392 (72%) Query: 26 MKPLEGIKVVSLEQAIAAPFASRQLGELGARVIKVERPGVGDFARAYDDKVRGMSSQFMW 85 M PLEGI VV+LEQA+AAPFA+RQL +LGARVIK+ERPG GDFAR YD VRG+S+ F+W Sbjct: 1 MLPLEGITVVALEQAVAAPFATRQLADLGARVIKIERPGSGDFARGYDAAVRGLSAYFVW 60 Query: 86 TNRSKESITLDLKEAEGLEVLKRLLADADVFIQNLAPGAIARLGLSDEVLRAEFPQLIIC 145 NR KES+TL+LK EG+ +L LLA ADVF+ NLAPGA+ RLG E +RA +P+LI C Sbjct: 61 LNRGKESLTLNLKHPEGVRILDGLLAGADVFVHNLAPGAVERLGFGAETVRARYPRLITC 120 Query: 146 HISGYGRSGPYANKKAYDLLVQCELGVPGINGTPGGQAKIGIAVADIATGMYAYSGILTS 205 +SGYG SGPY +KKAYDLL+QCE G+ + GTP ++ GI+VADIA GMYAYSGIL + Sbjct: 121 AVSGYGSSGPYRDKKAYDLLIQCETGLVSVTGTPEAPSRAGISVADIAGGMYAYSGILAA 180 Query: 206 LIQRGRTGKGVIFEVSLFDALAEWMSYPIYYQKYGGVDLPRTGTRHSAISPYGPFKASDG 265 L QR RTG+G EVSLFDAL EWMS+P+Y Y G R+ H I+PYGP+ A DG Sbjct: 181 LYQRERTGEGAALEVSLFDALGEWMSHPMYTTAYTGQQPVRSAASHPTIAPYGPYPAGDG 240 Query: 266 KEVFLGIQNEREWKNFCDQVLLAPQVATDPRFINNSLRVVNRDALEALVAQHFQRFDSEQ 325 V L IQNEREW FC+ VL P+VATDPRF N RV NR AL ++ F +++ Sbjct: 241 ALVHLSIQNEREWVRFCEVVLEQPEVATDPRFATNPDRVANRKALAEVIEAAFGGLSADE 300 Query: 326 AIARLESAGIANARLNSIMELLSHPQFTQRGRWRQVDSPVGPVEMLLPPVTSDDFEPQLG 385 + RLE AGIANAR+ ++ E + HPQ R RW ++DSPVGP+ LLPPV + P +G Sbjct: 301 VVERLERAGIANARMRTVQEFIDHPQLAARDRWTEIDSPVGPLRALLPPVVMEGVTPAMG 360 Query: 386 AVPAVGQHTDSVLAALGFDSAAIAALRDKHII 417 A+PA+G HTD++LA LG+D+AAIA LRD+ ++ Sbjct: 361 AIPALGAHTDAILATLGYDAAAIARLRDEGVV 392 >ref|ZP_06972318.1| L-carnitine dehydratase/bile acid-inducible protein F [Ktedonobacter racemifer DSM 44963] gb|EFH85038.1| L-carnitine dehydratase/bile acid-inducible protein F [Ktedonobacter racemifer DSM 44963] Length = 392 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 225/392 (57%), Positives = 286/392 (72%) Query: 26 MKPLEGIKVVSLEQAIAAPFASRQLGELGARVIKVERPGVGDFARAYDDKVRGMSSQFMW 85 M PLEGI VV+LEQA+AAPFA+RQL +LGARVIK+ERP VGDFAR YD KV GM+S F+W Sbjct: 1 MLPLEGITVVALEQAVAAPFATRQLADLGARVIKIERPEVGDFARGYDAKVNGMASYFVW 60 Query: 86 TNRSKESITLDLKEAEGLEVLKRLLADADVFIQNLAPGAIARLGLSDEVLRAEFPQLIIC 145 NRSKES+TLDLK E+L ++L+ ADVFI NLAPGA+ RLG + L +P+LI C Sbjct: 61 LNRSKESLTLDLKHPAAQEILHQVLSGADVFIHNLAPGAVERLGFGVDELHRRYPRLIQC 120 Query: 146 HISGYGRSGPYANKKAYDLLVQCELGVPGINGTPGGQAKIGIAVADIATGMYAYSGILTS 205 ISGYG SGPYA KKAYDLL+QCE G+ + GTP AK+GI+VADI+ GMYAYSGIL + Sbjct: 121 SISGYGTSGPYAEKKAYDLLIQCETGLLSVTGTPEAPAKVGISVADISAGMYAYSGILLA 180 Query: 206 LIQRGRTGKGVIFEVSLFDALAEWMSYPIYYQKYGGVDLPRTGTRHSAISPYGPFKASDG 265 L QR TG+GV FEVSLF++L EWM+ P Y+ Y G PRTG H++++PYGPF+ D Sbjct: 181 LYQRAHTGEGVHFEVSLFESLGEWMAQPAYFAAYSGNPPPRTGASHASVAPYGPFRTQDE 240 Query: 266 KEVFLGIQNEREWKNFCDQVLLAPQVATDPRFINNSLRVVNRDALEALVAQHFQRFDSEQ 325 K +FLG+QNEREW+ FC++VL P+++ D RF N+ RV NR+AL+ + F R +EQ Sbjct: 241 KTIFLGVQNEREWQAFCERVLEQPELSADERFCTNTRRVTNREALDTTILGAFSRLTAEQ 300 Query: 326 AIARLESAGIANARLNSIMELLSHPQFTQRGRWRQVDSPVGPVEMLLPPVTSDDFEPQLG 385 RLE A IA ARLNS+ E HPQ R RWR+VDSPVG + LLPP+T + EP++ Sbjct: 301 ITVRLEEARIATARLNSLQEFWEHPQLQARQRWREVDSPVGQMRALLPPITMQNVEPRMD 360 Query: 386 AVPAVGQHTDSVLAALGFDSAAIAALRDKHII 417 +PAVG+HT+++L LG+ IA L + +I Sbjct: 361 PIPAVGEHTEAILRTLGYSEERIAQLHTEAVI 392 >ref|YP_713621.1| putative alpha-methylacyl-CoA racemase [Frankia alni ACN14a] emb|CAJ62056.1| putative alpha-methylacyl-CoA racemase [Frankia alni ACN14a] Length = 423 Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust. Identities = 226/388 (58%), Positives = 286/388 (73%) Query: 25 AMKPLEGIKVVSLEQAIAAPFASRQLGELGARVIKVERPGVGDFARAYDDKVRGMSSQFM 84 A KPL GI VVS+EQA+AAPFA+RQL +LGARVIK+ERPG GDFAR YD+ V+G++S F+ Sbjct: 31 AGKPLAGITVVSIEQAVAAPFATRQLADLGARVIKIERPGAGDFARGYDETVKGLASYFV 90 Query: 85 WTNRSKESITLDLKEAEGLEVLKRLLADADVFIQNLAPGAIARLGLSDEVLRAEFPQLII 144 W NR+KES+TLDLK E EVL LLA ADVF+QNLAPGA ARLGL LRA P++I+ Sbjct: 91 WLNRAKESLTLDLKHPEAREVLAGLLAGADVFVQNLAPGAAARLGLDAATLRARDPRMIV 150 Query: 145 CHISGYGRSGPYANKKAYDLLVQCELGVPGINGTPGGQAKIGIAVADIATGMYAYSGILT 204 C +SGYG +GP +KKAYDLL+QCE G+ + G P AK+GI+VADI+ GMYAY+ +LT Sbjct: 151 CDVSGYGSAGPLRDKKAYDLLIQCETGLLSVTGAPDAPAKVGISVADISAGMYAYTAVLT 210 Query: 205 SLIQRGRTGKGVIFEVSLFDALAEWMSYPIYYQKYGGVDLPRTGTRHSAISPYGPFKASD 264 +L R RTG+G EVSLFD+L EWM+ P+YY Y GV RTGT H++I+PYG F+ D Sbjct: 211 ALFMRERTGEGAALEVSLFDSLTEWMAQPMYYAMYTGVPPARTGTSHASIAPYGGFRTGD 270 Query: 265 GKEVFLGIQNEREWKNFCDQVLLAPQVATDPRFINNSLRVVNRDALEALVAQHFQRFDSE 324 G V LG+QNEREW+ FC++VL P++ DPR+ N+ RV +RDAL A V +E Sbjct: 271 GGSVQLGVQNEREWRRFCEEVLRRPELLADPRYTTNAGRVRHRDALTADVEAALAEVSTE 330 Query: 325 QAIARLESAGIANARLNSIMELLSHPQFTQRGRWRQVDSPVGPVEMLLPPVTSDDFEPQL 384 Q +ARL AGIAN R+N+I +LL+HPQ RWR+VDSPVGP+ + PPV +P + Sbjct: 331 QTLARLNEAGIANGRINTIGDLLAHPQLDVGDRWREVDSPVGPLRAVRPPVRISGVDPVM 390 Query: 385 GAVPAVGQHTDSVLAALGFDSAAIAALR 412 G VPAVG+HTD++LA LG+D A A LR Sbjct: 391 GPVPAVGEHTDALLAELGYDPADTARLR 418 >ref|NP_542054.1| alpha-methylacyl-CoA racemase [Brucella melitensis bv. 1 str. 16M] ref|NP_699368.1| CAIB/BAIF family protein [Brucella suis 1330] ref|YP_222966.1| CAIB/BAIF family protein [Brucella abortus bv. 1 str. 9-941] ref|YP_418395.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis biovar Abortus 2308] ref|YP_001594133.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella canis ATCC 23365] ref|YP_001622011.1| hypothetical protein BSUIS_B0169 [Brucella suis ATCC 23445] ref|YP_001932119.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus S19] ref|ZP_03786670.1| alpha-methylacyl-CoA racemase [Brucella ceti str. Cudo] ref|YP_002733995.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis ATCC 23457] ref|ZP_04595667.1| alpha-methylacyl-CoA racemase [Brucella abortus str. 2308 A] ref|YP_003104961.1| CAIB/BAIF family protein [Brucella microti CCM 4915] ref|ZP_05465386.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis bv. 2 str. 63/9] ref|ZP_05820173.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus NCTC 8038] ref|ZP_05834799.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis bv. 1 str. 16M] ref|ZP_05838974.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella suis bv. 4 str. 40] ref|ZP_05869364.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 6 str. 870] ref|ZP_05871960.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 4 str. 292] ref|ZP_05875186.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 2 str. 86/8/59] ref|ZP_05894440.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 9 str. C68] ref|ZP_05929950.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 3 str. Tulya] ref|ZP_05934310.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella ceti B1/94] ref|ZP_05962763.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella neotomae 5K33] ref|ZP_05993624.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella suis bv. 5 str. 513] ref|ZP_05996875.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella suis bv. 3 str. 686] ref|ZP_06102078.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis bv. 1 str. Rev.1] ref|ZP_06105937.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis bv. 3 str. Ether] ref|ZP_06109182.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella ceti M490/95/1] ref|ZP_06793858.1| alpha-methylacyl-CoA racemase [Brucella sp. NVSL 07-0026] ref|ZP_06933645.1| alpha-methylacyl-CoA racemase [Brucella abortus bv. 5 str. B3196] gb|AAL54318.1| alpha-methylacyl-CoA racemase [Brucella melitensis bv. 1 str. 16M] gb|AAN33373.1| CAIB/BAIF family protein [Brucella suis 1330] gb|AAX75605.1| CAIB/BAIF family protein [Brucella abortus bv. 1 str. 9-941] emb|CAJ12328.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis biovar Abortus 2308] gb|ABX63362.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella canis ATCC 23365] gb|ABY39189.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gb|ACD73673.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus S19] gb|EEH13530.1| alpha-methylacyl-CoA racemase [Brucella ceti str. Cudo] gb|ACO02041.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis ATCC 23457] gb|EEP61704.1| alpha-methylacyl-CoA racemase [Brucella abortus str. 2308 A] gb|ACU49299.1| CAIB/BAIF family protein [Brucella microti CCM 4915] gb|EEW81497.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus NCTC 8038] gb|EEW87050.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis bv. 1 str. 16M] gb|EEW90251.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella suis bv. 4 str. 40] gb|EEX56870.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 4 str. 292] gb|EEX60096.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 2 str. 86/8/59] gb|EEX63945.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 6 str. 870] gb|EEX79423.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 9 str. C68] gb|EEX84137.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella abortus bv. 3 str. Tulya] gb|EEX85266.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella ceti B1/94] gb|EEY03043.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella neotomae 5K33] gb|EEY27594.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella suis bv. 5 str. 513] gb|EEY30845.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella suis bv. 3 str. 686] gb|EEZ07083.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella ceti M490/95/1] gb|EEZ10282.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis bv. 3 str. Ether] gb|EEZ12880.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis bv. 1 str. Rev.1] gb|EEZ16898.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis bv. 2 str. 63/9] gb|EFG35841.1| alpha-methylacyl-CoA racemase [Brucella sp. NVSL 07-0026] gb|EFH33177.1| alpha-methylacyl-CoA racemase [Brucella abortus bv. 5 str. B3196] gb|ADZ67409.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis M28] gb|ADZ88277.1| L-carnitine dehydratase/bile acid-inducible protein F [Brucella melitensis M5-90] gb|AEM19650.1| CAIB/BAIF family protein [Brucella suis 1330] Length = 405 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 224/393 (56%), Positives = 281/393 (71%) Query: 25 AMKPLEGIKVVSLEQAIAAPFASRQLGELGARVIKVERPGVGDFARAYDDKVRGMSSQFM 84 A++PL+GI VVSLE AIAAPFA+RQL +LGARVIKVERPGVGDFARAYDD+V GM+S F+ Sbjct: 13 ALRPLDGITVVSLEHAIAAPFATRQLADLGARVIKVERPGVGDFARAYDDRVNGMASHFV 72 Query: 85 WTNRSKESITLDLKEAEGLEVLKRLLADADVFIQNLAPGAIARLGLSDEVLRAEFPQLII 144 W NRSKES+ +DLK + +L L++ ADV +QNLAPGA ARLGLS E LRA+ P LI+ Sbjct: 73 WCNRSKESLAIDLKHPDARGILHDLVSKADVLVQNLAPGAAARLGLSAEALRADCPHLIV 132 Query: 145 CHISGYGRSGPYANKKAYDLLVQCELGVPGINGTPGGQAKIGIAVADIATGMYAYSGILT 204 C ISGYG GPY ++KAYDLL+Q E G + GTP QAK GI++ADIA GMYAYSGIL+ Sbjct: 133 CDISGYGSDGPYRDRKAYDLLIQSEAGFLSVTGTPDEQAKAGISIADIAAGMYAYSGILS 192 Query: 205 SLIQRGRTGKGVIFEVSLFDALAEWMSYPIYYQKYGGVDLPRTGTRHSAISPYGPFKASD 264 +L+ R RTG+G EVS+ +AL EWM +P+YY G PRTG H+ I PYGPF D Sbjct: 193 ALLMRERTGQGSHIEVSMLEALGEWMGFPLYYTYGGKEPPPRTGASHATIFPYGPFPTGD 252 Query: 265 GKEVFLGIQNEREWKNFCDQVLLAPQVATDPRFINNSLRVVNRDALEALVAQHFQRFDSE 324 GK V LG+QNEREW FC++VL P +A D RF++N LRV NRDAL ++ F ++E Sbjct: 253 GKTVMLGLQNEREWAIFCEKVLHQPALAQDERFVSNVLRVRNRDALTEIIVASFAASNAE 312 Query: 325 QAIARLESAGIANARLNSIMELLSHPQFTQRGRWRQVDSPVGPVEMLLPPVTSDDFEPQL 384 +L+ AGIANAR+ ++ E+ HPQ RGRW ++ +P G V LLPP + EP++ Sbjct: 313 AITMQLDEAGIANARVRTMAEVWDHPQLQARGRWTEITTPAGQVPALLPPAFPNGMEPRM 372 Query: 385 GAVPAVGQHTDSVLAALGFDSAAIAALRDKHII 417 VPA+G H S+L LG D A IAALR+ I Sbjct: 373 DPVPALGAHNISILTELGLDEAQIAALREAGAI 405